Silkworm Genome Informatics Database

Gene

KWMTBOMO07479

Pre Gene Modal

BGIBMGA005194

Annotation

PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_ankyrin_repeat_subunit_A_[Bombyx_mori]

Location

Bomo_Chr12(+):14077592-14078509 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.163

CDS

ATGTCGCAGGCCGCGGGCGGCAAAAAGGGCGGCAAAGGCCCGCCAAAGAAGAACACCGAAGAAGACAAGAACGCACCTGCGAAGCCTGCAGAAGAGAAAGACGAAACGGCCTCGAACAATGGAGAGAAGAAGGAAGTCAAGGAAGTCAATGGAGCGGAGGTGGTCAAGCCGCCCAGCGCCGGTGTCAACATTCGCGACGTGGCCGGGAAGATCTTGACCTTGGCCCAAAAAGGAGAATGGCCGGCCGTCGAGCAAACGCTCAAGGTCTTGGAGAAGCTGGTGGCTGCTGGGGGAGAAGATGCCATCAGTGTCCCTATGGCGGGGATACTTGATCCCGTAAGTGATTTAGTATTGTCTTGTGTTATCATTCGCCCGAAGAACATTCAGCATCAACCGCGTTTGAGGAAATTCGTAAATGTCAATAATGATAATTTTATATTATAG

Protein

MSQAAGGKKGGKGPPKKNTEEDKNAPAKPAEEKDETASNNGEKKEVKEVNGAEVVKPPSAGVNIRDVAGKILTLAQKGEWPAVEQTLKVLEKLVAAGGEDAISVPMAGILDPVSDLVLSCVIIRPKNIQHQPRLRKFVNVNNDNFIL

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9J6Q2 A0A2H1W8H1 A0A2A4JH53 A0A212F917 A0A212FC08 A0A194REK9 + More
T1H944 A0A1Y1MXZ4 A0A1Y1MUU8 A0A182JI68 A0A182QSQ1 Q7Q8L0 A0A1S4GZD0 A0A1S4GZB8 F4WY25 A0A384SNR0 A0A151IKH1 A0A195DFF2 A0A158NYK8

Pubmed

19121390 22118469 26354079 28004739 12364791 21719571 + More
21347285

EMBL

BABH01038126 ODYU01006979 SOQ49313.1 NWSH01001487 PCG71106.1 AGBW02009654 + More
OWR50220.1 AGBW02009240 OWR51279.1 KQ460325 KPJ15725.1 ACPB03015978 ACPB03015979 GEZM01020058 JAV89430.1 GEZM01020057 JAV89431.1 AXCN02000723 AAAB01008944 EAA10081.4 GL888434 EGI60950.1 KX249691 AOR81468.1 KQ977202 KYN04979.1 KQ980953 KYN11179.1 ADTU01004019 ADTU01004020

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000015103 UP000075880 + More
UP000075886 UP000007062 UP000007755 UP000078542 UP000078492 UP000005205

PRIDE

H9J6Q2

Pfam

PF12796   Ank_2        + More
PF13606   Ank_3
PF00023   Ank
PF00520   Ion_trans

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom
IPR002110   Ankyrin_rpt
IPR002153   TRPC_channel
IPR005821   Ion_trans_dom

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

H9J6Q2 A0A2H1W8H1 A0A2A4JH53 A0A212F917 A0A212FC08 A0A194REK9 + More
T1H944 A0A1Y1MXZ4 A0A1Y1MUU8 A0A182JI68 A0A182QSQ1 Q7Q8L0 A0A1S4GZD0 A0A1S4GZB8 F4WY25 A0A384SNR0 A0A151IKH1 A0A195DFF2 A0A158NYK8

PDB

5VKQ E-value=3.34055e-12, Score=167

KEGG

101741868 no KO assigned | (RefSeq) serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

GO

GO:0016021 GO:0005262 GO:0005216

Length:

147

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08782

Exp number, first 60 AAs:

0

Total prob of N-in:

0.19982

outside

1 - 147

Pi

19.437425

Theta

17.086489

Tajima's D

0.467616

CLR

0.185838

CSRT

0.511624418779061

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics