Gene

KWMTBOMO07425

Pre Gene Modal

BGIBMGA005218

Annotation

PREDICTED:_uncharacterized_protein_LOC101738121?_partial_[Bombyx_mori]

Location

Bomo_Chr12(+):12640829-12658874      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.107

CDS

ATGTGGAATTTCATTTCGCAGAAGGAAGGAACGGATGCTGAACGATTGACAATAGAAGCAGCGACGCAAACAGCCAGCGGACGGTACACGTGCGAGGTGTCGGCAGACGCACCTTCATTCCAAACTGCACAAGTGCATACTCACATGTACGTTGTTGTTCTGCCTGTGGAAGGACCGGGACTACACGGCCTGAAGCGACGTTACCGACCGGGAAACACGCTCAAAGTGGAATGTGTCAGCTATAACTCGTTGCCGGCAGCGAACCTGTCGTTCTTCATAAACAGCGAACCGGCGTTGAGTCAGCATGTTATGCATCGAGTGGACGGCGACACCGAGGGTGGTACTATGTCTGCGTACAGCACTATGCAGTTCACGGTACAGAAACATCACTTCATCCGAGGGAAGATTAAGATTCGATGCACAGCCAACATATACTCTATCTACCTGAAGAGCCTCGAAAAAAGTGCCGAAGAAGAACGGATACGCACTACCCCAGCACCACTGCCAGAGGTTCACGAGGCCGTGGTGTATTCCATACATCGCCTGCCTGAGAACAGTAAGTTTCAACGTTCCAGTAACTCAGAGACTACCGACGAAGGTTAG

Protein

MWNFISQKEGTDAERLTIEAATQTASGRYTCEVSADAPSFQTAQVHTHMYVVVLPVEGPGLHGLKRRYRPGNTLKVECVSYNSLPAANLSFFINSEPALSQHVMHRVDGDTEGGTMSAYSTMQFTVQKHHFIRGKIKIRCTANIYSIYLKSLEKSAEEERIRTTPAPLPEVHEAVVYSIHRLPENSKFQRSSNSETTDEG

Similarity

Belongs to the CTL (choline transporter-like) family.

Uniprot

A0A3S2NYZ0   A0A194PVM1   A0A0A9WGX7   A0A195ETC6   A0A146MF49   E2B6Q0   + More
A0A0K2TL24   A0A158NEY9   A0A195E5L7   A0A088APN9   A0A026WLQ9   A0A151X1J1   A0A0C9RFU0   A0A195B473   A0A195CLL0   A0A154PC79   A0A310S9E3   A0A182RRC6   Q7PVI5   A0A067QSI5   A0A182KYZ9   A0A084WG07   A0A182L6D9   A0A1B6D8N3   A0A182UL54   A0A182W8W0   A0A182K2U7   Q179G5   A0A1B6CQX7   A0A182IZQ7   B0WFE6   A0A182QE29   A0A182IZD8   A0A3Q0IUE1   A0A0M9A1X5   A0A0K2T7Y0   A0A182HGG9   A0A182QXF6   A0A182J1N4   A0A182UFF8   A0A182LYG9   A0A182YDQ2   A0A182X0T3   E2BXN1   A0A182P4D2   A0A182VUH1   V9IMM6   A0A087ZYB0   A0A1B6L404   A0A154PRN6   D6WYA0   A0A182RIN8   B0XJD3   A0A182MUU6   A0A0P6HFI3   A0A182MNW7   A0A2P8Z7Y1   A0A0L7QSY1   A0A0P6BUE9   A0A0L7R0L4   A0A1Y1JZU7   A0A1B6CTZ7   E9IEP7   A0A0P6H9Y7   A0A1Y1KZB0   A0A182QWE7   A0A182NE32   A0A1Y1JZV1   E9H5W5   A0A1Y1K2U9   A0A182SIT5   A0A182F4L1   A0A182PJ75   A0A3F2YQ67   A0A182W9N2   A0A1I8MXF4   A0A067R8E3   A0A182RBL4   A0A2P8XME0   A0A182IRE1   A0A182L227   A0A154PS63   A0A182WT79   A0A1B6D6S4   A0A084VP22   A0A084VP25   A0A1A9XU18   A0A1B0BFZ6   A0A1S4F2H1   A0A158NPX3   Q17HG6   A0A310SFI0   Q7Q3L0   A0A182H6X9  

Pubmed

26354079    25401762    26823975    20798317    21347285    24508170    + More
30249741    12364791    24845553    20966253    24438588    17510324    25244985    18362917    19820115    29403074    28004739    21282665    21292972    25315136    26483478   

EMBL

RSAL01000020    RVE52645.1    KQ459592    KPI96809.1    GBHO01036968    GBRD01007821    + More
JAG06636.1    JAG58000.1    KQ981979    KYN31488.1    GDHC01000530    JAQ18099.1    GL446000    EFN88634.1    HACA01009392    CDW26753.1    ADTU01001494    ADTU01001495    ADTU01001496    KQ979609    KYN20144.1    KK107153    QOIP01000012    EZA56980.1    RLU15808.1    KQ982585    KYQ54281.1    GBYB01005891    JAG75658.1    KQ976625    KYM79009.1    KQ977642    KYN00959.1    KQ434870    KZC09529.1    KQ762927    OAD55260.1    AAAB01008984    EAA14672.5    KK853336    KDR08348.1    ATLV01023422    KE525343    KFB49151.1    GEDC01015245    JAS22053.1    CH477353    EAT42841.1    GEDC01021342    JAS15956.1    DS231917    EDS26183.1    AXCN02000773    KQ435760    KOX75630.1    HACA01004843    CDW22204.1    APCN01004227    AXCN02000654    AXCM01000084    GL451281    EFN79549.1    JR052631    AEY61744.1    GEBQ01021723    JAT18254.1    KQ435090    KZC14585.1    KQ971357    EFA07695.2    DS233487    EDS30221.1    AXCM01000083    GDIP01232685    GDIQ01033370    LRGB01000402    JAI90716.1    JAN61367.1    KZS19236.1    AXCM01003227    PYGN01000156    PSN52590.1    KQ414755    KOC61747.1    GDIP01010786    JAM92929.1    KQ414670    KOC64373.1    GEZM01096543    JAV54819.1    GEDC01020595    JAS16703.1    GL762655    EFZ20952.1    GDIQ01022565    JAN72172.1    GEZM01074057    JAV64686.1    GEZM01096541    JAV54822.1    GL732595    EFX72800.1    GEZM01096542    JAV54821.1    KK852813    KDR15839.1    PYGN01001730    PSN33155.1    AXCP01007901    KZC14587.1    GEDC01016023    GEDC01003567    JAS21275.1    JAS33731.1    ATLV01014966    KE524999    KFB39716.1    ATLV01014967    KFB39719.1    JXJN01013706    ADTU01022665    ADTU01022666    CH477249    EAT46096.1    KQ773583    OAD52370.1    AAAB01008964    EAA12775.4    JXUM01115440    KQ565880    KXJ70572.1   

Proteomes

UP000283053    UP000053268    UP000078541    UP000008237    UP000005205    UP000078492    + More
UP000005203    UP000053097    UP000279307    UP000075809    UP000078540    UP000078542    UP000076502    UP000075900    UP000007062    UP000027135    UP000075882    UP000030765    UP000075902    UP000075920    UP000075881    UP000008820    UP000075880    UP000002320    UP000075886    UP000079169    UP000053105    UP000075840    UP000075883    UP000076408    UP000076407    UP000075885    UP000007266    UP000076858    UP000245037    UP000053825    UP000075884    UP000000305    UP000075901    UP000069272    UP000095301    UP000092443    UP000092460    UP000069940    UP000249989   

Pfam

PF08205   C2-set_2        + More
PF00047   ig
PF07686   V-set
PF13895   Ig_2
PF05172   Nup35_RRM
PF04515   Choline_transpo

Interpro

IPR013783   Ig-like_fold        + More
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013162   CD80_C2-set       
IPR013151   Immunoglobulin       
IPR013106   Ig_V-set       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR035979   RBD_domain_sf       
IPR007846   RRM_NUP35_dom       
IPR007603   Choline_transptr-like       

SUPFAM

SSF48726   SSF48726        + More
SSF54928   SSF54928       

Gene 3D

2.60.40.10     3.30.70.330    

ProteinModelPortal

A0A3S2NYZ0   A0A194PVM1   A0A0A9WGX7   A0A195ETC6   A0A146MF49   E2B6Q0   + More
A0A0K2TL24   A0A158NEY9   A0A195E5L7   A0A088APN9   A0A026WLQ9   A0A151X1J1   A0A0C9RFU0   A0A195B473   A0A195CLL0   A0A154PC79   A0A310S9E3   A0A182RRC6   Q7PVI5   A0A067QSI5   A0A182KYZ9   A0A084WG07   A0A182L6D9   A0A1B6D8N3   A0A182UL54   A0A182W8W0   A0A182K2U7   Q179G5   A0A1B6CQX7   A0A182IZQ7   B0WFE6   A0A182QE29   A0A182IZD8   A0A3Q0IUE1   A0A0M9A1X5   A0A0K2T7Y0   A0A182HGG9   A0A182QXF6   A0A182J1N4   A0A182UFF8   A0A182LYG9   A0A182YDQ2   A0A182X0T3   E2BXN1   A0A182P4D2   A0A182VUH1   V9IMM6   A0A087ZYB0   A0A1B6L404   A0A154PRN6   D6WYA0   A0A182RIN8   B0XJD3   A0A182MUU6   A0A0P6HFI3   A0A182MNW7   A0A2P8Z7Y1   A0A0L7QSY1   A0A0P6BUE9   A0A0L7R0L4   A0A1Y1JZU7   A0A1B6CTZ7   E9IEP7   A0A0P6H9Y7   A0A1Y1KZB0   A0A182QWE7   A0A182NE32   A0A1Y1JZV1   E9H5W5   A0A1Y1K2U9   A0A182SIT5   A0A182F4L1   A0A182PJ75   A0A3F2YQ67   A0A182W9N2   A0A1I8MXF4   A0A067R8E3   A0A182RBL4   A0A2P8XME0   A0A182IRE1   A0A182L227   A0A154PS63   A0A182WT79   A0A1B6D6S4   A0A084VP22   A0A084VP25   A0A1A9XU18   A0A1B0BFZ6   A0A1S4F2H1   A0A158NPX3   Q17HG6   A0A310SFI0   Q7Q3L0   A0A182H6X9  

KEGG

101738121    no KO assigned | (RefSeq) uncharacterized LOC101738121

GO

GO:0016021   GO:0008045   GO:0051028   GO:0005643   GO:0003676  

PANTHER

PTHR12385  

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0450300000000001

Exp number, first 60 AAs:

0.0326

Total prob of N-in:

0.07982

outside

1  -  200

 

 

Pi

20.350831

Theta

19.652594

Tajima's D

-0.622657

CLR

0.532974

CSRT

0.209089545522724

Interpretation

Uncertain