Silkworm Genome Informatics Database

Gene

KWMTBOMO07489 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005201

Annotation

ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]

Location

Bomo_Chr12(+):14277713-14290913 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.638 Nuclear Reliability : 1.3

CDS

ATGGATAACGTATATATTCTCAACAATATAGGGAAGGGAAGCGTGAAGGTGACGATCACACCGACCCAGCACAAGACCCTCAGTCACCTACCGAAGAGGCAGCCCGTGGATCTGGCATTTACGGACTTGACTTACAAAGTGCAAGAGGGAAGGAAGAGCAATGTCAAAACGATCCTCAAGTCTGTTTCGGGTCGGCTCCGTTCCGGCGAGCTCACGGCCATCATGGGTCCGTCGGGTGCCGGGAAGTCGACGCTTCTCAACATACTCACAGGATACAACGTGATCCAAGTTTTTTTCCGGATTCCTTCTGGTCTCTATGCATACGGCCCACCTGATGGTGAGTGGTTACCGTCGCCCATGGACTTCAGCAATGCCAGGGGCAGAGCCAAGCCGCTGCCTACCGCTTAA

Protein

MDNVYILNNIGKGSVKVTITPTQHKTLSHLPKRQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYNVIQVFFRIPSGLYAYGPPDGEWLPSPMDFSNARGRAKPLPTA

Uniprot

A0A1Q3G4X0 A0A182RA65 A0A2C9GQ51 Q16Y47 A0A182Q754 A0A023EXL2 + More
A0A1S4K4V5 A0A1Q3G4X3 A0A1Q3G4V9 A0A3B0JA86 Q29NQ1 B4N0M3

Pubmed

17510324 24945155 15632085 17994087

EMBL

GFDL01000201 JAV34844.1 APCN01001726 CH477525 EAT39536.1 AXCN02002064 + More
GAPW01000389 JAC13209.1 GFDL01000202 JAV34843.1 GFDL01000208 JAV34837.1 OUUW01000004 SPP79197.1 CH379059 EAL34167.2 CH963920 EDW77636.2

Proteomes

UP000075900 UP000075840 UP000008820 UP000075886 UP000268350 UP000001819 + More
UP000007798

Pfam

PF00005 ABC_tran + More
PF01061 ABC2_membrane

Interpro

IPR003439   ABC_transporter-like        + More
IPR017871   ABC_transporter_CS
IPR027417   P-loop_NTPase
IPR003593   AAA+_ATPase
IPR013525   ABC_2_trans

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

A0A1Q3G4X0 A0A182RA65 A0A2C9GQ51 Q16Y47 A0A182Q754 A0A023EXL2 + More
A0A1S4K4V5 A0A1Q3G4X3 A0A1Q3G4V9 A0A3B0JA86 Q29NQ1 B4N0M3

PDB

4G1U E-value=1.86605e-06, Score=117

KEGG

101738887 no KO assigned | (RefSeq) abcg; ATP-binding cassette sub-family G member 1-like

GO

GO:0005524 GO:0016021 GO:0016887 GO:0005216 GO:0006811 GO:0005509 GO:0016042 GO:0016020 GO:0003707 GO:0051537

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.99734

Exp number, first 60 AAs:

0.00113

Total prob of N-in:

0.27192

outside

1 - 135

Pi

24.195461

Theta

24.839631

Tajima's D

0.304748

CLR

0.69629

CSRT

0.459827008649568

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics