Silkworm Genome Informatics Database

Gene

KWMTBOMO07465

Pre Gene Modal

BGIBMGA005212

Annotation

PREDICTED:_uncharacterized_protein_LOC101742300_[Bombyx_mori]

Location

Bomo_Chr12(-):13847329-13854711 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.273 Nuclear Reliability : 1.921

CDS

ATGACAGATTCGATTCCAAATTCAAATTTGCCGGTACCCGTGCGGCGACGTGCGAGATCTACGCCGCCCCCCGTGGGACCGCCCCCTCCGCGCCGTCTCAGGCCGCTGCCGGACTCTGCCCCCTTGCCGGGTGTGATTCAACCAGGCAGAGAAATCTTTCTGAAGCCGTTGTCACCAATCACATTCGGCGAGAGGGAACCCAGTTCCGTTGTAGCTCTCCCTCGAAGCGAAGGAATTTTGAAATCGAAGTCGTCGTCGTCGATTGATTCTGGAAAAACAATTGCGGCAGAAATTGTCGAGGAAGTGACGCCGTCCCGATCTGCACCGCCGACACCATCTCGATCGCCGTCGATCCGTGTGGAAGATTATTCTGAAAACTCGAACGTTTCGCCGGTCAAATCGAAACACGACTCGAGGTCCGCGTCAGTAAAGAGTGTGACCGGATCACGGATCGAATCAAGAAACTCGATCGAAAGTCGAAGTTTAGAACCGAATGCAGTCAACAGACCCGATTCGCCGAACTCGGTTCACAGTGCAGAAGCGTCACCGACGTCGAATCGGAGCCGGACACCAGGACTGCCCAGCGAACCAGTCGAAGTATCGACATTGACCCGAGAACGGGACGTGCGAGGAGCCCTTGCCGAGTGCATCTTGCCGCCGCGCCATGAAGACTGGGAAGCGATTGTGACTGGACTCACGGAAATCGAGAGGCTAGCGGTTGACGAAGCTGCACGTGCGCCCGCCTCCACATGGCGCGCCGTGACCCGCGGAGCCACTGCTCACGTGAAGTCGCTGCGATCACGCGTGGCGCGCGCCGCGTGTCGCACGGTGGGCGCGTTGTTCGAACACCGCGGTCGTGTCCTAGAGCCTGAGCTGGAGGAGACGGCGGGCGCGTTACTGGAGCGATGCGCGGACGTCAACAGGTTCTTGCGAGCGGACGCAGCCGGCGCGCTGTGCAGCGTGGCGTGCGGTGGCAGCATGGCGCGTGCGGGCGTGGCGCTGGTGCGGCGCGGGGCGGGCCACCGCGCGGGTCCGGTGCGGGCGGCGGCGGCGGCGGCGTTGGTGCGGCTGGTGCGACGCGGGACGGCAGCTCGCATCTTGTCCTTGTCTCCGGAGCCGCGGACGATGTTGCTGCGGGCGGCGGGCGAGCTGTTAGCAGATGCCAGCGCCGAGGCGCGGCTACACGCACGCCAGCTGTGCCTTATCCTGTCTGAAGACGTACGTTTTCGACCGCTGCTGAAAGAGGCGATGCCACTTTCGCGATATCGAGCCGTCGAAAAATTAATAGATAAACTTCAAATACCGTAA

Protein

MTDSIPNSNLPVPVRRRARSTPPPVGPPPPRRLRPLPDSAPLPGVIQPGREIFLKPLSPITFGEREPSSVVALPRSEGILKSKSSSSIDSGKTIAAEIVEEVTPSRSAPPTPSRSPSIRVEDYSENSNVSPVKSKHDSRSASVKSVTGSRIESRNSIESRSLEPNAVNRPDSPNSVHSAEASPTSNRSRTPGLPSEPVEVSTLTRERDVRGALAECILPPRHEDWEAIVTGLTEIERLAVDEAARAPASTWRAVTRGATAHVKSLRSRVARAACRTVGALFEHRGRVLEPELEETAGALLERCADVNRFLRADAAGALCSVACGGSMARAGVALVRRGAGHRAGPVRAAAAAALVRLVRRGTAARILSLSPEPRTMLLRAAGELLADASAEARLHARQLCLILSEDVRFRPLLKEAMPLSRYRAVEKLIDKLQIP

Uniprot

H9J6S0 A0A2A4JEQ4 A0A3S2M795 A0A2H1VRT7

Pubmed

19121390

EMBL

BABH01038148 NWSH01001749 PCG70256.1 RSAL01000020 RVE52620.1 ODYU01004038 + More
SOQ43508.1

Proteomes

UP000005204 UP000218220 UP000283053

PRIDE

H9J6S0

Pfam

PF12348 CLASP_N + More
PF03798 TRAM_LAG1_CLN8

Interpro

IPR024395   CLASP_N_dom        + More
IPR034085   TOG
IPR016024   ARM-type_fold
IPR011989   ARM-like
IPR006634   TLC-dom

SUPFAM

SSF48371 SSF48371

Gene 3D

1.25.10.10

ProteinModelPortal

H9J6S0 A0A2A4JEQ4 A0A3S2M795 A0A2H1VRT7

KEGG

101742300 no KO assigned | (RefSeq) uncharacterized LOC101742300

GO

GO:0016021 GO:0005488 GO:0000166 GO:0004842 GO:0005680 GO:0006520 GO:0006508 GO:0008237 GO:0016020 GO:0003707 GO:0051537

Length:

435

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0816

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00391

outside

1 - 435

Pi

20.239059

Theta

21.314332

Tajima's D

-0.389017

CLR

0.614734

CSRT

0.273636318184091

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics