Gene

KWMTBOMO07431

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr12(+):13035992-13040166      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.079 Nuclear   Reliability : 1.119

CDS

ATGGCCCGGGCGCGCGTTAGCGTCGACGTGGATGCCTTGGGCGTGGAGGGTGGCCTCCGAGTCCGGCACACCGCCAATGGGGCCCGGTTGCTGGAGTGTCCTGGTGCCAACACCAGCGCGGTCGCGGACAGGGTAGCAGCCCGGCTCCGCGAAATCCTGCCGGACCCAGAAGTGGTGCGTATAGACAGGCCCGTCAAGATGGCGGAAGTCAAAGTGACGGGCCTGGATGAATGCGCCACTAAGGAGGAAGTGGCCGCCGCCATTGCATCGCAGGGCAATTGCGCCCTTACGCAGGTGAAGGTAGGAGAGCTGCGAAGCTCTTACTCTGGAGCCTTCACTGTGTGGGCGCGTTGCCCTATGCAGGCAGCCACACTCCTGGCTACGCCTCCACAAGGTCGGCCCGCCGACTCACCAGGGAGGCTACGCGTAGGCTGGGTGATAGCCCACGTGCAGCTACAGAAGGCCCGCCCCTGGCGATGCCTCCGGTGTTTCGGCACCGGGCACGGCCTCGCCAGGTGCCCGTCGGCTGTGGACCGCAGCGGTCTTTGTTTCCGCTGCGGCCAGCCCGGTCACAAAGCGGGCTCCTGCACAGCCGCCGCACCGCACTGCGTGCTATGCGACGCGGCGAAGCGGCGGGCCGATCATCGGGCCGGGGGCCCGTCCTGTCTTTCCGCACCCTCCTCCACAAAGAGGAGGCGTGGCGGAAAAAAGAAGAAAAATATAAAGGAAGGGCCGGCTGCCTGTGATACAGCCGGCCGGGCGCAGGATCTCCTCGTCCACACCATGGCGGAGTGGTTCATCGACATCGCGATCGTTGCGGAGCCATACTTCGTACCTCCCGACCGGGAGGATTCCTGGGCCGGAGATGTTGATGGCTCCGTGGCGATCGTGATGCGACAGTCTGCGGCGTTACCCCCCCTTGGAATGGTGGCCAGGGGATCCGGGTACGTCGTCGTTAGGGTCAACGAAACCGTCGTGATCGGGGTGTACTTCTCTCCGAACAGGAGTCTCGCTGAGTTCGAGCGGTTCCTGGGCGGGCTCGAGGCGTTGGTTCATCGCTTCGAGTCTCGCCCGGTGATACTGGCGGGGGACTTCAACGCTAAATGTACGGCGTGGGGTTCTCCCCGCACGGACTCGCGCGGCGAGTTCCTGTCGGAGTGGGCTTTCGCGACCGGCTTCTGTCTTCTGAACAGAGGTTCGGTCGCGACCTGCGTGCGGTGGAACGGGGAATCACACGTGGACGTGTCGTTCGCGTCTCCGTCCGCCGCACGCCGTGTCCATGGCTGGCGTGTTCTCGAGGGGGCGGAGACGCTCTCGGACCATCGGTTCGTCCGATTTGAGCTCTCCGTTTCCACCTTGTTGAACGCGCCGGACGAAGACGCCCGTGGTGAGGAGGAGCTCCCGCGTAGTGCTCCCCGATCATTCCCGCGATGGGCACTGAAGCGCCTGAACAAGGTGCTTGCGGTGGAGGCGGCCACAGTGGCCGCGTGGGCGCCGATGCCCGCGCGTCTAGTGGACGTGGAGTTGGAGGCTGAATGGTTCCGGGGTACGATGCGTCGCGTCTGCGATGCTGCGATGCCCCTGGTCAGCGGTCGCGCTCCGCGTGGCGGTGCGTATTGGTGGACGCCCGAGATCGCGCTCCTCCGAGAGGAGTGCGTGCGGGCGCGCCGCCGAAGCGCCCGCCACCGCCGTCGCCGCCTTCGCGATGCGGATTTCGCGGAGGTGGCGACCCGCCTGCATGCCGACTGCCGTCAGAAGCAGGAGGCACTGCGGCGGGCCATCGGCGAGGCCAAGTCTCAGAGCATGAAGACGCTCCTGGAGACGCTTGACCAAGATCCTTGGGGGCGCCCGTACCAAACGGTCCGCAAGAAATTGCGGCCGTGGGCGCTCCCGGTGACGGAACGTCTCCAGCCTCAGCAGCTGCGGGAGATTGTCTCCGGGCTGTTCCCGCGGATGGAGAGGGGCTTTGAGCCCCCTTCCATGGGCGCGCCACCACGCAGTAGCGTGAGCGGTGATTCCCCTGCTGAGGTGGTCCCTCTGAGCATCTCGGAGGAGGAGATTCGTGCGGCCGTGTCGAGGATGCGGAGGAAGGACGCGGCCCCCGGCCCTGACGGTGTTCACGGCCGGGTCTGGGATTTGGCCTTCGGTGCCCTTGGGGACCGACTCGTGCGGCTCTATGAAGCCTGCCTCGAGTCGGGACGGTTTCCGAAGCAGTGGAAGACGGGCAGACTTGTTCTGCTAAGGAAGGAGGGACGCCCCGCGGACTCACCTGCGGGATATCGTCCCATCGTGCTGCTGGACGAGGCGGGAAAATTGCTCGAGCGGGTGGTGGCCGCCCGCATCGTCCAGCATCTGGCAGGGGTGGGTCCCGATCTGTCAGCGGAGCAGTTCGGATTCAGGGAGGGCCGCTCGACCATCGACGCGGTGATGCGTGTGCGTGCCCTCTCTGATGAGGCTGTCGGCCAGGGTGGGGTTGCACTGGCGGTGTCCCTTGACATCGCCAACGCGTTCAACACCTTGCCCTGGTCGGTGATCGCAGGGGCGCTGGAGTATCACGGCGTCCCTGCGTATCTCCGTCGGCTGATCGGGTCCTACCTCGAGGACAGGTCGGTCGTGTGCACCGGGCACGGTGGGGCGGTGCTCCGCTTCCCCGTCCAGCGCGGTGTTCCACAGGGGTCGGTCCTTGGCCCTATCTTGTGGAACATCGGCTACGACTGGGTCCTGCGTAGCGCCCTAAGTGCTCCTCTCCCGGGTCTGAGCGTAGTTTGTTACGCGGACGACACTTTGGTCGTGGCCCGGGGGAGGGACTTGCGAGAGTCTGCCCGTCTTTCCTGCGCGGGGGTGGCCTTCGTCATCGGCAGGATTCGAAGGCTGGGTCTGGAGGTGGCGCTCGATAAATCCCAGGCCCTGTTGTTTCACGGGGCCCGGAGAGCGCCACCTCAGGGGGCTCACCTTGTGATCGGAGGCGTTCGCGTCGAAATTGAGGCGACCGGATTACGGTACCTCGGTCTCGTACTGGACGGTCGTTGGAGCTTCCGCACTCACTTTGAGAGATTAGGTCCCCGATTGATGGCGGCCGCCGGCTCGCTGAGTCGGCTGTTGCCGAACGTCGGGGGGCCTGACGTGGTGGTGCGCCGCCTCTACACGAGGGTGGTGCGGTCGATGGCACTGTACGGGGCTCCCGTGTGGTGCCACGCCCTGACCCGCGACAACGTTGCGGCGTTGCGACGTCCGCAGCGCGCGATTGCGGTCAGGGCGGTTCGTGGATACCGCACCATCTCGTTCGAGGCGGCGTGCGTGCTAGCTGGGACGCCTCCCTGGGACCTGGAAGCGGGGGCGCTCGCTGCGGATTACGCGTGGCGATGCGATCTCCGCTCCAGGGGGGAGCCGCGTCCTGGCGCGGTGGAAGTTCGAGCGCGGAAGCTTCAATCTCGGCGTGCCGTGCTCGAGGCGTGGTCTCGCCGCCTGGCGGACCCCGCCTACGGGCGACGGACCGTCGAGGCGATCCGCCCGGTCCTCTCGGACTGGGTGAATCGCGACCGAGGACGTCTCACCTTCCGAGCGACGCAGGTGCTCACGGGACACGGCTGTTTCGGTCGCTACCTGCACCTCGTCGCCCGGAGGGAGCCGACGCCGAAGTGCCACCACTGCAGTGGCTGCAACGAGGACACGGCGGAGCACACGCTCGCGTACTGCCCCGCTTTCGCGGAGCAGCGCCGCGTCCTCGTTGCAAAAATAGGACCGGACTTGTCGCTTCCGACCGTCGTGGCTACGATGCTCGGCAGCGACGAGTCCTGGCAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCAGAAGGAGGCGGCGGAACGGGAGAGGGAGAGCTCTTCTTCCCTCTCGGCGCCGTGCCGCCGCCGTCGGGCCGGGGGTCGGAGGAGGGCGTTTGTCCAGCTCCAGCCCCTATGA

Protein

MARARVSVDVDALGVEGGLRVRHTANGARLLECPGANTSAVADRVAARLREILPDPEVVRIDRPVKMAEVKVTGLDECATKEEVAAAIASQGNCALTQVKVGELRSSYSGAFTVWARCPMQAATLLATPPQGRPADSPGRLRVGWVIAHVQLQKARPWRCLRCFGTGHGLARCPSAVDRSGLCFRCGQPGHKAGSCTAAAPHCVLCDAAKRRADHRAGGPSCLSAPSSTKRRRGGKKKKNIKEGPAACDTAGRAQDLLVHTMAEWFIDIAIVAEPYFVPPDREDSWAGDVDGSVAIVMRQSAALPPLGMVARGSGYVVVRVNETVVIGVYFSPNRSLAEFERFLGGLEALVHRFESRPVILAGDFNAKCTAWGSPRTDSRGEFLSEWAFATGFCLLNRGSVATCVRWNGESHVDVSFASPSAARRVHGWRVLEGAETLSDHRFVRFELSVSTLLNAPDEDARGEEELPRSAPRSFPRWALKRLNKVLAVEAATVAAWAPMPARLVDVELEAEWFRGTMRRVCDAAMPLVSGRAPRGGAYWWTPEIALLREECVRARRRSARHRRRRLRDADFAEVATRLHADCRQKQEALRRAIGEAKSQSMKTLLETLDQDPWGRPYQTVRKKLRPWALPVTERLQPQQLREIVSGLFPRMERGFEPPSMGAPPRSSVSGDSPAEVVPLSISEEEIRAAVSRMRRKDAAPGPDGVHGRVWDLAFGALGDRLVRLYEACLESGRFPKQWKTGRLVLLRKEGRPADSPAGYRPIVLLDEAGKLLERVVAARIVQHLAGVGPDLSAEQFGFREGRSTIDAVMRVRALSDEAVGQGGVALAVSLDIANAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEDRSVVCTGHGGAVLRFPVQRGVPQGSVLGPILWNIGYDWVLRSALSAPLPGLSVVCYADDTLVVARGRDLRESARLSCAGVAFVIGRIRRLGLEVALDKSQALLFHGARRAPPQGAHLVIGGVRVEIEATGLRYLGLVLDGRWSFRTHFERLGPRLMAAAGSLSRLLPNVGGPDVVVRRLYTRVVRSMALYGAPVWCHALTRDNVAALRRPQRAIAVRAVRGYRTISFEAACVLAGTPPWDLEAGALAADYAWRCDLRSRGEPRPGAVEVRARKLQSRRAVLEAWSRRLADPAYGRRTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGRYLHLVARREPTPKCHHCSGCNEDTAEHTLAYCPAFAEQRRVLVAKIGPDLSLPTVVATMLGSDESWQAMLDFCESTISQKEAAERERESSSSLSAPCRRRRAGGRRRAFVQLQPL

Uniprot

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A0J7N1D9   + More
A0A2W1C3J5   O01419   A0A0J7KQK3   A0A3S2LNH8   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KRB8   A0A0J7NFZ0   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KJH4   A0A0J7KF37   A0A0J7KIM6   A0A0J7KF91   A0A0J7K3F1   A0A0J7KYD2   A0A0J7KPR0   A0A0J7MY17   A0A0J7KF40   A0A0J7N8R4   A0A0J7KQY4   A0A0J7KCD9   J9JWJ3   A0A0J7KIS5   X1WJY4   J9KJG8   A0A0J7MWN5   A0A2S2PEZ7   X1WZ64   J9KM84   J9LVU7   T1DCM0   A0A2H8TIE5   A0A2S2NQQ6   J9KT61   A0A0J7NC28   J9KNN8   A0A2H8TR36   J9KWM9   A0A2M4BBV9   W8ANK7   W8ADE4   J9LA43   T1DG89   T1DG59   Q868S4   A0A2M4BC01   A0A142LX45   X1WXT5   J9K6F0   F7IYV5   J9L0J0   A0A2S2PRL8   A0A139WN93   A0A139WNC9   J9LQQ1   A0A139W940   A0A2M4ADW9   A0A2M4BC28   A0A139WAH4   A0A139W9B3   F7IYU8   A0A2S2P7D1   A0A2M4CS98   A0A0J7KMG5   A0A034WR48   D6WC19   A0A2M4BC18   J9M6A5  

Pubmed

12644555    28756777    9092665    24330624    24495485    25527032    + More
18362917    19820115    25348373   

EMBL

AB090825    BAC57926.1    AB078935    BAC06462.1    AB078931    BAC06456.1    + More
AB078929    BAC06452.1    AB078930    BAC06454.1    LBMM01012027    KMQ86470.1    KZ149896    PZC78733.1    D85594    BAA19776.1    LBMM01004272    KMQ92618.1    RSAL01003504    RVE40273.1    LBMM01012412    KMQ86235.1    LBMM01008278    KMQ89009.1    LBMM01003988    KMQ92922.1    LBMM01005474    KMQ91485.1    LBMM01006671    KMQ90407.1    LBMM01006954    KMQ90166.1    LBMM01006657    KMQ90417.1    LBMM01008448    KMQ88867.1    LBMM01007036    KMQ90099.1    LBMM01008445    KMQ88871.1    LBMM01015025    KMQ84953.1    LBMM01002052    KMQ95336.1    LBMM01004634    KMQ92224.1    LBMM01014122    KMQ85315.1    LBMM01008422    KMQ88894.1    LBMM01008226    KMQ89040.1    LBMM01004262    KMQ92649.1    LBMM01009610    KMQ87992.1    ABLF02013358    ABLF02013361    ABLF02054869    LBMM01006977    KMQ90149.1    ABLF02011238    ABLF02041886    LBMM01015285    KMQ84870.1    GGMR01015159    MBY27778.1    ABLF02011183    ABLF02041884    ABLF02018942    ABLF02041885    ABLF02034925    GALA01001777    JAA93075.1    GFXV01002090    MBW13895.1    GGMR01006838    MBY19457.1    ABLF02009073    ABLF02030702    ABLF02042963    LBMM01006996    KMQ90130.1    ABLF02023257    GFXV01003903    MBW15708.1    ABLF02011927    GGFJ01001369    MBW50510.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    ABLF02018098    GALA01001776    JAA93076.1    GALA01000302    JAA94550.1    AB090815    BAC57906.1    GGFJ01001370    MBW50511.1    KU543683    AMS38371.1    ABLF02004854    ABLF02041317    ABLF02012448    ABLF02012450    ABLF02012455    ABLF02012460    AB593325    BAK38646.1    ABLF02027248    GGMR01019493    MBY32112.1    KQ971310    KYB29499.1    KYB29500.1    ABLF02030663    ABLF02041312    KQ972691    KXZ75806.1    GGFK01005660    MBW38981.1    GGFJ01001439    MBW50580.1    KQ971388    KYB24913.1    KQ972544    KXZ75869.1    AB593321    BAK38639.1    GGMR01012748    MBY25367.1    GGFL01004044    MBW68222.1    LBMM01005465    KMQ91492.1    GAKP01002292    JAC56660.1    KQ971309    EEZ99146.1    GGFJ01001453    MBW50594.1    ABLF02020969   

Proteomes

UP000036403    UP000283053    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF01421   Reprolysin
PF00098   zf-CCHC
PF00075   RNase_H

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       
IPR000663   Natr_peptide       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.40.390.10     3.30.420.10    

ProteinModelPortal

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A0J7N1D9   + More
A0A2W1C3J5   O01419   A0A0J7KQK3   A0A3S2LNH8   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KRB8   A0A0J7NFZ0   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KJH4   A0A0J7KF37   A0A0J7KIM6   A0A0J7KF91   A0A0J7K3F1   A0A0J7KYD2   A0A0J7KPR0   A0A0J7MY17   A0A0J7KF40   A0A0J7N8R4   A0A0J7KQY4   A0A0J7KCD9   J9JWJ3   A0A0J7KIS5   X1WJY4   J9KJG8   A0A0J7MWN5   A0A2S2PEZ7   X1WZ64   J9KM84   J9LVU7   T1DCM0   A0A2H8TIE5   A0A2S2NQQ6   J9KT61   A0A0J7NC28   J9KNN8   A0A2H8TR36   J9KWM9   A0A2M4BBV9   W8ANK7   W8ADE4   J9LA43   T1DG89   T1DG59   Q868S4   A0A2M4BC01   A0A142LX45   X1WXT5   J9K6F0   F7IYV5   J9L0J0   A0A2S2PRL8   A0A139WN93   A0A139WNC9   J9LQQ1   A0A139W940   A0A2M4ADW9   A0A2M4BC28   A0A139WAH4   A0A139W9B3   F7IYU8   A0A2S2P7D1   A0A2M4CS98   A0A0J7KMG5   A0A034WR48   D6WC19   A0A2M4BC18   J9M6A5  

PDB

1WDU     E-value=1.2624e-08,     Score=147

KEGG

101737582    no KO assigned | (RefSeq) uncharacterized LOC101737582

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0004523   GO:0005179   GO:0005576   GO:0006412   GO:0005737   GO:0006520   GO:0006508   GO:0008237   GO:0016020   GO:0003707   GO:0051537  

Length:

1315

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0161599999999999

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.00054

outside

1  -  1315

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

5.739759

CSRT

0

Interpretation

Uncertain