SGID The Silkworm Genome Information Database
Gene
KWMTBOMO07392
Pre Gene Modal
BGIBMGA010339
Annotation
PREDICTED:_kelch-like_protein_10_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.676
 

Sequence

CDS
ATGATGATAACGGTGCACTGGCAACAGCAGACGGCGGGTCGGGAAACCGGTCGGTGCATGTCGGTGGCAGCGATGCAGGCGCTCCATCGACTGCGCGAGTGTCGTCTGCTATGCGACGCTATTGTGCGCGCTGACGATGGCGCTTCCTTCCCCGTGCACCGTGCTATACTCTCAGCCTGCAGCCCATACTTCCTGGCACTGTTCACAACAACTCTTCATTCTCGGGAGCAAAGCGACGTATTGATATCCGGAGTGCGTTCTGAGATATTACTGCTGTTGATTGAGTACGCCTACCTCCGCCGTATCGATGTCACAGATACCAATGTACATGAGCTCCTAATGACAGCCGATTATCTCGCTTTCCTTGGAGTGCTTCAGCTTTGTTGCGATCATCTCAGAAGTTCATTGAACCCAAAAAACTGTCTTGGAATTATGACTTTTGCAAGGCGTGTTTTCTGTTACAAACTCGAAGCGGATGCACGAAGGTATTTATTGCGTTACTTTGTAACAGTCGCAACACAGAGCGACGAATTCCTTCACTTGCCACTGGACGAACTTAATTCTATTATATTGGAGGACGAATTAAACGTTAAAAGTGAGGAAGCAGTTTGGGAATCCGTTTTGCGTTGGGTCAATTACGATCCAGACGGTCGATGGCAGCACACGGTAAAATTAATGGGCAGCATTCGACTGGGATTGCTCGACACGCAATTCTTCCTAGAGAATGTTAAAGATCATCCATACGTTGCCGGGAATGAAGGATCTAGGCCAGTTATAATAGAGACGCTGAAGTTCTTATACGATTTGGAAATGATTGCTCAGAGAGATGGAGAAGTTGCCACACCAGAAATAGCCCGACCAAGAGTGCCGCATGAGGTCTTGTTTGCCATTGGAGGATGGAGTGGTGGGTCTCCGACTGCTTTCATCGAAACCTACGATACAAGAGCTGATCGCTGGATCAAAGTCGAAGAAGTGGATCCGGCTGGTCCACGAGCCTACCACGGAACAGCAGTCTTAGGATCTTGCATATACGTTATCGGCGGTTTTGACGGCATGGACTACTTCAACTCGTGTCGCTGTTTTGATGCCGTCACAAAAATATGGCGCGAGGTTGCACCCATGAACGCAAGGCGTTGTTACGTGTCTGTTGCTGTCGTTGGTGAGACAATCTATGCAATGGGCGGTTACGATGGCCACCACAGACAGAACACGGCCGAAAAGTTTAATCATCGAACGAATCAATGGTCGCTGGTGGCACCGATGAATGCACAACGTTCCGATGCAAGCGCCGCCTCACTTGACAACAAGATATACATAACCGGTGGCTTCAATGGTCAGGAATGCATGAACAGCGTCGAAATGTACGATCCAGAAGCGAACCAATGGACGAATTTGACCCCGATGAGGTCGCGCCGCTCCGGCGTGTCCTGCATCGCTTACCACAACAAGGTCTACGTCATTGGAGGCTTCAACGGTATCTCGAGGATGTGCAGCGGCGAGGTGTACGACCCGACGACCAACACGTGGGCGCCCGTGCCGGACATGTACAATCCCCGCAGCAACTTTGCCATCGAGGTCATTGACGACATGATCTTTGCGATCGGCGGCTTCAATGGAGTCACCACTATATACCACGTCGAGTGCTACGACGAGAAGACGAACGAGTGGTGA
Protein
MMITVHWQQQTAGRETGRCMSVAAMQALHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGVRSEILLLLIEYAYLRRIDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLGIMTFARRVFCYKLEADARRYLLRYFVTVATQSDEFLHLPLDELNSIILEDELNVKSEEAVWESVLRWVNYDPDGRWQHTVKLMGSIRLGLLDTQFFLENVKDHPYVAGNEGSRPVIIETLKFLYDLEMIAQRDGEVATPEIARPRVPHEVLFAIGGWSGGSPTAFIETYDTRADRWIKVEEVDPAGPRAYHGTAVLGSCIYVIGGFDGMDYFNSCRCFDAVTKIWREVAPMNARRCYVSVAVVGETIYAMGGYDGHHRQNTAEKFNHRTNQWSLVAPMNAQRSDASAASLDNKIYITGGFNGQECMNSVEMYDPEANQWTNLTPMRSRRSGVSCIAYHNKVYVIGGFNGISRMCSGEVYDPTTNTWAPVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTNEW

