SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07413
Pre Gene Modal
BGIBMGA010350
Annotation
hypothetical_protein_KGM_04267_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 4.351
 

Sequence

CDS
ATGGCTGATATTCTTGATATATTAGACATAGAACAACCGGCAACAGAGATCAGCAGGGACAGTATTATACATGGCGATAAGAACAAAAAGAAATATGTTACCGCTAAAGCTGTCAAGAGGCCCGAGGGAATGCATAGGGAGGTTTTCGCATTACTTTATAATGACAATAAGGAATTACCTCCTTTACTGCCTACTGATACGGGAAAAGCATACAAACAGACAAAAGCCAGGCTTGGCATGAGGAAAGTCAGAAAATGGGTATGGGCACCATTTACTAATCCTGCACGTAAAGACAATGCAGTTTTCCACCACTGGAAGAGGGCATCTGATGAAGCTAAAGAATACCCCTTTGCACAATTCAATAAGCAAGTGTCAATACCATCTTATTCCGAGTCCGAATATAACCAATACTTAAAATCTGAAGATTGGAGTCAAGCAGAAACTGATCATCTGATGGATTTATGCCAACGTTTTGATTTGCGATTTATTGTAATACATGATCGATGGGACAGGGCTGCATTCAGAGATCGAAGTGTAGAAGATTTGAAGGAACGTTATTATAATATCTGCTCTATTCTGAGTAAGGTTAAGACTAATCCCTGGTCAAACACAGTTACAATGGTGAATGGCGAAAAACGCGTCTATCATTACGATGCTGAACATGAACGAAAGAGAAAGGAACAACTGCGAAGACTATTTGATCGCACTCAAGAACAGATCGATGAAGAGCAAATGCTGCTAGCTGAACTGAAAAAGATCGAAGCCAGGAAACGGGAAAGGGAAAGGAAAACTCAAGATTTACAGAAACTTATATCAAGAGCAGACAGCGGCACTATTACCCCATCAACTCCGACAAACCATAACACAGAGCCCCCAGGAACACCTTCAAGCATGGCTGCCAACATGAGGAGGCATGATCGGAAATTACATAAGAAGAAGATAACCACACAGCAAAGACCCATGCGTGCTGTGGAAAATGTGACAGTGGAGTGGTCAGGAATAAAGTTTCCGGAGGCTCGAGGAACTGGTGTATGGCTACGCTCTCAACGCATGAAACTGCCTCCTGGAGTAGGACAACGTAAAACGAAAGCTATTGAACAAGAGCTTCGACTAATGAACATAGATATAGCACCAACTCCAACTGAACCTATCTGCAAACATTTCAATGAGCTCCGCTCTGATCTGGCTTTGTCCATAGATCTGAAAAATGCTTTAGCATCCTGTGAGTTTGAATTGCAAGCTTTGCGCCACCAATATGAAGCTTTAAACCCGGGAAAGACCCTTACGATTCCAGCATCAATATGCAACACAAGTGTGGACAGTGACTCGAAACCAGTTGGTGAAATAATTGATGTGGTTGGTTCTCCTGGTGCAATGAATACAACCATATAG
Protein
MADILDILDIEQPATEISRDSIIHGDKNKKKYVTAKAVKRPEGMHREVFALLYNDNKELPPLLPTDTGKAYKQTKARLGMRKVRKWVWAPFTNPARKDNAVFHHWKRASDEAKEYPFAQFNKQVSIPSYSESEYNQYLKSEDWSQAETDHLMDLCQRFDLRFIVIHDRWDRAAFRDRSVEDLKERYYNICSILSKVKTNPWSNTVTMVNGEKRVYHYDAEHERKRKEQLRRLFDRTQEQIDEEQMLLAELKKIEARKRERERKTQDLQKLISRADSGTITPSTPTNHNTEPPGTPSSMAANMRRHDRKLHKKKITTQQRPMRAVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRLMNIDIAPTPTEPICKHFNELRSDLALSIDLKNALASCEFELQALRHQYEALNPGKTLTIPASICNTSVDSDSKPVGEIIDVVGSPGAMNTTI

Summary

EMBL
NWSH01000162    PCG78926.1    AGBW02012509    OWR44963.1    BABH01037198    GDQN01002362    + More
JAT88692.1    KQ459592    KPI96801.1    KQ461194    KPJ06966.1    RSAL01000139    RVE46145.1    ODYU01006866    SOQ49095.1    KK852607    KDR20356.1    NEVH01020943    PNF20428.1    GBHO01016053    GBHO01016052    GBRD01011039    GBRD01011038    GDHC01011286    JAG27551.1    JAG27552.1    JAG54785.1    JAQ07343.1    GEZM01036107    JAV82971.1    GL448512    EFN84493.1    APGK01036914    KB740945    ENN77469.1    GECL01001954    JAP04170.1    GBGD01001464    JAC87425.1    GBBI01005066    JAC13646.1    KB632197    ERL89986.1    GDKW01000298    JAI56297.1    GEDC01028504    GEDC01024031    GEDC01017891    GEDC01014722    JAS08794.1    JAS13267.1    JAS19407.1    JAS22576.1    GL435626    EFN72888.1    KQ971354    EFA07023.2    KZ288252    PBC31027.1    GEBQ01030177    JAT09800.1    KQ414617    KOC68135.1    PNF20429.1    AJWK01012066    ACPB03002860    GBYB01004389    GBYB01004776    JAG74156.1    JAG74543.1    UFQT01001519    SSX30893.1    GL888465    EGI60516.1    ADTU01012715    GFDF01003115    JAV10969.1    NNAY01001563    OXU23587.1    KF294267    AHZ08395.1    KQ977600    KYN01469.1    JXUM01000599    KQ560108    KXJ84491.1    AAAB01008807    EAA04266.4    ADMH02000243    ETN67268.1    APCN01000197    GFDF01003143    JAV10941.1    KQ982254    KYQ58767.1    KQ981820    KYN35159.1    KK107200    QOIP01000002    EZA55500.1    RLU25322.1    AXCN02000387    CH477638    EAT37953.1    GL732569    EFX76249.1    KQ981082    KYN09697.1    JRES01000956    KNC26765.1    DS232955    EDS26997.1    GGLE01005495    MBY09621.1    GFDL01011059    JAV23986.1    GDIP01109245    JAL94469.1    GDIP01212993    LRGB01003325    JAJ10409.1    KZS03193.1    JXUM01043698    KQ561372    KXJ78813.1    KQ434977    KZC12860.1    KQ435793    KOX74226.1    ATLV01024557    KE525352    KFB51622.1    GANO01002918    JAB56953.1    IAAA01018913    IAAA01018914    LAA04450.1    GDAI01002494    JAI15109.1    GDIQ01148778    JAL02948.1    GDIP01109244    JAL94470.1    GBXI01016129    JAC98162.1    GDIQ01159926    JAK91799.1    KA644714    AFP59343.1    GDIP01187142    JAJ36260.1    GDIP01236431    JAI86970.1    GDHF01002290    JAI50024.1    GAKP01007984    JAC50968.1    GAMC01005668    JAC00888.1    KQ976424    KYM88298.1    LBMM01007007    KMQ90124.1    JXJN01011768    CH954179    EDV55340.1    CH902619    EDV35998.1    GANP01007023    JAB77445.1    GEFM01002937    JAP72859.1    CCAG010012936    CM000158    EDW91365.1    CM000362    CM002911    EDX07948.1    KMY95311.1    CH480816    EDW48732.1    CH940662    EDW58863.1   
Pfam
PF05499   DMAP1        + More
PF16282   SANT_DAMP1_like
PF00059   Lectin_C
PF13850   ERGIC_N
PF07970   COPIIcoated_ERV
Interpro
IPR027109   Swc4/Dmap1        + More
IPR032563   DAMP1_SANT-like       
IPR008468   DMAP1       
IPR001005   SANT/Myb       
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR016187   CTDL_fold       
IPR009057   Homeobox-like_sf       
IPR012936   Erv_C       
IPR039542   Erv_N       
SUPFAM
SSF56436   SSF56436        + More
SSF46689   SSF46689       
Gene 3D
PDB
4IEJ     E-value=4.77988e-28,     Score=311

Ontologies

Topology

Length:
463
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00128
outside
1  -  463
 
 

Population Genetic Test Statistics

Pi
33.113207
Theta
27.735646
Tajima's D
0.562518
CLR
0.549783
CSRT
0.546022698865057
Interpretation
Uncertain
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