Gene

KWMTBOMO07426

Annotation

PREDICTED:_uncharacterized_protein_LOC105842156_[Bombyx_mori]

Location

Bomo_Chr12(-):12790988-12791318      View in EpiBrowser

Full name

Putative uncharacterized transposon-derived protein F52C9.6      

Location in the cell

Nuclear   Reliability : 0.932

CDS

ATGATTGCAAACTTGCGATATGCGAATGATACCACTTCATTTGCAACCAATGCGCAATCTTTGGAGAGGCTATTATTTAGGATGGTACGTATGTGTCTTGAGTTTGGATTGACGATTAATTGCAGTAAGACCAAAGTGATGATTATCGATCGCGCTAAGAATAACTCTTCGGACATGACTCAAATTGCGGGCTGTGACGTGGTCCAATCTTACATAATATAA

Protein

MIANLRYANDTTSFATNAQSLERLLFRMVRMCLEFGLTINCSKTKVMIIDRAKNNSSDMTQIAGCDVVQSYII

Keywords

Complete proteome   Reference proteome  

Feature

chain  Putative uncharacterized transposon-derived protein F52C9.6

Uniprot

D7F175   D7F167   D7F162   A0A2W1BGD9   D7F168   A0A2W1B3T2   + More
E2B0B8   A0A0J7K909   A0A0B7BT87   A0A2H1VU13   A0A0J7KGF7   A0A0J7NYI3   A0A2S2QJX2   A0A3S2L0R7   A0A2H1WMJ5   D7F172   A0A386TX63   W4XX34   A0A2S2QAF2   D7F174   A0A016SCZ1   A0A3P8SR08   W4Y7K2   W4ZJ58   A0A0B7BBR3   A0A2S2QPW9   A0A0J7KRQ5   A0A016SC01   A0A3S0Z5S0   Q10126   D5LB38  

Pubmed

20470440    28756777    20798317    25730766    9851916   

EMBL

FJ265560    ADI61828.1    FJ265552    ADI61820.1    FJ265547    ADI61815.1    + More
KZ150203    PZC72267.1    FJ265553    ADI61821.1    KZ150363    PZC71182.1    GL444493    EFN60870.1    LBMM01011686    KMQ86696.1    HACG01049257    CEK96122.1    ODYU01004401    SOQ44236.1    LBMM01007694    KMQ89503.1    LBMM01000801    KMQ97460.1    GGMS01008852    MBY78055.1    RSAL01000289    RVE42931.1    ODYU01009604    SOQ54152.1    FJ265557    ADI61825.1    MG566083    AYE92701.1    AAGJ04075166    AAGJ04075167    AAGJ04075168    GGMS01004979    MBY74182.1    FJ265559    ADI61827.1    JARK01001588    EYB88154.1    AAGJ04168767    AAGJ04089624    HACG01043934    CEK90799.1    GGMS01010623    MBY79826.1    LBMM01003995    KMQ92919.1    EYB88155.1    RQTK01001530    RUS69941.1    FO081435    GU815089    ADF18552.1   

Proteomes

UP000000311    UP000036403    UP000283053    UP000007110    UP000024635    UP000265080    + More
UP000271974    UP000001940   

PRIDE

D7F175    D7F167    D7F162    D7F168    D7F172    D7F174    + More
D5LB38   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00058   Ldl_recept_b
PF01457   Peptidase_M8

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR002138   Pept_C14_p10       
IPR000033   LDLR_classB_rpt       
IPR011042   6-blade_b-propeller_TolB-like       
IPR001577   Peptidase_M8       

SUPFAM

SSF56219   SSF56219       

Gene 3D

3.60.10.10     2.120.10.30    

ProteinModelPortal

D7F175   D7F167   D7F162   A0A2W1BGD9   D7F168   A0A2W1B3T2   + More
E2B0B8   A0A0J7K909   A0A0B7BT87   A0A2H1VU13   A0A0J7KGF7   A0A0J7NYI3   A0A2S2QJX2   A0A3S2L0R7   A0A2H1WMJ5   D7F172   A0A386TX63   W4XX34   A0A2S2QAF2   D7F174   A0A016SCZ1   A0A3P8SR08   W4Y7K2   W4ZJ58   A0A0B7BBR3   A0A2S2QPW9   A0A0J7KRQ5   A0A016SC01   A0A3S0Z5S0   Q10126   D5LB38  

KEGG

105842156    no KO assigned | (RefSeq) uncharacterized LOC105842156

GO

GO:0004519   GO:0003964   GO:0004197   GO:0016021   GO:0016020   GO:0007155   GO:0004222  

PANTHER

PTHR10942  

Length:

73

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04296

Exp number, first 60 AAs:

0.04296

Total prob of N-in:

0.52713

inside

1  -  73

 

 

Pi

13.51575

Theta

14.137531

Tajima's D

-0.039681

CLR

0

CSRT

0.36233188340583

Interpretation

Uncertain