Summary

EMBL
BABH01037148    ODYU01004825    SOQ45108.1    NWSH01000173    PCG78761.1    RSAL01000139    + More
RVE46130.1    AGBW02010564    OWR48305.1    JTDY01001427    KOB73885.1    PCG78759.1    PCG78760.1    KZ288254    PBC30839.1    KQ414594    KOC70140.1    KQ980734    KYN13946.1    KQ982753    KYQ51196.1    KQ976885    KYN07355.1    KQ981523    KYN40249.1    GL443762    EFN61627.1    KQ976408    KYM91196.1    ADTU01007164    ADTU01007165    KK107323    EZA52628.1    GFTR01007560    JAW08866.1    KQ435093    KZC14620.1    ACPB03004813    DS235354    EEB15077.1    KQ971372    EFA10330.1    KQ759885    OAD62157.1    KB632133    ERL89019.1    GEZM01002346    JAV97312.1    APGK01018556    KB740081    ENN81608.1    GBHO01010073    GBRD01001242    JAG33531.1    JAG64579.1    GBHO01010075    JAG33529.1    GBRD01001241    JAG64580.1    KQ435730    KOX77560.1    GBYB01002312    JAG72079.1    GECZ01022092    JAS47677.1    GECZ01007843    JAS61926.1    GBYB01002313    JAG72080.1    GEBQ01022893    JAT17084.1    LJIJ01000077    ODN03344.1    QOIP01000002    RLU25302.1    UFQS01000048    UFQT01000048    SSW98573.1    SSX18959.1    KK853004    KDR12596.1    CCAG010000954    LNIX01000003    OXA57496.1    PYGN01000390    PSN47135.1    ABLF02030839    ABLF02030841    ABLF02043432    ABLF02058034    KB200701    ESP00682.1    GAKP01019616    JAC39336.1    KB201813    ESO94394.1    GAMC01016510    JAB90045.1    GAMC01016511    JAB90044.1    GDHF01003592    JAI48722.1    GBXI01010520    JAD03772.1    NEVH01017333    PNF24644.1    NEVH01024210    PNF17473.1    CH933807    EDW12054.1    NEVH01006580    PNF37608.1    GAKP01019615    JAC39337.1    GAMC01016509    JAB90046.1    CH940649    EDW63430.1    CH916372    EDV99007.1    JH818378    EKC42522.1    LJIG01009138    KRT83679.1    NEDP02002269    OWF51388.1    CH379061    EIM52230.1    CH963857    KRF98403.1    NEDP02003184    OWF49315.1    CH902628    KPU75324.1    KPU75325.1    BT014923    BT022090    CP007081    AAT47774.1    AAY33506.2    EAA46324.2    EAA46325.2    CH477424    EAT41190.1    OUUW01000010    SPP85553.1    RQTK01000005    RUS91794.1    KK852541    KDR21753.1    KRG03060.1    KRG03062.1    KRG03061.1    KRF81115.1    KRF81116.1    KRF81117.1    KRF81119.1    GFDL01004251    JAV30794.1    DS231865    EDS40395.1    CVRI01000058    CRL02759.1    GDHF01005729    JAI46585.1    NEDP02004067    OWF46852.1    KK852899    KDR14136.1    GEDC01028608    GEDC01016987    JAS08690.1    JAS20311.1    KPU75326.1    KK853081    KDR11680.1    EKC42523.1   
Pfam
PF07707   BACK        + More
PF01344   Kelch_1
PF00651   BTB
PF16653   Sacchrp_dh_C
PF03435   Sacchrp_dh_NADP
Interpro
IPR015915   Kelch-typ_b-propeller        + More
IPR000210   BTB/POZ_dom       
IPR006652   Kelch_1       
IPR011333   SKP1/BTB/POZ_sf       
IPR017096   BTB-kelch_protein       
IPR011705   BACK       
IPR005097   Sacchrp_dh_NADP       
IPR036291   NAD(P)-bd_dom_sf       
IPR032095   Sacchrp_dh_C       
SUPFAM
SSF54695   SSF54695        + More
SSF117281   SSF117281       
SSF51735   SSF51735       
Gene 3D
PDB
5YQ4     E-value=4.15474e-52,     Score=519

Ontologies

Topology

Length:
556
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.21486
Exp number, first 60 AAs:
0.31406
Total prob of N-in:
0.04024
outside
1  -  556
 
 

Population Genetic Test Statistics

Pi
17.714941
Theta
15.670676
Tajima's D
0.145728
CLR
0.445696
CSRT
0.416579171041448
Interpretation
Uncertain
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