Silkworm Genome Informatics Database

Gene

KWMTBOMO07418

Annotation

PREDICTED:_uncharacterized_protein_LOC106132309_[Amyelois_transitella]

Location

Bomo_Chr12(+):12492640-12494211 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.683

CDS

ATGCCAGGCCTTTTTAATACATATCCGCATTCAGCACCAAATCTAAGACAGTTGAATCCAGATACCAATTTAAGTAGAAGGGCATGCTCTTGTGTAAGGGTTGAAAAAAAACAAGATTTAAAACATAAAGAAACAAAAGACAATATTGTTAGTTCTAACAATAATTTAATAAAAGTTTCTAAACAACCTACAAATAAGAAATGTGATCCAGTTTCTTTATATCACTATTACATGTCACTATGGGCCAAATATAAACCTAATGTACCAGGAGAAAATAATTGGTCTGACCTCAGGTGGCAAATTAGACAAAAAATGGCAGGAAGTTTTCCTAAACAAGGACCTAAGGTGCCTGTAATTAAAGGAAAAAATGAAGAAAATAGTTGA

Protein

MPGLFNTYPHSAPNLRQLNPDTNLSRRACSCVRVEKKQDLKHKETKDNIVSSNNNLIKVSKQPTNKKCDPVSLYHYYMSLWAKYKPNVPGENNWSDLRWQIRQKMAGSFPKQGPKVPVIKGKNEENS

Uniprot

S4PI38 A0A194PUZ4 A0A2A4K4G1 A0A194QN73 A0A2H1VZV1 A0A1E1W061 + More
A0A0L7LF79 A0A1Y1LET5 A0A1Y1LEQ4 A0A2J7R8L5 W5JH45 A0A1B6FYD5 A0A1B6JIT7 A0A1B6K2D4 A0A3P8WXB4 A0A226EZ09 A0A3P8WZ50

Pubmed

23622113 26354079 26227816 28004739 20920257 23761445 + More
24487278

EMBL

GAIX01005555 JAA87005.1 KQ459592 KPI96808.1 NWSH01000162 PCG78916.1 + More
KQ461194 KPJ06973.1 ODYU01005458 SOQ46338.1 GDQN01010686 JAT80368.1 JTDY01001329 KOB74183.1 GEZM01057703 JAV72133.1 GEZM01057704 JAV72132.1 NEVH01006721 PNF37169.1 ADMH02001514 ETN62235.1 GECZ01014567 JAS55202.1 GECU01008684 JAS99022.1 GECU01002118 JAT05589.1 LNIX01000001 OXA62071.1

Proteomes

UP000053268 UP000218220 UP000053240 UP000037510 UP000235965 UP000000673 + More
UP000265120 UP000198287

Pfam

PF15311 HYLS1_C

Interpro

IPR027918 HYLS1_C_dom + More
IPR026227 HYLS1

ProteinModelPortal

S4PI38 A0A194PUZ4 A0A2A4K4G1 A0A194QN73 A0A2H1VZV1 A0A1E1W061 + More
A0A0L7LF79 A0A1Y1LET5 A0A1Y1LEQ4 A0A2J7R8L5 W5JH45 A0A1B6FYD5 A0A1B6JIT7 A0A1B6K2D4 A0A3P8WXB4 A0A226EZ09 A0A3P8WZ50

KEGG

101746289 no KO assigned | (RefSeq) uncharacterized LOC101746289

GO

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7e-05

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04974

outside

1 - 127

Pi

25.983931

Theta

21.561026

Tajima's D

0.627279

CLR

0.636537

CSRT

0.551322433878306

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics