Gene

KWMTBOMO07437

Pre Gene Modal

BGIBMGA005220

Annotation

PREDICTED:_neuroendocrine_protein_7B2_[Amyelois_transitella]

Location

Bomo_Chr12(+):13282552-13305868      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.365

CDS

ATGGGCCGGTACGCCATGCTACTTTTGGCGATAAACACCGTCGCAGCCATGGGCTTTATCCCCCATGGTTCTATTGGGGCAAAGGATCATTTAATAACGGAAACTTTGCTTCGTGAAGTAGTCGAGCGTATGGGCAAAGACTTCAACGACGCGGCGTCCAGCTACCTAGAGTTCCCGGCCAGCGACCGCCATCTCGCCCTGATGGCGCACGCGAGCAAGGACCTGGAGAACGAGCAGCTAGACTACGACTCGTTGATCGACGGGAACCCCAGCCCCAGCCTGCGCGACCAAGAGTACTTGCAGCACAGTTCGTTGTGGGGCCATCAGTACGTAACAGGCGGTGCTGGCGAGGGTGAGCAGCGTCTCCGACCATCGGGCGTGGTCCCTAACCGACAAATGGTGAAAACTGACGCTGTTCTGCCCGCGTATTGTAACCCGCCCAATCCATGCCCCGTCGGATACACAGAAGACCAGGGATGCATTAGCGAGTTCGAGAACACGGCCGCCTTCAGCCGCGAGTACCAGCTGTCTCAGCGCTGCATGTGCGATGGAGAGCATATGTTCAGCTGCCCATCCGACTCAACTTCAGATATTGACTTGCGTTTCCCCGAGCATCACAAGAACCTCGTCGCCAAGAAGTACAAGCCTGACATGGAAAACCCTTACTTAATGGGCGAACGCTTGCCGATTGCAGCCAAAAAGGGTTTCGATGTTAGCATGTACTAG

Protein

MGRYAMLLLAINTVAAMGFIPHGSIGAKDHLITETLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASKDLENEQLDYDSLIDGNPSPSLRDQEYLQHSSLWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLPAYCNPPNPCPVGYTEDQGCISEFENTAAFSREYQLSQRCMCDGEHMFSCPSDSTSDIDLRFPEHHKNLVAKKYKPDMENPYLMGERLPIAAKKGFDVSMY

Uniprot

A0A2H1V8G0   A0A2A4JMV7   H9J6S8   A0A212EZX6   A0A194PV22   A0A3S2PIU3   + More
A0A0N0PCN1   A0A0L7LLP6   A0A1L8DU20   B0W4N0   A0A023EL04   A0A1Q3FRD2   A0A1L8DU82   A0A1Q3FRC1   Q17JE9   A0A182Y048   W5J7K9   A0A182WU67   A0A182HUS9   A0A182U0X0   A0A182L1L6   Q7Q3X2   A0A182JWU7   A0A182URA2   A0A067R7V8   A0A182NUA1   A0A1Y9HEV7   A0A182PMM2   A0A182W770   A0A182LW94   A0A2J7PTY7   A0A182QCK8   A0A182F6C0   A0A182JJW4   U5EY64   E0W3V5   A0A336M3R4   A0A1B0DHZ3   A0A1B6CRY9   A0A0T6AYD8   A0A1J1ILV3   A0A1Y1MFM3   A0A1B6FPX8   D2A238   A0A1B6MU06   A0A084VN81   A0A1B6HAF8   A0A1W4X1A5   A0A1W4XC50   A0A1S3DNA4   A0A2S2QRS7   A0A2M4AZR7   A0A1B6KWD3   A0A2S2R3U6   V5GA95   A0A2H8TWW8   A0A2S2PQU3   J9K8N2   A0A088AT08   J3JX96   A0A0L0CG15   U4UDE4   A0A2A3EIB5   V9IL06   A0A0A9W763   B6VE08   A0A023GAF2   A0A023FRE4   A0A0A1XEV6   V5HBQ4   V5HLM4   A0A3L8E2I6   A0A3S3P858   A0A0K8W2F7   A0A1A9VG45   A0A1B0G4M9   W8CCE2   A0A1B0A1M9   A0A1A9Y8E0   A0A1B0BMR6   A0A034WCR1   A0A1I8Q455   U4UPP1   A0A1A9WTY6   T1PBQ2   A0A1I8M7C5   A0A226ETJ6   A0A310SES1   A0A224XW83   A0A0L7QUR4   K7J3M4   E9IA67   A0A151WRX1   F4X441   E9FS71   A0A232EZH9   A0A132AEA3   A0A154NXK0   N6UMS9  

Pubmed

19121390    22118469    26354079    26227816    24945155    17510324    + More
25244985    20920257    23761445    20966253    12364791    14747013    17210077    24845553    20566863    28004739    18362917    19820115    24438588    22516182    26108605    23537049    25401762    26823975    25830018    25765539    30249741    24495485    25348373    25315136    20075255    21282665    21719571    21292972    28648823    26555130   

EMBL

ODYU01001219    SOQ37133.1    NWSH01001008    PCG73149.1    BABH01037252    AGBW02011208    + More
OWR47040.1    KQ459592    KPI96838.1    RSAL01000020    RVE52638.1    KQ460636    KPJ13370.1    JTDY01000674    KOB76269.1    GFDF01004177    JAV09907.1    DS231838    EDS33875.1    GAPW01003731    JAC09867.1    GFDL01004911    JAV30134.1    GFDF01004269    JAV09815.1    GFDL01004960    JAV30085.1    CH477233    EAT46754.1    ADMH02002020    ETN59951.1    APCN01002476    AAAB01008964    EAA12615.3    KK852649    KDR19503.1    AXCM01004639    NEVH01021216    PNF19802.1    AXCN02000770    GANO01000565    JAB59306.1    DS235883    EEB20311.1    UFQT01000134    SSX20638.1    AJVK01006097    GEDC01021104    JAS16194.1    LJIG01022511    KRT80195.1    CVRI01000055    CRL01223.1    GEZM01037177    JAV82107.1    GECZ01017512    JAS52257.1    KQ971338    EFA02732.2    GEBQ01000598    JAT39379.1    ATLV01014722    ATLV01014723    KE524984    KFB39425.1    GECU01036127    JAS71579.1    GGMS01011242    MBY80445.1    GGFK01012972    MBW46293.1    GEBQ01024443    JAT15534.1    GGMS01015465    MBY84668.1    GALX01001421    JAB67045.1    GFXV01006126    GFXV01006462    GFXV01006942    MBW17931.1    MBW18267.1    MBW18747.1    GGMR01001537    GGMR01019221    MBY14156.1    MBY31840.1    ABLF02015012    ABLF02015013    ABLF02015014    BT127865    AEE62827.1    JRES01000531    KNC30414.1    KB632308    ERL91989.1    KZ288254    PBC30741.1    JR050001    AEY61151.1    GBHO01040348    GBRD01015437    GDHC01015905    GDHC01007910    JAG03256.1    JAG50389.1    JAQ02724.1    JAQ10719.1    FJ377312    ACJ12615.1    GBBM01004197    JAC31221.1    GBBK01000116    JAC24366.1    GBXI01005269    JAD09023.1    GANP01012096    JAB72372.1    GANP01005879    JAB78589.1    QOIP01000001    RLU26951.1    NCKU01001958    NCKU01001957    NCKU01000134    RWS10801.1    RWS10804.1    RWS17016.1    GDHF01006951    JAI45363.1    CCAG010017166    GAMC01003851    JAC02705.1    JXJN01017039    GAKP01007032    JAC51920.1    ERL91990.1    KA646104    AFP60733.1    LNIX01000002    OXA60849.1    KQ769844    OAD52785.1    GFTR01003686    JAW12740.1    KQ414731    KOC62397.1    GL761987    EFZ22517.1    KQ982796    KYQ50600.1    GL888625    EGI58765.1    GL732523    EFX89982.1    NNAY01001475    OXU23834.1    JXLN01013360    KPM09314.1    KQ434771    KZC03824.1    APGK01007644    KB737379    ENN83035.1   

Proteomes

UP000218220    UP000005204    UP000007151    UP000053268    UP000283053    UP000053240    + More
UP000037510    UP000002320    UP000008820    UP000076408    UP000000673    UP000076407    UP000075840    UP000075902    UP000075882    UP000007062    UP000075881    UP000075903    UP000027135    UP000075884    UP000075900    UP000075885    UP000075920    UP000075883    UP000235965    UP000075886    UP000069272    UP000075880    UP000009046    UP000092462    UP000183832    UP000007266    UP000030765    UP000192223    UP000079169    UP000007819    UP000005203    UP000037069    UP000030742    UP000242457    UP000279307    UP000285301    UP000078200    UP000092444    UP000092445    UP000092443    UP000092460    UP000095300    UP000091820    UP000095301    UP000198287    UP000053825    UP000002358    UP000075809    UP000007755    UP000000305    UP000215335    UP000076502    UP000019118   

PRIDE

H9J6S8   

Pfam

PF05281   Secretogranin_V        + More
PF04408   HA2

Interpro

IPR007945   Secretogranin_V        + More
IPR027417   P-loop_NTPase       
IPR007502   Helicase-assoc_dom       
IPR031083   YTHDC2-related       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2H1V8G0   A0A2A4JMV7   H9J6S8   A0A212EZX6   A0A194PV22   A0A3S2PIU3   + More
A0A0N0PCN1   A0A0L7LLP6   A0A1L8DU20   B0W4N0   A0A023EL04   A0A1Q3FRD2   A0A1L8DU82   A0A1Q3FRC1   Q17JE9   A0A182Y048   W5J7K9   A0A182WU67   A0A182HUS9   A0A182U0X0   A0A182L1L6   Q7Q3X2   A0A182JWU7   A0A182URA2   A0A067R7V8   A0A182NUA1   A0A1Y9HEV7   A0A182PMM2   A0A182W770   A0A182LW94   A0A2J7PTY7   A0A182QCK8   A0A182F6C0   A0A182JJW4   U5EY64   E0W3V5   A0A336M3R4   A0A1B0DHZ3   A0A1B6CRY9   A0A0T6AYD8   A0A1J1ILV3   A0A1Y1MFM3   A0A1B6FPX8   D2A238   A0A1B6MU06   A0A084VN81   A0A1B6HAF8   A0A1W4X1A5   A0A1W4XC50   A0A1S3DNA4   A0A2S2QRS7   A0A2M4AZR7   A0A1B6KWD3   A0A2S2R3U6   V5GA95   A0A2H8TWW8   A0A2S2PQU3   J9K8N2   A0A088AT08   J3JX96   A0A0L0CG15   U4UDE4   A0A2A3EIB5   V9IL06   A0A0A9W763   B6VE08   A0A023GAF2   A0A023FRE4   A0A0A1XEV6   V5HBQ4   V5HLM4   A0A3L8E2I6   A0A3S3P858   A0A0K8W2F7   A0A1A9VG45   A0A1B0G4M9   W8CCE2   A0A1B0A1M9   A0A1A9Y8E0   A0A1B0BMR6   A0A034WCR1   A0A1I8Q455   U4UPP1   A0A1A9WTY6   T1PBQ2   A0A1I8M7C5   A0A226ETJ6   A0A310SES1   A0A224XW83   A0A0L7QUR4   K7J3M4   E9IA67   A0A151WRX1   F4X441   E9FS71   A0A232EZH9   A0A132AEA3   A0A154NXK0   N6UMS9  

KEGG

101736661    no KO assigned | (RefSeq) neuroendocrine protein 7B2

GO

GO:0007218   GO:0030141   GO:0016021   GO:0004386   GO:0005524   GO:0006412   GO:0005737   GO:0006520   GO:0006508   GO:0008237   GO:0016020   GO:0003707   GO:0051537  

PANTHER

PTHR12738   PTHR18934:SF100  

SignalP

Position:   1 - 18,         Likelihood:  0.794831

 

 

Length:

241

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.7228

Exp number, first 60 AAs:

10.7228

Total prob of N-in:

0.44330

POSSIBLE N-term signal

sequence

outside

1  -  241

 

 

Pi

26.368456

Theta

23.486225

Tajima's D

-1.118889

CLR

0.64693

CSRT

0.11734413279336

Interpretation

Uncertain