Gene

KWMTBOMO07463

Pre Gene Modal

BGIBMGA008503

Annotation

PREDICTED:_RNA-binding_protein_7_[Amyelois_transitella]

Location

Bomo_Chr12(+):13839722-13840561      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.634 Nuclear   Reliability : 1.915

CDS

ATGATTGACAAAAACAACAGAACCTTGTGGTGCGGTAATCTTCCAGAACAAATAACAGAAGAATTGCTTTACGAATTGTTCTTGCAGGCTGGTCCATTGGAGAAAGTGAGGATAGCTAAGGACCGCGATGGCCGTCAACGCAATTTCGCTTTTATAACCTTCTGTCACGAAGTATCGGTGCCATATGCGATATTACTCTTCCGCGGGACAACTTTGTTTAACAGAACTATTTCTCTACAATGCCGGAGTCGCATGGCAATATTACCGCCTCCTTTAAGATGTTACGGGCCAGAATTTCAAAATCACCCTCCTGAGACATATTTGGTTGAACCACCACCTAATATTGCACAGCAGTTTGCGCATATGACAAATAATTTGATGGAGGAAGAGGTCAATTTTGTACATAGTCCTAATAATTTCAATGACTTGTCAATAGCCAGTCTTCAAGGCAATTGGTCTCATAGACATCATCCTTACCCAACACAGGAATATTACTCTCGAGATAACTTTAGACCTAGGGAATCTGAACATTATAATAGGAGCAAGCACAGTAATAATTGGAGAGACAGGAAGTCTAAAAGAAATGGAAATCATAGGAGAGATTGA

Protein

MIDKNNRTLWCGNLPEQITEELLYELFLQAGPLEKVRIAKDRDGRQRNFAFITFCHEVSVPYAILLFRGTTLFNRTISLQCRSRMAILPPPLRCYGPEFQNHPPETYLVEPPPNIAQQFAHMTNNLMEEEVNFVHSPNNFNDLSIASLQGNWSHRHHPYPTQEYYSRDNFRPRESEHYNRSKHSNNWRDRKSKRNGNHRRD

Uniprot

H9JG56   A0A2A4JEY5   A0A3S2PIT5   A0A1E1WNI8   A0A2H1VRR1   A0A212FF12   + More
A0A0N0PCN7   A0A194PV03   S4PC38   A0A0L7KTR6   A0A232EWF5   A0A2P6KN26   A0A0P6J4K1   A0A0M8ZUP3   A0A084VWL3   A0A026W738   A0A2P2IAW5   A0A3P8TXK9   A0A3Q1AKH5   A0A3Q3SB14  

Pubmed

19121390    22118469    26354079    23622113    26227816    28648823    + More
26999592    24438588    24508170    30249741   

EMBL

BABH01002038    NWSH01004658    NWSH01001749    PCG64803.1    PCG70258.1    PCG70259.1    + More
RSAL01000020    RVE52622.1    GDQN01002499    JAT88555.1    ODYU01004038    SOQ43509.1    AGBW02008864    OWR52336.1    KQ460636    KPJ13390.1    KQ459592    KPI96818.1    GAIX01004331    JAA88229.1    JTDY01005774    KOB66643.1    NNAY01001864    OXU22690.1    MWRG01008345    PRD27723.1    GDUN01000902    JAN95017.1    KQ435879    KOX69889.1    ATLV01017659    KE525181    KFB42357.1    KK107364    QOIP01000007    EZA51922.1    RLU20502.1    IACF01005471    LAB71056.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000215335    UP000053105    UP000030765    UP000053097    UP000279307    UP000265080    UP000257160    UP000261640   

PRIDE

H9JG56   

Pfam

PF00076   RRM_1

Interpro

IPR000504   RRM_dom        + More
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR035979   RBD_domain_sf       

SUPFAM

SSF54928   SSF54928       

Gene 3D

3.30.70.330    

ProteinModelPortal

H9JG56   A0A2A4JEY5   A0A3S2PIT5   A0A1E1WNI8   A0A2H1VRR1   A0A212FF12   + More
A0A0N0PCN7   A0A194PV03   S4PC38   A0A0L7KTR6   A0A232EWF5   A0A2P6KN26   A0A0P6J4K1   A0A0M8ZUP3   A0A084VWL3   A0A026W738   A0A2P2IAW5   A0A3P8TXK9   A0A3Q1AKH5   A0A3Q3SB14  

PDB

5IQQ     E-value=1.06347e-20,     Score=243

KEGG

101738485    K13188 RNA-binding protein 7 | (RefSeq) RNA-binding protein 7

GO

GO:0003723   GO:0003676   GO:0000166   GO:0004842   GO:0005680   GO:0006520   GO:0006508   GO:0008237   GO:0016020   GO:0003707   GO:0051537  

Length:

201

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.01636

Exp number, first 60 AAs:

8.23987

Total prob of N-in:

0.76612

outside

1  -  201

 

 

Pi

27.510866

Theta

26.226267

Tajima's D

0.210011

CLR

2.387947

CSRT

0.433828308584571

Interpretation

Uncertain