Silkworm Genome Informatics Database

Gene

KWMTBOMO07439

Pre Gene Modal

BGIBMGA005232

Annotation

PREDICTED:_uncharacterized_protein_LOC101737441_[Bombyx_mori]

Location

Bomo_Chr12(-):13411639-13418592 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.622

CDS

ATGTCTAACACATCTAGTAATAAAAATCATGTGAAAAAATCCACAAGTAGCCGTGATCGTGATAAAAACAAATCTGTGCCTTCAGAATCTGGATCTAGTCAGTGCGATACACCTCCTCTTAATGACAAGGATGGACCGTCATCACAAGGCCGATTTGCTGGGGTGGGTCTTGAATCTGTGTTTTGCATGGCAGAACAAGTTGCATGTGAGCTCAACGTTGAGGCCGCTACGAATCTTGCTGAGGATGTCAGCTACAAATTACGACAGACCATAAGTACCATAGCCCTACATAGTGAGATGATGAAAAAGTCACGTGTCGATGCATGGGATGTCAATACTGTGTTTATGTTAACCGACACTAGTCCTGTGGCAGGAGCATGTGGATCTCAGTATGCTTCCTTTGGAGATGACAACAAATATTGCTGTCAAATTGAACATCTTCTAAATGTAACGGAATTCGCCCTATCCACGCAGACCTACGTGTATTGCTCGCCTCCCACGATATCCGTCGAATGGATAATGGACGACAAAAGTTTAAGCAGTAGTAGTAATATAAGTGTCCAACTTCATAATTACTACACTAAAGTAGCCAGAGCCATATTGAACCTAAGGAAGAAACCAAAGGAAGTAGCCGTCGAAGATCTGCTGACGAACACAAGGATAGGTCCGATATTCCCGAACCTCTTCAATCTGGCCGTACTGGTGCTGAACGACGACAACCTGAATGCTCTCAACGTTCCCGCCAAGAAACCACTGCAGTCCAACGTTTTGGACATGGTGGACGCGCTCTGCTCTAACCCCTGCAGTCTGGATACAAATATACAACAGCAATTCCAAAGGCTGTTTCCTGTGATGGTCTCAAATATACTGGGTAATGGAACGTTAGCCGAGAAGATGGTTGCGATATTAACGAAAATCACACGTACATGGCCTTCTTTTGTTAAAATAGGACAGGGCATCCTGTACGATTATTTGTCGCAAGGCACCCGTGACCGTCTGACGGCGCCCATGATCAAGTGCGTGACGGCGCTCGGCCGGACGGCGCTGGCCCAGTGCTTGGAGGATTACCTGGACTACTTGGACGAGTGCATGCAGGGCCCGCGACCCCCGCCACACCACGGAATGTATATGCTCAGGGAGGCTATACTGGATGCTTCTACGTGTCTCCTCAGATCTGAACCCACGACGTATTTGGAAGACTACGTCACCACCGACTACACCATGTACGAGATGCTGGGGGAGTCTATACTGCCCAGGCGGCTTGTGTTCCCCGTCTCAGCAGCAGTCAAAAACGATAACTCTCCTGCCGAGAAGACCGAAGAGGATTCGGTGTGCATTCCCCGACGTCCCGTGCCGAGGAGACCGAAGTTCAGATTGATACCTTCGACGAGGACCAACCGGAGTGTCCACAGGGACGCCGTGTTCGAACCCACCAAGTTCCGGTGCGACGCGCGCATCAGCATTAACGTGCGAGCGTGCCGCGCGCCCGCCGGGCCGGGGGGCGGGGGGGCGCGTGCGGGGGCCGGGGTGGCGCGTGTGGGGGGTGGGGGGTCGGGAGGCGCGGTGGCGGCCGCCGGGCGCCTGCACCGCTTCCGATACAGACTGAACAAGAATCGTGAACCGTTACCGCTGTTAAGTTCGCTGATGCTGTGA

Protein

MSNTSSNKNHVKKSTSSRDRDKNKSVPSESGSSQCDTPPLNDKDGPSSQGRFAGVGLESVFCMAEQVACELNVEAATNLAEDVSYKLRQTISTIALHSEMMKKSRVDAWDVNTVFMLTDTSPVAGACGSQYASFGDDNKYCCQIEHLLNVTEFALSTQTYVYCSPPTISVEWIMDDKSLSSSSNISVQLHNYYTKVARAILNLRKKPKEVAVEDLLTNTRIGPIFPNLFNLAVLVLNDDNLNALNVPAKKPLQSNVLDMVDALCSNPCSLDTNIQQQFQRLFPVMVSNILGNGTLAEKMVAILTKITRTWPSFVKIGQGILYDYLSQGTRDRLTAPMIKCVTALGRTALAQCLEDYLDYLDECMQGPRPPPHHGMYMLREAILDASTCLLRSEPTTYLEDYVTTDYTMYEMLGESILPRRLVFPVSAAVKNDNSPAEKTEEDSVCIPRRPVPRRPKFRLIPSTRTNRSVHRDAVFEPTKFRCDARISINVRACRAPAGPGGGGARAGAGVARVGGGGSGGAVAAAGRLHRFRYRLNKNREPLPLLSSLML

Uniprot

H9J6U0 A0A2H1VKE2 A0A2A4JX50 A0A3S2M7A4 A0A194PTU5 A0A212EXG1 + More
S4PAG9 A0A0L7KYD4 A0A1Y1KFX3

Pubmed

19121390 26354079 22118469 23622113 26227816 28004739 + More

EMBL

BABH01037246 BABH01037247 BABH01037248 ODYU01003032 SOQ41298.1 NWSH01000443 + More
PCG76389.1 RSAL01000020 RVE52636.1 KQ459592 KPI96836.1 AGBW02011790 OWR46124.1 GAIX01003269 JAA89291.1 JTDY01004372 KOB68232.1 GEZM01087735 JAV58515.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000007151 UP000037510 + More

PRIDE

H9J6U0

Pfam

PF02969 TAF

Interpro

IPR009072   Histone-fold        + More
IPR037796   TAF6
IPR004823   TAF_TATA-bd

Gene 3D

1.10.20.10

ProteinModelPortal

H9J6U0 A0A2H1VKE2 A0A2A4JX50 A0A3S2M7A4 A0A194PTU5 A0A212EXG1 + More
S4PAG9 A0A0L7KYD4 A0A1Y1KFX3

KEGG

101737441 no KO assigned | (RefSeq) uncharacterized LOC101737441

GO

GO:0006357 GO:0006367 GO:0005669 GO:0000124 GO:0046695 GO:0046982 GO:0006352 GO:0006412 GO:0005737 GO:0006520 GO:0006508 GO:0008237 GO:0016020 GO:0003707 GO:0051537

PANTHER

PTHR10221

Length:

550

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.61218

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00760

outside

1 - 550

Pi

23.626613

Theta

25.425523

Tajima's D

-0.633116

CLR

0.949528

CSRT

0.209939503024849

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics