Silkworm Genome Informatics Database

Gene

KWMTBOMO07506

Pre Gene Modal

BGIBMGA005898

Annotation

mod(mdg4)_protein_[Helicoverpa_armigera]

Location

Bomo_Chr12(-):15230973-15236227 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.569

CDS

ATGGCTCAACCATCTTTATCGGTGTCCTGGGATGCATACCAAAATAGTATATGCCGCGGTCTTAGTACACTTCAACAACGCGGTGAATTTGTGGACATGACATTGGCTGCAGATGGGCATATGGTGCGAGTGCATCGCATGGTGATGTCTCTCATAAGTCCTTACATCAAGCAGTTGATTGCCTCTGCAGATTGTCAACATCCAGTCATATTTCTCAATCAAGTATCATATAAAACATTATCCTCGATATTAGATTATGCTTATACCGGAGTAGTTCAAGTTCCTAATGAAGAACTGAATGCTTTTATTGTAGCTGGGAAAGCACTTCACATTAGAGGAATCGTTGATATGAATATTGATCATACATTACCCATGCTGAATGCTCGTTCGGTTGTTCAGATTCAAAACTCTGTATCAAATTCTAGCACAGCAGCAAAAGAAAATAGAGAGAAAACCGAGTCCAGTAATTCACCGAAAAAAGAATCTTCAGCACCAGAAATTTCCAGAGTATTCGTTAACGAGAGCTCCCTTGACGATGATATGGATGCATCGAATTATGACGACGTGCTGGATCAAGATTACAGTAAAACGAAATATTCTAAGACTGCAAAGGCAAAAGAAAGTACAAACAAAAAAGATCAACCACCGAGCATGCAGTATTCAGTATCAAACCAGGGCAACTTACAAATGGTTTTAAATCGTTATCTATATTACTTGGTGTATACGGGACGAAATTCAGGACATCGGAGGTGGCAATGTATCGATAATCATTCGAAGAGAACTAAATGTCAAGCTGCTGTTGTTACCAAAAATAATGTTATTGTACAAAGGATATCGGCTCACAATCATTCGTTCCACGACGCTAAGATTCTAAGGAAAGTGCAAAACGGCACAGTGTTCTCTGGCATACAACAAGCTGAAGATATGGGTAAAATGATGGTAGAAGAACGAGGACGCTCTGGCGCCGGAAGTCAAGATGATTCGGAAGCTAAATAA

Protein

MAQPSLSVSWDAYQNSICRGLSTLQQRGEFVDMTLAADGHMVRVHRMVMSLISPYIKQLIASADCQHPVIFLNQVSYKTLSSILDYAYTGVVQVPNEELNAFIVAGKALHIRGIVDMNIDHTLPMLNARSVVQIQNSVSNSSTAAKENREKTESSNSPKKESSAPEISRVFVNESSLDDDMDASNYDDVLDQDYSKTKYSKTAKAKESTNKKDQPPSMQYSVSNQGNLQMVLNRYLYYLVYTGRNSGHRRWQCIDNHSKRTKCQAAVVTKNNVIVQRISAHNHSFHDAKILRKVQNGTVFSGIQQAEDMGKMMVEERGRSGAGSQDDSEAK

Uniprot

H9J8Q6 A0A1E1W6C7 A0A2A4JH22 A0A2H1VSC0 J9QBN1 A0A2A4JGG4 + More
A0A2A4K9T4 A0A2A4JI35 A0A0N1IEB4 A0A1E1WN00 A0A2H1VAN7 A0A2A4JG78 A0A2H1VZ89 A0A212EHW9 S4NN21 A0A212EHU3 S4PLX9 A0A2H1WEX0 A0A1Y1K4D4 A0A0T6B6S9 A0A194PIC4

Pubmed

19121390 26354079 22118469 23622113 28004739

EMBL

BABH01030375 GDQN01008516 JAT82538.1 NWSH01001496 PCG71076.1 ODYU01004162 + More
SOQ43735.1 JN790614 AFD01656.1 PCG71071.1 NWSH01000030 PCG80543.1 PCG71072.1 KQ460954 KPJ10251.1 GDQN01002828 JAT88226.1 ODYU01001544 SOQ37909.1 PCG71077.1 ODYU01005376 SOQ46155.1 AGBW02014789 OWR41074.1 GAIX01014126 JAA78434.1 OWR41073.1 GAIX01003810 JAA88750.1 ODYU01008202 SOQ51601.1 GEZM01095826 JAV55318.1 LJIG01009440 KRT83076.1 KQ459603 KPI92798.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000007151 UP000053268

PRIDE

H9J8Q6

Pfam

PF04500 FLYWCH + More
PF00651 BTB

Interpro

IPR011333   SKP1/BTB/POZ_sf        + More
IPR000210   BTB/POZ_dom
IPR007588   Znf_FLYWCH

SUPFAM

SSF54695 SSF54695

ProteinModelPortal

H9J8Q6 A0A1E1W6C7 A0A2A4JH22 A0A2H1VSC0 J9QBN1 A0A2A4JGG4 + More
A0A2A4K9T4 A0A2A4JI35 A0A0N1IEB4 A0A1E1WN00 A0A2H1VAN7 A0A2A4JG78 A0A2H1VZ89 A0A212EHW9 S4NN21 A0A212EHU3 S4PLX9 A0A2H1WEX0 A0A1Y1K4D4 A0A0T6B6S9 A0A194PIC4

PDB

2NN2 E-value=3.96008e-05, Score=111

KEGG

101742489 no KO assigned | (RefSeq) protein abrupt-like

GO

GO:0005515 GO:0005673 GO:0004553 GO:0042600 GO:0006811 GO:0005509 GO:0016042 GO:0016020 GO:0003707 GO:0051537

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00608

Exp number, first 60 AAs:

0.00216

Total prob of N-in:

0.00747

outside

1 - 331

Pi

17.374338

Theta

21.111056

Tajima's D

-0.68105

CLR

0.585563

CSRT

0.201989900504975

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics