SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07454
Pre Gene Modal
BGIBMGA005185
Annotation
PREDICTED:_uncharacterized_protein_LOC101741159_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.249
 

Sequence

CDS
ATGTCGCAAAAACAAGTTAGAAAACGTGGAGCAAATTACACTCAAGAGGAAAAAACATTGCTGCTGGATCTCATCATGCAATATAAAGATATTGTGGAAAGTAAACGAACAGGTGGCATTATTATCCAAAAGAAAAAGGAGGTTTGGATAACTATAACCTCAAAATATAATAGCAGCTGCAGTAGTGGTCCCAGGGATGTTGACCAGCTGAAAGCTTTATATGACAATATGAAGCAAAAATCTCGCAAAGAAATTAGTGAAAAAAATAAAGAAGCATATATTCAGGCAATGGAAATGGAAGTTGTGACTGAGGCAGACGTTACACGAGCTTTAATAAACATTAAAGAAGACAAGATCGAAATGAAAAAGACTGGTGGTGGCTTCTGGAAACCAAAATCTACGGAAACAGATGCAAAAGTTCTTTCAATAATAAAAGAACAGACGGAACCACTTCACAATCCATATGATAGTGCAGCAGATTTTTTTAATGATGTAGTTGAAATAACTTGTACTGACGAAGGCAACAAGTTAATTGACAACGATTTAATAAATTCATCTCCGTACACACCTTGTGTAGCACTAAAAGAAATAAGTATGACTACAGGTCTCGAAGAAGTAACCCCCAAAAGAGTAGCATCGGAAAGTGAGGGAAAAGTTGTAAAGAAAAGAGAATTTTCAATGGGATCTGGCAGTATAAAGAAAATAAATGAACCAGCACATATCAAAATGCTACAAAAAAAGAAAGTGACTCCAAGAAAATTAATAAAAAAATCATCTGCAGAGCAGTTAAAGAACACATATTTCAAAAAAAAAAGTCAGAATGCTGATTTGGAAAGAAAAAAGCTGATGATTGAGATATTATACATCAAAAAAGAGCATGAACTTCGGATGCAGATTCTAAAAGCAAAACAGTGGAGACTAGAAAAACATTAG
Protein
MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGPRDVDQLKALYDNMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTETDAKVLSIIKEQTEPLHNPYDSAADFFNDVVEITCTDEGNKLIDNDLINSSPYTPCVALKEISMTTGLEEVTPKRVASESEGKVVKKREFSMGSGSIKKINEPAHIKMLQKKKVTPRKLIKKSSAEQLKNTYFKKKSQNADLERKKLMIEILYIKKEHELRMQILKAKQWRLEKH

Summary

Pfam
PF13873   Myb_DNA-bind_5
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1       

Ontologies

GO

Topology

Length:
310
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.20218
outside
1  -  310
 
 

Population Genetic Test Statistics

Pi
1.604236
Theta
4.423293
Tajima's D
-1.727738
CLR
14.127082
CSRT
0.0291485425728714
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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