Gene

KWMTBOMO07483

Pre Gene Modal

BGIBMGA005206

Annotation

PREDICTED:_uncharacterized_protein_LOC101739642_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(-):14177254-14179482      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.798

CDS

ATGACGGATCGTACTATTGCGTCTCGTCCCAGCCTGGAGCAGGTAACAGCCATCGTAGACTTCATGGAGAAGCACCCTGCACTAGGGCTTGGACAGCTCCGTGGACTGGAAGGCAGAGACGAGAGCAAGAAACTGTGGTTAAAGTTAACTCGCATTGTCAATAATATTTCTGGGCCTACGAGGCCTATGAAGTCTTGGATCAAGTACTGGGCTGACAAAAAATCTACAGTAAGATCAAAAGTACAAGGATGTGGTGGGGATCCAAATAGCCTATGTTCTAACATTGAGAAGAAAATATGGGATGTTTTCTTAGCAAATGATAATTCAAGAACAAATCGAGGTGCTGTGAAACAAGAATCTCATTATACTGAAGATAACTTTTTTAACGAAGACAGCATGGATCAGAACCATGTTGAATCCGATCCGGTGCTGGCGTTCGAGGAACCCGTCGCCGATGCTGAGGAGAGGCAAATGGCGGTAATGGAGAAACTGTGA

Protein

MTDRTIASRPSLEQVTAIVDFMEKHPALGLGQLRGLEGRDESKKLWLKLTRIVNNISGPTRPMKSWIKYWADKKSTVRSKVQGCGGDPNSLCSNIEKKIWDVFLANDNSRTNRGAVKQESHYTEDNFFNEDSMDQNHVESDPVLAFEEPVADAEERQMAVMEKL

Uniprot

H9J6R4   A0A2A4JPK5   A0A1E1WGD2   A0A194REL5   A0A194Q0A9   A0A2H1V4I2   + More
A0A212FF96   A0A0L7LCD4   A0A0N1PHH3   A0A194PPX3   A0A1E1WC14   A0A2W1BUA2   A0A2A4K0H8   S4PGB3   A0A212ELJ9   A0A3S2NHC2   A0A2H1V019   A0A2A4JBL2   A0A2H1WGB2   A0A194QPF3   A0A0K8TMC8   A0A194Q9V8   A0A3S2PI95   E9IY02   H9JR50   E9I9E7   A0A3S2LD08  

Pubmed

19121390    26354079    22118469    26227816    28756777    23622113    + More
26369729    21282665   

EMBL

BABH01038120    NWSH01000898    PCG73638.1    GDQN01005036    JAT86018.1    KQ460325    + More
KPJ15730.1    KQ459592    KPI96850.1    ODYU01000431    SOQ35184.1    AGBW02008840    OWR52415.1    JTDY01001732    KOB73055.1    KQ460226    KPJ16426.1    KQ459597    KPI95018.1    GDQN01006541    JAT84513.1    KZ149960    PZC76360.1    NWSH01000285    PCG77771.1    GAIX01003727    JAA88833.1    AGBW02014037    OWR42364.1    RSAL01000038    RVE51077.1    ODYU01000061    SOQ34190.1    NWSH01002002    PCG69465.1    ODYU01008482    SOQ52119.1    KQ461185    KPJ07413.1    GDAI01002523    JAI15080.1    KQ459252    KPJ02204.1    RSAL01000025    RVE52158.1    GL766841    EFZ14551.1    BABH01039741    GL761795    EFZ22807.1    RSAL01000222    RVE44040.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000283053   

PRIDE

H9J6R4    H9JR50   

Pfam

PF13873   Myb_DNA-bind_5        + More
PF13855   LRR_8
PF00098   zf-CCHC

Interpro

IPR028002   Myb_DNA-bind_5        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR026753   NAIF1       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF57756   SSF57756       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9J6R4   A0A2A4JPK5   A0A1E1WGD2   A0A194REL5   A0A194Q0A9   A0A2H1V4I2   + More
A0A212FF96   A0A0L7LCD4   A0A0N1PHH3   A0A194PPX3   A0A1E1WC14   A0A2W1BUA2   A0A2A4K0H8   S4PGB3   A0A212ELJ9   A0A3S2NHC2   A0A2H1V019   A0A2A4JBL2   A0A2H1WGB2   A0A194QPF3   A0A0K8TMC8   A0A194Q9V8   A0A3S2PI95   E9IY02   H9JR50   E9I9E7   A0A3S2LD08  

KEGG

101739642    no KO assigned | (RefSeq) uncharacterized LOC101739642

GO

GO:0016021   GO:0006915   GO:0005634  

PANTHER

PTHR23098  

Length:

164

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.37554

outside

1  -  164

 

 

Pi

28.447074

Theta

28.186411

Tajima's D

-0.297792

CLR

0

CSRT

0.289185540722964

Interpretation

Uncertain