The Silkworm Genome Information Database

Gene

KWMTBOMO07500

Pre Gene Modal

BGIBMGA005877

Annotation

chorion_class_CB_protein_M5H4_precursor_[Danaus_plexippus]

Location

Bomo_Chr12(+):15171589-15172996 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.806

CDS

ATGACTTTTAAATTAAAGCTGTTAATACTTATCGTAACTCTATTGCGGATAAATTTAGCACAGTCTATTGGCAATGGTTTAAGCACCGGAGATGTGGCCATCAGCAATGGTGATACAACTGGTTTTTTGTTAAATTCAAATCAAATTGGTGGAAATGTACCTACGATTAATAACATGGACAACCAGGGACTCGGCAGCGGACTTCTATCATTTCAGAACAACGCTCCGGAACCATTGACCGATCCAAATAATATTAGCAATTTGAATAGATCTTCTAGAGGAACGCTTTTCGGTGGAATCGGCAACCAATTTCCATTTCAGTCCAGTTTCATGAACAGTCCGGCAAATCAAATTTCTAACAGTCTATCAGGCTTCAAAGGATTCCCTAACAGCTTTGGTACTGGTACGGCGGTATCAGGATTCTCGAATTGCTTAAGTAACGGCCTGACTAATAGAGCAGCTATTGATGGAAACGTCAGATCAGTGAGAGGTGCGGGCATCGATAATTTGATTAATCAAGCAGGATTAATCGGAAATCCATTTGCAGGAACTGCTGGAACTTTTGGAAATACTGTAACGAATCCAGCTTTTTTAACGAACCCATTACCGTCTACTCCCACTGGTAATTCGAATATTATACTTAACAATCCCGGGTTCTCGACGAATTCATTAGACTTGTCGAATCAGAATGCTTTTAATGGAATAGCGAATAGTGTAACAGCCGCGTCTTTAAACAACATGATAAACCCGGTAAACAGCTTAACGGTTGGTCCACTAACAAATTCCAACTCAGTAAGCAACGCTTTCGCTGGAACAAACTTACCTAATTATAGCAACCTTGACTTAGCTAATCATAAGAAGACGCTAGCTACTTTGACTGGCCTAAATCCGTCTAACCTGGGTACCGTTTCAAAATTAGCTGTAACTAGTAGCACAGCTCTATCGCCGACTGGACTGTCGATATTAGCTGAGAACTTAATGATGGATGGCAGTGTTTCGGTAACTGGAAAGATGCCGTTCGTTGGAACCGTGAATGTTGAGGGTACCATACCTGACAACGGCATTGGCACTGTCTTGTACGAGTGTGGCACCGGTAATGTTGGCATAATTAGCGATGACCGCGGTCTGATCGGGCAAAATAACTTTGGCGCGGGCAGACCATTCAACAATGGTGTCGGTGGCAATCTACTCGGCTTCAATAACAGAGGATTTGCGAGAAATAATTAA

Protein

MTFKLKLLILIVTLLRINLAQSIGNGLSTGDVAISNGDTTGFLLNSNQIGGNVPTINNMDNQGLGSGLLSFQNNAPEPLTDPNNISNLNRSSRGTLFGGIGNQFPFQSSFMNSPANQISNSLSGFKGFPNSFGTGTAVSGFSNCLSNGLTNRAAIDGNVRSVRGAGIDNLINQAGLIGNPFAGTAGTFGNTVTNPAFLTNPLPSTPTGNSNIILNNPGFSTNSLDLSNQNAFNGIANSVTAASLNNMINPVNSLTVGPLTNSNSVSNAFAGTNLPNYSNLDLANHKKTLATLTGLNPSNLGTVSKLAVTSSTALSPTGLSILAENLMMDGSVSVTGKMPFVGTVNVEGTIPDNGIGTVLYECGTGNVGIISDDRGLIGQNNFGAGRPFNNGVGGNLLGFNNRGFARNN

Similarity

Belongs to the chorion protein family.

Uniprot

H9J8N5

Pubmed

19121390

EMBL

BABH01030387

Proteomes

UP000005204

PRIDE

H9J8N5

Pfam

PF01723 Chorion_1

Interpro

IPR002635 Chorion

ProteinModelPortal

H9J8N5

KEGG

101742779 no KO assigned | (RefSeq) uncharacterized protein C1739.01-like

GO

GO:0007304 GO:0005213 GO:0007275 GO:0042600 GO:0006811 GO:0005509 GO:0016042 GO:0016020 GO:0003707 GO:0051537

SignalP

Position: 1 - 22, Likelihood: 0.981253

Length:

408

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.456570000000001

Exp number, first 60 AAs:

0.43278

Total prob of N-in:

0.02368

outside

1 - 408

Pi

28.116369

Theta

22.264441

Tajima's D

0.804158

CLR

0.329637

CSRT

0.607969601519924

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics