Gene

KWMTBOMO07410  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010319

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_xuthus]

Location

Bomo_Chr12(-):12390475-12413719      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.986

CDS

ATGAAATTGCCACCGGCTTTACTGAAACAGCTATGGCTGACTTTGGGTGCGTCACTATCTTTCCTTATAATCGGCCTGGTGCGAGGATACTCTGCATCAGCCATACCCTCAATAGAAAGCGAGGACTCACACATCATACAGAGTAGCGAGCAGAAATCATGGATCGGTGCGATTCCTCCACTAGGAGCGTTTGTTGGGAGCTTGTTATCAGGAGTCTTAATGCAGAGGCTCGGTCGTCGGCGGACTCTTCAACTCACTGCGCCTCTGTGGGTTGCGGGCTGGATAATTCTCGGTCTGGCCAAATACTTCCCCTTGATACTGCTGGGAAGAATGATCTCCGGTTTATGCGTCGGCTTCGCTCTTGCTCCAGCTCAAGTTTATGTGAGCGAATGCTGTGACCCTGAGATCCGTGGACGATTGGGTTCTTTACCGACCCTATCCATGTCTTTGGGCATTTTGCTATCCTACGTTGCTGGAAACTGGCTTTATTGGAGATATCTAGCTTTCTTCTCAGCGTTCTTTTGTGTTGCCCTTTTCCTGGCATTATTTTCGCTACCGGAATCTCCGGTATGGCTGGAGGCGCAAGGCCAAGATCCCGCTCCCGCTATCAAGTGGCTGCATCTTTCTGCTCGCGCTACCGCAGCTGTTGAAGATGATACACCCGAAAAATCTGAAGATCTAAATGAAAAGCCAAGTCTGTTCACTCGCAAAGTGTTCTTCTCTTCAGTGGTGATTAAACCACTCATCATTGGATTTGCACTGCTCTTCTTCCAACAATTCAGTGGTATCGATGCTGTCATTTTCTTTACTGTGGAAATCTTCGAAAGTGCTGGTAGCAAATTAGATGCAATGACAGCGACGATTATCATTGGCTTGGTTCAGTTGGTGTGTAACGGTGTAAGCACGCTATTAGTCGACCGTGCGGGCAGAAGGCCTTTGCTGCTCGTCTCTGCGGCAATCATGTCGATGTCCATGGGCTCTATGGGAGCAGCATTCTATTTTGAGTTCGAAAATTCTTCATTCTTGGGATACCTACCCGTAATAAGTCTGGTGGTGTTTATGGTCGGGTTCTCGTTAGGATTTGGTGGTCTCCCGTTCCTGTTGCTCGGAGAGTTGTTCCCGGCGCACCACAGGTCCCAGCTCTCGGCCATGGCCAGCGCCGTCAATCTCCTGTCCATGTTCACCGTCATCAAGTCTTATCATGCTCTTGAAAGGGTATTGACATCAGCCGGAACGTTCTGGATGTATTCGTGTTTCTGCGCCATCGCGTTCTTCTTCGTTCTGTTCCTAGTCCCGGAGACCAAAGGCAAGTCGTTGGCCGAGATCGAACAACACTTCCGCGGCAAGAAATCCAAAGAGCGAGTGCAAATGCAGACTGTCGCAACTGTGTTTTAA

Protein

MKLPPALLKQLWLTLGASLSFLIIGLVRGYSASAIPSIESEDSHIIQSSEQKSWIGAIPPLGAFVGSLLSGVLMQRLGRRRTLQLTAPLWVAGWIILGLAKYFPLILLGRMISGLCVGFALAPAQVYVSECCDPEIRGRLGSLPTLSMSLGILLSYVAGNWLYWRYLAFFSAFFCVALFLALFSLPESPVWLEAQGQDPAPAIKWLHLSARATAAVEDDTPEKSEDLNEKPSLFTRKVFFSSVVIKPLIIGFALLFFQQFSGIDAVIFFTVEIFESAGSKLDAMTATIIIGLVQLVCNGVSTLLVDRAGRRPLLLVSAAIMSMSMGSMGAAFYFEFENSSFLGYLPVISLVVFMVGFSLGFGGLPFLLLGELFPAHHRSQLSAMASAVNLLSMFTVIKSYHALERVLTSAGTFWMYSCFCAIAFFFVLFLVPETKGKSLAEIEQHFRGKKSKERVQMQTVATVF

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9JLB8   A0A2A4K574   A0A194PUY3   A0A212ESC5   A0A194QNN2   A0A3S2THF0   + More
A0A0L7LV25   A0A336LN31   A0A336K8X1   B0WAS9   A0A1Q3FR69   A0A1Q3FR72   A0A1Q3FQT2   A0A1Q3FQM9   A0A182YJC5   A0A182R708   A0A182JTR7   A0A182V872   A0A182TRE6   A0A182MU21   A0A182HGY0   A0A182WEI2   A0A2J7Q086   Q7PZ14   A0A023ETX6   A0A2P8YE93   Q173Q9   A0A182XKM4   A0A182PC87   A0A182N2H2   A0A182Q0V3   A0A182FUT2   A0A2J7Q079   A0A0A9WHG7   A0A1B0D0W2   W5JSA5   A0A146MF25   A0A182JL13   A0A0A8J7Z3   A0A1B6FF03   A0A084VIE7   A0A182L4C4   A0A1B0CJD4   A0A2R7W3G6   A0A1B6MCG2   A0A1B6JRZ9   A0A0P5KQD6   A0A0P5MCU9   A0A0P5ZNK2   A0A0P5NYS6   A0A0P5U8I0   A0A0P5Q269   A0A0N7ZF46   A0A2R7WFI5   A0A0P5B6L6   A0A0P5V8Y8   A0A164WYW2   A0A0P5HTI0   A0A0P5NHA1   A0A0P5P763   A0A0P5Q9B5   A0A0P5PUU0   A0A0P5BHC4   A0A0P5QBL0   A0A0P5G8S8   A0A0P5TVX3   A0A0P6FCV7   A0A0P6F5R7   A0A0N8BDM4   A0A0P5GJJ4   A0A0P5L1U0   A0A0P5QMI6   A0A0P6BFE2   A0A0P5PLJ3   A0A0P5R2N7   A0A0P5JY42   A0A0P6CII6   A0A0P5QEE0   A0A0P5RGC4   A0A3S2LNJ6   A0A0P5HE53   A0A0P6I127   E9G8D7   A0A0P6FAR9   A0A0N8AZ21   A0A0L7L5H4   A0A0P5AC65   A0A0P6DUK2   A0A0P6GBJ5   A0A0P5HUI3   A0A0P5HZY3   A0A0P5HNP5   A0A0P5HTB2   A0A0P6G5G0   E9HU50   A0A0P4ZJC7   A0A0P6I589   A0A0P4Z9E8   A0A0P5V361   A0A0P6ID11  

Pubmed

19121390    26354079    22118469    26227816    25244985    12364791    + More
24945155    29403074    17510324    25401762    26823975    20920257    23761445    24438588    20966253    21292972   

EMBL

BABH01037192    NWSH01000162    PCG78923.1    KQ459592    KPI96798.1    AGBW02012825    + More
OWR44388.1    KQ461194    KPJ06964.1    RSAL01000139    RVE46126.1    JTDY01000039    KOB79239.1    UFQS01000092    UFQT01000092    SSW99214.1    SSX19594.1    SSW99213.1    SSX19593.1    DS231875    EDS41795.1    GFDL01005079    JAV29966.1    GFDL01005053    JAV29992.1    GFDL01005189    JAV29856.1    GFDL01005176    JAV29869.1    AXCM01003634    APCN01002367    NEVH01019998    PNF21989.1    AAAB01008986    EAA00084.4    GAPW01001252    JAC12346.1    PYGN01000666    PSN42565.1    CH477418    EAT41278.1    AXCN02001073    PNF21990.1    GBHO01036395    GDHC01005218    JAG07209.1    JAQ13411.1    AJVK01021731    ADMH02000317    ETN66996.1    GDHC01001419    JAQ17210.1    AB901067    BAQ02367.1    GECZ01021085    JAS48684.1    ATLV01013354    KE524854    KFB37741.1    AJWK01014495    KK854292    PTY14264.1    GEBQ01006362    JAT33615.1    GECU01005740    JAT01967.1    GDIQ01188068    JAK63657.1    GDIQ01219156    GDIQ01181410    GDIQ01130834    JAK70315.1    GDIP01054610    JAM49105.1    GDIQ01142832    JAL08894.1    GDIP01116540    JAL87174.1    GDIQ01126786    JAL24940.1    GDIP01251569    JAI71832.1    KK854586    PTY17145.1    GDIP01188780    JAJ34622.1    GDIP01103045    JAM00670.1    LRGB01001036    KZS13711.1    GDIQ01223153    JAK28572.1    GDIQ01164688    JAK87037.1    GDIQ01139084    JAL12642.1    GDIQ01120436    JAL31290.1    GDIQ01123037    JAL28689.1    GDIP01188828    JAJ34574.1    GDIQ01123038    JAL28688.1    GDIQ01244654    JAK07071.1    GDIP01123700    JAL80014.1    GDIQ01208910    GDIQ01191849    GDIQ01191848    GDIQ01148541    GDIQ01148540    GDIQ01148539    GDIQ01142833    GDIQ01142830    GDIQ01133590    GDIQ01132098    GDIQ01101245    GDIQ01087603    GDIQ01085847    GDIQ01053520    GDIQ01051872    GDIQ01050467    JAN42865.1    GDIQ01226811    GDIQ01208911    GDIQ01208909    GDIQ01202066    GDIQ01202065    GDIQ01170164    GDIQ01148538    GDIQ01132099    GDIQ01126787    GDIQ01126784    GDIQ01101244    GDIQ01053522    GDIQ01053521    GDIQ01053519    GDIQ01051874    GDIQ01051873    GDIQ01051871    GDIQ01050468    GDIQ01050466    JAN41218.1    GDIQ01188067    JAK63658.1    GDIQ01240705    GDIQ01216952    GDIQ01198250    GDIQ01142831    GDIQ01085846    JAK11020.1    GDIQ01240704    GDIQ01238989    GDIQ01181409    JAK70316.1    GDIQ01112193    JAL39533.1    GDIP01030098    JAM73617.1    GDIQ01132097    GDIQ01130833    GDIQ01126785    GDIQ01110442    JAL24941.1    GDIQ01112194    JAL39532.1    GDIQ01218064    JAK33661.1    GDIQ01090639    JAN04098.1    GDIQ01136629    JAL15097.1    GDIQ01120437    JAL31289.1    RSAL01000047    RVE50499.1    GDIQ01228890    JAK22835.1    GDIQ01010973    JAN83764.1    GL732535    EFX84290.1    GDIQ01050469    JAN44268.1    GDIQ01228891    JAK22834.1    JTDY01002864    KOB70581.1    GDIP01201135    JAJ22267.1    GDIQ01082855    JAN11882.1    GDIQ01046056    JAN48681.1    GDIQ01223151    JAK28574.1    GDIQ01225657    JAK26068.1    GDIQ01224457    JAK27268.1    GDIQ01229044    JAK22681.1    GDIQ01038171    JAN56566.1    GL732796    EFX64731.1    GDIP01215827    JAJ07575.1    GDIQ01010267    JAN84470.1    GDIP01215826    JAJ07576.1    GDIP01105840    JAL97874.1    GDIQ01006323    JAN88414.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000283053    + More
UP000037510    UP000002320    UP000076408    UP000075900    UP000075881    UP000075903    UP000075902    UP000075883    UP000075840    UP000075920    UP000235965    UP000007062    UP000245037    UP000008820    UP000076407    UP000075885    UP000075884    UP000075886    UP000069272    UP000092462    UP000000673    UP000075880    UP000030765    UP000075882    UP000092461    UP000076858    UP000000305   

PRIDE

H9JLB8   

Pfam

PF00083   Sugar_tr        + More
PF00450   Peptidase_S10

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR029058   AB_hydrolase       
IPR001563   Peptidase_S10       
IPR002893   Znf_MYND       

SUPFAM

SSF103473   SSF103473        + More
SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

CDD

cd06174  MFS

ProteinModelPortal

H9JLB8   A0A2A4K574   A0A194PUY3   A0A212ESC5   A0A194QNN2   A0A3S2THF0   + More
A0A0L7LV25   A0A336LN31   A0A336K8X1   B0WAS9   A0A1Q3FR69   A0A1Q3FR72   A0A1Q3FQT2   A0A1Q3FQM9   A0A182YJC5   A0A182R708   A0A182JTR7   A0A182V872   A0A182TRE6   A0A182MU21   A0A182HGY0   A0A182WEI2   A0A2J7Q086   Q7PZ14   A0A023ETX6   A0A2P8YE93   Q173Q9   A0A182XKM4   A0A182PC87   A0A182N2H2   A0A182Q0V3   A0A182FUT2   A0A2J7Q079   A0A0A9WHG7   A0A1B0D0W2   W5JSA5   A0A146MF25   A0A182JL13   A0A0A8J7Z3   A0A1B6FF03   A0A084VIE7   A0A182L4C4   A0A1B0CJD4   A0A2R7W3G6   A0A1B6MCG2   A0A1B6JRZ9   A0A0P5KQD6   A0A0P5MCU9   A0A0P5ZNK2   A0A0P5NYS6   A0A0P5U8I0   A0A0P5Q269   A0A0N7ZF46   A0A2R7WFI5   A0A0P5B6L6   A0A0P5V8Y8   A0A164WYW2   A0A0P5HTI0   A0A0P5NHA1   A0A0P5P763   A0A0P5Q9B5   A0A0P5PUU0   A0A0P5BHC4   A0A0P5QBL0   A0A0P5G8S8   A0A0P5TVX3   A0A0P6FCV7   A0A0P6F5R7   A0A0N8BDM4   A0A0P5GJJ4   A0A0P5L1U0   A0A0P5QMI6   A0A0P6BFE2   A0A0P5PLJ3   A0A0P5R2N7   A0A0P5JY42   A0A0P6CII6   A0A0P5QEE0   A0A0P5RGC4   A0A3S2LNJ6   A0A0P5HE53   A0A0P6I127   E9G8D7   A0A0P6FAR9   A0A0N8AZ21   A0A0L7L5H4   A0A0P5AC65   A0A0P6DUK2   A0A0P6GBJ5   A0A0P5HUI3   A0A0P5HZY3   A0A0P5HNP5   A0A0P5HTB2   A0A0P6G5G0   E9HU50   A0A0P4ZJC7   A0A0P6I589   A0A0P4Z9E8   A0A0P5V361   A0A0P6ID11  

PDB

4JA4     E-value=3.16117e-25,     Score=286

KEGG

101744753    K14258 facilitated trehalose transporter | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0016021   GO:0022857   GO:0008643   GO:0004185   GO:0005887   GO:0005351   GO:0005215   GO:0016020   GO:0022891   GO:0004714   GO:0007169   GO:0003707   GO:0051537   GO:0055085  

Length:

464

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

235.53811

Exp number, first 60 AAs:

28.12322

Total prob of N-in:

0.72506

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  53

TMhelix

54  -  73

inside

74  -  85

TMhelix

86  -  108

outside

109  -  160

TMhelix

161  -  183

inside

184  -  237

TMhelix

238  -  260

outside

261  -  282

TMhelix

283  -  305

inside

306  -  311

TMhelix

312  -  334

outside

335  -  346

TMhelix

347  -  369

inside

370  -  380

TMhelix

381  -  403

outside

404  -  412

TMhelix

413  -  432

inside

433  -  464

 

 

Pi

22.884357

Theta

18.009352

Tajima's D

0.48216

CLR

1.342118

CSRT

0.514674266286686

Interpretation

Uncertain