Gene

KWMTBOMO07416

Pre Gene Modal

BGIBMGA010317

Annotation

PREDICTED:_zinc_finger_protein_OZF_[Amyelois_transitella]

Location

Bomo_Chr12(-):12464821-12469939      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.66

CDS

ATGAATAAAATATGCCGAATATGTTTAGAAGAAGGCGTACTTACTTCAATATTTGCTAAAAATTTCAACATTTCGCTGTGTGACATGATAGAATATTGTTGTAACGTAAAGATAAGCAGAGATGATGGCTTGCCAGAGTTTATGTGCAGTAACTGCATGTACAAGTTAGGTGTGGCTTATCATTTCAAACAGACCTGCGAAAGTGCTGATATACGATTGAGGCAATATATCGGGCTGAGAATACCGAGCAAAACCGTAGATGCGATGGTGATGACAGATCCAATTGCTCCAACATATTCAACAATAATCAAAAGATGTAAATGTAAATTATCACAACAGAAACGAACACTATCGAATTACAAACGTAAACCGGAGTCTGAGAAGTTGAAACGAGGACCTAAACCGAAACCAAAGTCCGTACACTCTTGCTACCAGTGCAACAAACAGTTTAGGTGTCAAGCTCAATTGGAAATGCATATAAGAACACACACCGGTGACCGTCCGTTCGTTTGCATGTATTGCCCTCGTCGTTTTACCCAGAAACACAACCTGACGATACATCTTCGTATCCACACGGGGGAGAAACCATTCCAGTGCGAAGTGTGCAGTAAACGATTTTCTGCACAAGGAAATTTACAAGCCCATCTGAAAATTCACACAGGACAACGCGATCATGAATGTACGATATGCCACAAACAGTTCATCACATCCAGTGAATTAACGAGACACATTAGCAAACATCGCGGCGTTAAAAATTTTAAGTGCGATTTGTGCGAATCTGCCTACATACATTCAAGAGACCTTGGCCAAGGAGCATTACTTTCTTTGCACATTTAA

Protein

MNKICRICLEEGVLTSIFAKNFNISLCDMIEYCCNVKISRDDGLPEFMCSNCMYKLGVAYHFKQTCESADIRLRQYIGLRIPSKTVDAMVMTDPIAPTYSTIIKRCKCKLSQQKRTLSNYKRKPESEKLKRGPKPKPKSVHSCYQCNKQFRCQAQLEMHIRTHTGDRPFVCMYCPRRFTQKHNLTIHLRIHTGEKPFQCEVCSKRFSAQGNLQAHLKIHTGQRDHECTICHKQFITSSELTRHISKHRGVKNFKCDLCESAYIHSRDLGQGALLSLHI

Uniprot

A0A2A4K3T1   H9JLB6   A0A2H1VZW7   A0A212FLJ5   A0A1S4FJM4   Q16YL9   + More
A0A1B0D2V4   A0A1B0C900   W5JQ64   A0A084WBY0   Q7PW04   A0A182Q8M5   A0A194QNN6   A0A182V5U2   A0A182THE9   A0A1S4H086   A0A182M6D0   A0A1J1ISG3   A0A182IXH7   A0A0K8WL71   A0A0K8W5P0   W8CE77   B0W1H9   A0A034VPJ6   A0A0A1WFT6   A0A0L0C6I4   A0A1A9W3H2   A0A1A9V5W7   A0A1B0FA83   A0A1B0A729   A0A1A9XDA3   A0A1I8MWW7   A0A1B0BPC8   B5DHV6   B4GQM7   B4MZY8   B3MJP3   A0A3B0JMC2   A0A0M4EB47   A0A1I8QE83   B4I212   B4Q6Z6   Q9VJL7   B4NXP9   B3N656   A0A1W4VY55   B4LTD9   B4KI17   M9PD13   B4JAC2   A0A182SJW0   A0A0L7LFM9   A0A182GUH5   A0A1Q3FW78   A0A1S4FUZ1   A0A2A4JBW9   A0A182F5D7   D6WRY3   A0A182WH23   A0A182WYQ0   A0A182K5D2   A0A1E1WBG0   A0A182NZW0   D2A4T6   A0A1B0D188   A0A1B0DMW2   A0A182YFB8   B5DJ82   A0A1W4X3I9   A0A1Y1NMJ3   A0A1W4WSL7   A0A194QVI8   A0A3B0JM52   A0A1Y1N8Z0   A0A0T6B4K0   A0A1Y1NC21   A0A0R3NTS7   A0A1Y1NFH2   A0A1W4WK58   A0A0M4ERD2   Q7PW18   A0A2P8ZMJ0   A0A3B0JH55   A0A1Y1KR61   B4KH12  

Pubmed

19121390    22118469    17510324    20920257    23761445    24438588    + More
12364791    26354079    24495485    25348373    25830018    26108605    25315136    15632085    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26227816    26483478    18362917    19820115    25244985    28004739    29403074   

EMBL

NWSH01000162    PCG78915.1    BABH01037200    ODYU01005458    SOQ46337.1    AGBW02007778    + More
OWR54569.1    CH477514    EAT39716.1    AJVK01002870    AJVK01002871    AJVK01002872    AJWK01001673    ADMH02000797    ETN65035.1    ATLV01022517    KE525333    KFB47724.1    AAAB01008984    EAA14698.3    AXCN02000838    KQ461194    KPJ06969.1    AXCM01001497    CVRI01000057    CRL02500.1    GDHF01000391    JAI51923.1    GDHF01006119    JAI46195.1    GAMC01000676    JAC05880.1    DS231822    EDS25777.1    GAKP01013761    JAC45191.1    GBXI01016423    JAC97868.1    JRES01000836    KNC27857.1    CCAG010016035    JXJN01017888    CH379059    EDY69883.1    CH479187    EDW39899.1    CH963920    EDW77923.1    CH902620    EDV31382.2    OUUW01000006    SPP81472.1    CP012523    ALC39751.1    CH480820    EDW54569.1    CM000361    CM002910    EDX05204.1    KMY90492.1    AE014134    BT022180    AAF53516.2    AAY51574.1    CM000157    EDW89674.1    CH954177    EDV58094.1    CH940649    EDW63909.1    CH933807    EDW11299.1    AGB93029.1    CH916368    EDW03793.1    JTDY01001329    KOB74185.1    JXUM01089188    JXUM01089189    KQ563751    KXJ73380.1    GFDL01003181    JAV31864.1    NWSH01001952    PCG69587.1    KQ971351    EFA06600.1    GDQN01006714    JAT84340.1    KQ971344    EFA05179.2    AJVK01002455    AJVK01017014    CH379060    EDY70359.2    GEZM01001846    JAV97496.1    KQ461073    KPJ09553.1    SPP81412.1    GEZM01009670    JAV94414.1    LJIG01009821    KRT82313.1    GEZM01009666    JAV94420.1    KRT04514.1    GEZM01009699    GEZM01009668    JAV94417.1    CP012528    ALC48665.1    EAA14902.5    PYGN01000016    PSN57727.1    OUUW01000004    SPP80043.1    GEZM01080386    JAV62175.1    EDW12223.1   

Proteomes

UP000218220    UP000005204    UP000007151    UP000008820    UP000092462    UP000092461    + More
UP000000673    UP000030765    UP000007062    UP000075886    UP000053240    UP000075903    UP000075902    UP000075883    UP000183832    UP000075880    UP000002320    UP000037069    UP000091820    UP000078200    UP000092444    UP000092445    UP000092443    UP000095301    UP000092460    UP000001819    UP000008744    UP000007798    UP000007801    UP000268350    UP000092553    UP000095300    UP000001292    UP000000304    UP000000803    UP000002282    UP000008711    UP000192221    UP000008792    UP000009192    UP000001070    UP000075901    UP000037510    UP000069940    UP000249989    UP000069272    UP000007266    UP000075920    UP000076407    UP000075881    UP000075885    UP000076408    UP000192223    UP000245037   

PRIDE

H9JLB6    Q9VJL7   

Pfam

PF07776   zf-AD        + More
PF01546   Peptidase_M20
PF00096   zf-C2H2
PF07687   M20_dimer
PF12171   zf-C2H2_jaz

Interpro

IPR013087   Znf_C2H2_type        + More
IPR002933   Peptidase_M20       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR001261   ArgE/DapE_CS       
IPR010159   N-acyl_aa_amidohydrolase       
IPR011650   Peptidase_M20_dimer       
IPR036264   Bact_exopeptidase_dim_dom       
IPR022755   Znf_C2H2_jaz       
IPR011031   Multihaem_cyt       

SUPFAM

SSF57667   SSF57667        + More
SSF55031   SSF55031       

CDD

cd05646  M20_AcylaseI_like

ProteinModelPortal

A0A2A4K3T1   H9JLB6   A0A2H1VZW7   A0A212FLJ5   A0A1S4FJM4   Q16YL9   + More
A0A1B0D2V4   A0A1B0C900   W5JQ64   A0A084WBY0   Q7PW04   A0A182Q8M5   A0A194QNN6   A0A182V5U2   A0A182THE9   A0A1S4H086   A0A182M6D0   A0A1J1ISG3   A0A182IXH7   A0A0K8WL71   A0A0K8W5P0   W8CE77   B0W1H9   A0A034VPJ6   A0A0A1WFT6   A0A0L0C6I4   A0A1A9W3H2   A0A1A9V5W7   A0A1B0FA83   A0A1B0A729   A0A1A9XDA3   A0A1I8MWW7   A0A1B0BPC8   B5DHV6   B4GQM7   B4MZY8   B3MJP3   A0A3B0JMC2   A0A0M4EB47   A0A1I8QE83   B4I212   B4Q6Z6   Q9VJL7   B4NXP9   B3N656   A0A1W4VY55   B4LTD9   B4KI17   M9PD13   B4JAC2   A0A182SJW0   A0A0L7LFM9   A0A182GUH5   A0A1Q3FW78   A0A1S4FUZ1   A0A2A4JBW9   A0A182F5D7   D6WRY3   A0A182WH23   A0A182WYQ0   A0A182K5D2   A0A1E1WBG0   A0A182NZW0   D2A4T6   A0A1B0D188   A0A1B0DMW2   A0A182YFB8   B5DJ82   A0A1W4X3I9   A0A1Y1NMJ3   A0A1W4WSL7   A0A194QVI8   A0A3B0JM52   A0A1Y1N8Z0   A0A0T6B4K0   A0A1Y1NC21   A0A0R3NTS7   A0A1Y1NFH2   A0A1W4WK58   A0A0M4ERD2   Q7PW18   A0A2P8ZMJ0   A0A3B0JH55   A0A1Y1KR61   B4KH12  

PDB

2I13     E-value=5.80491e-21,     Score=247

KEGG

101745864    no KO assigned | (RefSeq) gastrula zinc finger protein XlCGF57.1

GO

GO:0008270   GO:0003676   GO:0005634   GO:0008237   GO:0005737   GO:0004046   GO:0006520   GO:0003700   GO:0000976   GO:0006355   GO:0046872   GO:0022891   GO:0004714   GO:0007169   GO:0016020   GO:0003707   GO:0051537  

Length:

278

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01213

Exp number, first 60 AAs:

0.01024

Total prob of N-in:

0.08441

outside

1  -  278

 

 

Pi

25.485981

Theta

22.048716

Tajima's D

0.275882

CLR

0.4991

CSRT

0.454477276136193

Interpretation

Uncertain