Silkworm Genome Informatics Database

Gene

KWMTBOMO07420

Annotation

PREDICTED:_uncharacterized_protein_LOC106124311_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr12(+):12598649-12599706 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.051

CDS

ATGGAAGTCGGTTACGATTCGGAGAATAATGCAGATTTGCAACGTTCTCTCTGTCTTCGTAACGTCCACGTGGCGGTTCCTGAGGCGGTCGAACGAGGATCGAAGGTCGAGATGAAGTGCCTTTACGACCTGGAAAACGAAGTGTTGTACTCCGTCAAGTGGTATCGTGGGGACAGAGAGTTTTGCCGCTACTCCCCCAGAGATGTTCCTCCGCTTAAGATATTTCGTATTCCGGGAATCGAAGTTGACTTTGATGTTGAAAATTGTAAGGGCGCCGGTGCGCCTCACCCTCAAGGGTGCGGTGTTCATTTAATGCTTTGA

Protein

MEVGYDSENNADLQRSLCLRNVHVAVPEAVERGSKVEMKCLYDLENEVLYSVKWYRGDREFCRYSPRDVPPLKIFRIPGIEVDFDVENCKGAGAPHPQGCGVHLML

Uniprot

A0A3S2M6N0 A0A1A9VNR4 A0A0L0C2S8 A0A1B6M6F8 A0A1A9ZH04 A0A1B0GE72 + More
A0A1A9ZGY8 A0A2P8Z8P9 A0A0A9YBJ9 A0A0K8SST5 Q179G5 A0A3Q0ILA8 A0A2K8JMI5 A0A3Q0IUE1 A0A1B6DL93 E9IHU0 B0XIV7 A0A336LJ37 A0A182KZC9

Pubmed

26108605 29403074 25401762 26823975 17510324 21282665 + More
20966253

EMBL

RSAL01000020 RVE52644.1 JRES01000973 KNC26630.1 GEBQ01008472 JAT31505.1 + More
CCAG010012127 CCAG010012128 PYGN01000145 PSN52871.1 GBHO01013148 GBHO01013147 GBRD01005522 GDHC01002014 JAG30456.1 JAG30457.1 JAG60299.1 JAQ16615.1 GBRD01009456 JAG56368.1 CH477353 EAT42841.1 KY031268 ATU83019.1 GEDC01010861 JAS26437.1 GL763294 EFZ19870.1 DS233387 EDS29731.1 UFQT01000017 SSX17860.1

Proteomes

UP000283053 UP000078200 UP000037069 UP000092445 UP000092444 UP000245037 + More
UP000008820 UP000079169 UP000002320 UP000075882

Pfam

PF08205 C2-set_2 + More
PF07686 V-set

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold
IPR013162   CD80_C2-set
IPR003599   Ig_sub
IPR007110   Ig-like_dom
IPR003598   Ig_sub2
IPR013106   Ig_V-set

SUPFAM

SSF48726 SSF48726

Gene 3D

2.60.40.10

ProteinModelPortal

A0A3S2M6N0 A0A1A9VNR4 A0A0L0C2S8 A0A1B6M6F8 A0A1A9ZH04 A0A1B0GE72 + More
A0A1A9ZGY8 A0A2P8Z8P9 A0A0A9YBJ9 A0A0K8SST5 Q179G5 A0A3Q0ILA8 A0A2K8JMI5 A0A3Q0IUE1 A0A1B6DL93 E9IHU0 B0XIV7 A0A336LJ37 A0A182KZC9

KEGG

101740367 no KO assigned | (RefSeq) uncharacterized LOC101740367

GO

GO:0016021

Length:

106

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.27208

outside

1 - 106

Pi

33.301181

Theta

24.179201

Tajima's D

1.131569

CLR

0.618054

CSRT

0.702614869256537

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics