Gene

KWMTBOMO07398  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010325

Annotation

hypothetical_protein_KGM_15740_[Danaus_plexippus]

Location

Bomo_Chr12(-):12031541-12034624      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.502

CDS

ATGTATGTCAAAAAAGAAAAACAGGAGGCGCTTGACCGAGAAAGAAAAAAACAACTTGGAAAAGCAAAAATAGGTGGCAGTTTTGAGCTAGTAAATTCGGAGGGCAAATTAGTTAAAAGCGCTGACTTCTTAGGAAAATGGATGTTAATCTATTTTGGCTTCACTCACTGCCCAGATATTTGTCCAGATGAGTTGGAAAAGTTAGCCGAAGTTGTGGATTTACATGACAAAACTCCATCATCACCACCTTTGCAACCAGTCTTCATATCAGTAGACCCTCAGAGGGACACACCAGAATTAGTTGGCAAGTACTGTAAGGAGTTTACACCAAGACTGCTAGGTTTAACTGGAACAAAGGAACAAGTCCAGCAAGCTTGCAAGTCTTATAGAGTGTACTTCAGTGCCGGGCCACAAGATGTTGACAATGATTATATTGTTGACCACACCATTATAGTTTATTTAGTTAATCCAGATGGTGAATTTGTCGATTATTATGGACAGAATAGGAATGCCAAAGAAATTTATGAATCAATGTTAGTGAACATTAAGAAATATGAAGCTGCAAAGAAATCAACATGGTTTTAA

Protein

MYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVDNDYIVDHTIIVYLVNPDGEFVDYYGQNRNAKEIYESMLVNIKKYEAAKKSTWF

Uniprot

H9JLC4   A0A212F3K8   A0A2A4K4S8   A0A194R434   A0A2H1W4F8   A0A194PTZ4   + More
A0A0L7LFA4   A0A0A1X740   A0A034WVN6   W8C8M3   B4LUA4   D6X1W2   B4KGY0   A0A0M4ENY4   B4N0L1   B4I196   Q9VMX4   B3MVL5   B4Q355   B4JB44   A0A182JLU0   A0A1I8MNB3   A0A2M3ZJK5   B3N4C8   A0A1W4WUZ7   A0A1W4X4H4   A0A182F2T3   A0A1W4UID2   A0A0L0CG28   A0A2M4BWC4   A0A2M4AMU4   Q29L20   B4GSH0   A0A182KWM5   Q7PPN7   A0A182Y8I5   A0A084VMR5   W5JG89   B4NW97   A0A182VMX4   A0A1A9V9Z9   A0A182X502   A0A182QY85   A0A182PYP2   A0A1I8Q8I3   A0A182IB58   A0A182VTM2   A0A182TEA3   A0A182RA75   A0A069DY37   A0A3B0JHX3   A0A182JUD7   A0A182NB69   J3JW95   A0A0K8TTD3   A0A1B0G468   A0A0V0G991   A0A182MS83   A0A1Y1KAS3   A0A224XW88   A0A1Q3FA17   U4UNR9   A0A1A9WAK8   A0A0P6J142   A0A182GUF6   A0A023EP93   B0W6Z1   A0A1L8E020   A0A1B0DJV4   A0A1B6C057   A0A2J7QG41   A0A0P4VQS1   A0A0P5U7G7   A0A1J1IJQ1   A0A0P6I590   L7M7R2   A0A0K8R7L9   A0A131Y3G6   A0A0P6HGE6   A0A0A9WAF2   B7P8T9   A0A023FV46   A0A131XB86   A0A131Z2F7   A0A224Z6Y6   A0A336MIH5   T1HYY4   R4WD18   A0A067QNN5   A0A1B6GM01   A0A087ZSW3   E9H4E8   G3MTE1   A0A1D2N4P4   A0A2R7VTC4   A0A0P5ZTT6   T1J9I2   A0A293MW99   A0A0P4VWD1   A0A023FFG7  

Pubmed

19121390    22118469    26354079    26227816    25830018    25348373    + More
24495485    17994087    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25315136    26108605    15632085    20966253    12364791    14747013    17210077    25244985    24438588    20920257    23761445    17550304    26334808    22516182    26369729    28004739    23537049    26999592    26483478    24945155    27129103    25576852    25401762    26823975    28049606    26830274    28797301    23691247    24845553    21292972    22216098    27289101   

EMBL

BABH01037155    AGBW02010564    OWR48302.1    NWSH01000173    PCG78773.1    KQ460845    + More
KPJ12005.1    ODYU01006279    ODYU01009075    SOQ47975.1    SOQ53233.1    KQ459592    KPI96787.1    JTDY01001427    KOB73881.1    GBXI01007809    JAD06483.1    GAKP01001109    JAC57843.1    GAMC01002914    JAC03642.1    CH940649    EDW64091.2    KQ971371    EFA10817.2    CH933807    EDW11180.2    CP012523    ALC38195.1    CH963920    EDW77624.1    CH480820    EDW54303.1    AE014134    AY089369    AAF52184.1    AAL90107.1    CH902624    EDV33280.1    CM000361    CM002910    EDX03771.1    KMY88185.1    CH916368    EDW03936.1    GGFM01007938    MBW28689.1    CH954177    EDV57798.1    JRES01000438    KNC31201.1    GGFJ01008235    MBW57376.1    GGFK01008794    MBW42115.1    CH379061    EAL33004.1    CH479189    EDW25329.1    AAAB01008944    EAA10098.4    ATLV01014621    KE524975    KFB39259.1    ADMH02001599    ETN61890.1    CM000157    EDW88414.1    AXCN02000637    APCN01000642    GBGD01002605    JAC86284.1    OUUW01000006    SPP81947.1    BT127513    AEE62475.1    GDAI01000182    JAI17421.1    CCAG010018118    GECL01002130    JAP03994.1    AXCM01004246    GEZM01087779    JAV58484.1    GFTR01004205    JAW12221.1    GFDL01010621    JAV24424.1    KB632294    ERL91670.1    GDUN01000227    JAN95692.1    JXUM01089073    KQ563744    KXJ73395.1    JXUM01139649    GAPW01003299    KQ568932    JAC10299.1    KXJ68834.1    DS231851    EDS37265.1    GFDF01002088    JAV11996.1    AJVK01001125    GEDC01030395    GEDC01002271    JAS06903.1    JAS35027.1    NEVH01014835    PNF27567.1    GDKW01003095    JAI53500.1    GDIP01116960    JAL86754.1    CVRI01000054    CRL00416.1    GDIQ01058828    GDIQ01009171    LRGB01000469    JAN35909.1    JAN85566.1    KZS19002.1    GACK01005841    JAA59193.1    GADI01006930    JAA66878.1    GEFM01003355    JAP72441.1    GDIQ01019831    JAN74906.1    GBHO01041778    GBHO01041777    GBHO01041775    GBHO01041774    GBRD01016241    GBRD01008684    GBRD01005340    GDHC01019276    GDHC01017984    GDHC01014566    JAG01826.1    JAG01827.1    JAG01829.1    JAG01830.1    JAG49585.1    JAP99352.1    JAQ00645.1    JAQ04063.1    ABJB010028230    ABJB010585655    ABJB010600406    ABJB010894693    DS659895    EEC03011.1    GBBL01001966    JAC25354.1    GEFH01004208    JAP64373.1    GEDV01003637    JAP84920.1    GFPF01011058    MAA22204.1    UFQT01001365    SSX30214.1    ACPB03021331    AK417323    BAN20538.1    KK853191    KDR10019.1    GECZ01006322    JAS63447.1    GL732591    EFX73415.1    JO845142    AEO36759.1    LJIJ01000221    ODN00247.1    KK854074    PTY10762.1    GDIP01042924    JAM60791.1    JH431975    GFWV01020364    MAA45092.1    GDRN01109486    JAI57069.1    GBBK01004642    JAC19840.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268    UP000037510    + More
UP000008792    UP000007266    UP000009192    UP000092553    UP000007798    UP000001292    UP000000803    UP000007801    UP000000304    UP000001070    UP000075880    UP000095301    UP000008711    UP000192223    UP000069272    UP000192221    UP000037069    UP000001819    UP000008744    UP000075882    UP000007062    UP000076408    UP000030765    UP000000673    UP000002282    UP000075903    UP000078200    UP000076407    UP000075886    UP000075885    UP000095300    UP000075840    UP000075920    UP000075902    UP000075900    UP000268350    UP000075881    UP000075884    UP000092444    UP000075883    UP000030742    UP000091820    UP000069940    UP000249989    UP000002320    UP000092462    UP000235965    UP000183832    UP000076858    UP000001555    UP000015103    UP000027135    UP000005203    UP000000305    UP000094527   

PRIDE

H9JLC4    Q9VMX4    G3MTE1   

Pfam

PF02630   SCO1-SenC        + More
PF01193   RNA_pol_L
PF01000   RNA_pol_A_bac

Interpro

IPR017276   Synth_of_cyt-c-oxidase_Sco1/2        + More
IPR013766   Thioredoxin_domain       
IPR036249   Thioredoxin-like_sf       
IPR003782   SCO1/SenC       
IPR036643   RNApol_insert_sf       
IPR011263   DNA-dir_RNA_pol_RpoA/D/Rpb3       
IPR011262   DNA-dir_RNA_pol_insert       
IPR033901   RNAPI/II_AC40       
IPR036603   RBP11-like       

SUPFAM

SSF52833   SSF52833        + More
SSF55257   SSF55257       
SSF56553   SSF56553       

Gene 3D

2.170.120.12    

CDD

cd02968  SCO
cd07032  RNAP_I_II_AC40

ProteinModelPortal

H9JLC4   A0A212F3K8   A0A2A4K4S8   A0A194R434   A0A2H1W4F8   A0A194PTZ4   + More
A0A0L7LFA4   A0A0A1X740   A0A034WVN6   W8C8M3   B4LUA4   D6X1W2   B4KGY0   A0A0M4ENY4   B4N0L1   B4I196   Q9VMX4   B3MVL5   B4Q355   B4JB44   A0A182JLU0   A0A1I8MNB3   A0A2M3ZJK5   B3N4C8   A0A1W4WUZ7   A0A1W4X4H4   A0A182F2T3   A0A1W4UID2   A0A0L0CG28   A0A2M4BWC4   A0A2M4AMU4   Q29L20   B4GSH0   A0A182KWM5   Q7PPN7   A0A182Y8I5   A0A084VMR5   W5JG89   B4NW97   A0A182VMX4   A0A1A9V9Z9   A0A182X502   A0A182QY85   A0A182PYP2   A0A1I8Q8I3   A0A182IB58   A0A182VTM2   A0A182TEA3   A0A182RA75   A0A069DY37   A0A3B0JHX3   A0A182JUD7   A0A182NB69   J3JW95   A0A0K8TTD3   A0A1B0G468   A0A0V0G991   A0A182MS83   A0A1Y1KAS3   A0A224XW88   A0A1Q3FA17   U4UNR9   A0A1A9WAK8   A0A0P6J142   A0A182GUF6   A0A023EP93   B0W6Z1   A0A1L8E020   A0A1B0DJV4   A0A1B6C057   A0A2J7QG41   A0A0P4VQS1   A0A0P5U7G7   A0A1J1IJQ1   A0A0P6I590   L7M7R2   A0A0K8R7L9   A0A131Y3G6   A0A0P6HGE6   A0A0A9WAF2   B7P8T9   A0A023FV46   A0A131XB86   A0A131Z2F7   A0A224Z6Y6   A0A336MIH5   T1HYY4   R4WD18   A0A067QNN5   A0A1B6GM01   A0A087ZSW3   E9H4E8   G3MTE1   A0A1D2N4P4   A0A2R7VTC4   A0A0P5ZTT6   T1J9I2   A0A293MW99   A0A0P4VWD1   A0A023FFG7  

PDB

2GVP     E-value=4.35402e-54,     Score=530

KEGG

101744321    K07152 protein SCO1/2 | (RefSeq) protein SCO1 homolog, mitochondrial

GO

GO:0005743   GO:0006878   GO:0006825   GO:0005507   GO:0008535   GO:0045454   GO:0005623   GO:0016021   GO:2001171   GO:0033617   GO:0004129   GO:0017004   GO:0016531   GO:0005739   GO:0015035   GO:0046983   GO:0003899   GO:0006351   GO:0005840   GO:0016787   GO:0003676   GO:0016780   GO:0000398   GO:0003723   GO:0005215   GO:0043022   GO:0005488   GO:0003707   GO:0051537  

PANTHER

PTHR12151   PTHR11800:SF13  

Length:

194

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00487

Exp number, first 60 AAs:

0.00433

Total prob of N-in:

0.39382

outside

1  -  194

 

 

Pi

16.143436

Theta

21.216674

Tajima's D

-0.699908

CLR

0.009102

CSRT

0.197390130493475

Interpretation

Uncertain