SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07391  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010338
Annotation
PREDICTED:_alpha-aminoadipic_semialdehyde_synthase?_mitochondrial_[Papilio_polytes]
Location
Bomo_Chr12(+):11933835-11973358      View in EpiBrowser
Location in the cell
Cytoplasmic   Reliability : 2.165
 

Sequence

CDS
ATGCAGTCTTACATAAATGCTGGGGCGATAGTGCAGGAGGACATCAGCGAAGCCAGCGTTATATTTGGAGTGAAGCAAACTCCTATTGATCTACTTATACCTAACAAGACGTACTGTTTTTTCTCTCATACAATCAAGGCACAGGAAGCCAACATGCCAATGTTGGATGCTATGCTGGCAAAGAACATTCGTTTAATAGACTACGAGAAGTTGATGGACGACAAGGGGAATCGGGTAGTCGCCTTCGGGAAGTACGCAGGAGTTGCAGGAATGGTGAACATTCTGCACGGACTCGGTCTGAGGCTATTGGCTCTCGGACACCACACTCCCTTTATGCATATAGGTCCCGCTCACAACTACCGGAATTCTAGTATGGCCCGCCAAGCTATCCGGGACGCGGGATACGAAGTTGCCTTAGGAATGATGCCCAAATCCCTGGGACCGCTGACATTCGTATTTACGGGATCCGGAAACGTCTCGCAGGGTAGTCAAGAAATCTTTCAAGAACTCCCACACGAATACGTTCCGCCTGAGATGCTGAGGAAAGTCGCAGAGCACGGGAGTCCAAACAAGATATACGGTTGCGAGGTGCGCAGACGTCATCATCTGGTGCGGAAGAACGGCGGCGGTTACGACGCTGATGAATACGAAGAGCATCCAGAGAGATACATATCCACTTTCGCTCAGAAAATCGCACCGTACACATCCGTGCTGGTCAACTGCATCTATTGGGCAGTTGACAGTCCGAAACTACTCACGATACCTGATGCGAAGCACCTCATCATGCCGGCACATACCCCGTGGTTACCGAAGAGCATCGGAGCCCCGGCGTTACCACACAGAATGCTGGCAATCTGTGACATATCAGCAGACCCCGGAGGCTCCATCGAGTTCATGAATGAGTGCACTACAATCGACACGCCCTTCTGCTTGTATGACGCTGACAGAAACAAGGATACGAAGAGTTTCAAAGGTGCAGGAGTACTTGTGTGTTCCATCGATAACATGCCAACTCAACTGCCTCGTGAGTCGACCGATTTCTTCGGGGACCTACTCTATCCGTACGCAGAGGACATCATGAAGTCTGATGCTACCAAACCACTGGAGGAACATAAATTCTCGTCCGTTGTTCATGGGTCTATCATCACTAGCAATGGAAGATTGACTCCATCTTTTGAATACATTAATGAGCTACGCATGTCGAATACTCGTTCCCGTCACAAAGTGGAAGGTAACGACCAGCAGTCGCCAATAGTGATCCTCGGCAGCGGATTGGTGTCCGCTCCCGTTGTGGAATACCTGTCCCGGGATAAAAACATTGCTGTGACAGTCGCATCAGCAGTGAAAGAGGAAGCAGACGCTCTAGCAGAGAAGTACGGTGTCTCATCCGAATACTTCGAAGCTAATGACGAAGCAGCCCTTAAGGCCCTTACCTCTAAAGCCAGACTGGTAATTTCTCTTTTACCCTATGGCCTGCACGGGACTGTGGCTAAGGCCTGCCTCAATTCTGGAGCACATTTGGTTACCGCGTCATATGTTAGGCCCGAAGTACAGGAATTACACAAAAGCGCGAAAGAAGCGGGTCTGACGTTCCTCAATGAAGTAGGACTCGACCCCGGCATCGACCACTTGCTCGCGCTGGAGTGTATTCACAACATACAGAGCCACGGAGGAAGGATTGACTCGTTCGTCTCTTACTGTGGAGGTTTACCGGCACCGGAATTTAGTGACAACGCACTCCGTTACAAATTCTCATGGAATCCTCGTGGAGTTCTACTGAACACGATATCCAGTGCTAAATATCTGAGTAAAGGACAGATCGTAGAAGTGTTGAGCGGCGGTGAGCTGATGTCAGTGGCTCGAGAGCTGGACTTCCTCCCTGGATTCGCGTTCGAAGGGTTCCCCAATAGAGACAGCACGATCTACTCTACGTTATACGGTATAGAAGAGGCACACACAATGTTCAGGGGCACTATCCGATACAAAGGATTCGCTGAGACGATGAAAGCCTTACAGCTCTTCGGTTTGGTGGATCCAAACTCACATCCATCTCTACATCCAGACGGACCTAACATTACATGGCGTCAATTTGCCTGTGAACTTCTTGGTCTGCTGGACCAGTCGATATTCTATGACAACTTGAAGTCCCGGGCAGCAGAACAATTGGGGCCAGTCGGAGCTCAAGCCGTAGAATCCTTGGGACTGCTCAGTGATAGCGAAATCGTCAAATGCGGCACTCCGTTGGACACGATCAGTCATTACCTTAGTAAAAAGCTGCAGTTAGACAAGGACGAGACAGACTTCGTGGTTCTGCGACACGAGCTCGGAGTTACGTGGAGCGACGGTAAAAAGGAGAAACGAGAGGTCACCATGACGGTCAGGGGAGATCCTGCGTCTCATACAGCTATGGCCAGAACTGTAGGATTGCCGACGGCCATTGCCGCTAAGATGGTACTTGATGGTGGCAATCTGTGCATTTGGACAAAAAAATGTTATTGA
Protein
MQSYINAGAIVQEDISEASVIFGVKQTPIDLLIPNKTYCFFSHTIKAQEANMPMLDAMLAKNIRLIDYEKLMDDKGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSSMARQAIRDAGYEVALGMMPKSLGPLTFVFTGSGNVSQGSQEIFQELPHEYVPPEMLRKVAEHGSPNKIYGCEVRRRHHLVRKNGGGYDADEYEEHPERYISTFAQKIAPYTSVLVNCIYWAVDSPKLLTIPDAKHLIMPAHTPWLPKSIGAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSFKGAGVLVCSIDNMPTQLPRESTDFFGDLLYPYAEDIMKSDATKPLEEHKFSSVVHGSIITSNGRLTPSFEYINELRMSNTRSRHKVEGNDQQSPIVILGSGLVSAPVVEYLSRDKNIAVTVASAVKEEADALAEKYGVSSEYFEANDEAALKALTSKARLVISLLPYGLHGTVAKACLNSGAHLVTASYVRPEVQELHKSAKEAGLTFLNEVGLDPGIDHLLALECIHNIQSHGGRIDSFVSYCGGLPAPEFSDNALRYKFSWNPRGVLLNTISSAKYLSKGQIVEVLSGGELMSVARELDFLPGFAFEGFPNRDSTIYSTLYGIEEAHTMFRGTIRYKGFAETMKALQLFGLVDPNSHPSLHPDGPNITWRQFACELLGLLDQSIFYDNLKSRAAEQLGPVGAQAVESLGLLSDSEIVKCGTPLDTISHYLSKKLQLDKDETDFVVLRHELGVTWSDGKKEKREVTMTVRGDPASHTAMARTVGLPTAIAAKMVLDGGNLCIWTKKCY

Summary

Uniprot
A0A2A4K517   A0A194PUW8   A0A3S2LGE3   A0A194R3A5   A0A212F3J0   W5J135   + More
A0A2J7PFD0   A0A2M4ADN1   A0A1Q3EWG7   A0A182F3C9   A0A2M4ADV8   A0A182MZ88   K7IY91   A0A2M4BCT7   A0A2M4BCY1   B0W052   A0A1S4GZJ7   A0A2M3ZHE3   A0A182V7M8   A0A182KN61   A0A182X5W9   A0A182IBK2   A0A182UB27   Q7Q8H4   A0A182K201   A0A182P494   A0A0M4EQC8   A0A084VWA4   A0A182GMA3   A0A067R3X4   A0A182G4K6   A0A182YN64   Q16FJ9   A0A1W4VW09   A0A1W4W8H4   A0A182J8K2   A0A0L0CHU3   N6T5M0   A0A182M551   U4UGY2   A0A182WFG6   A0A034VP84   A0A182QQG5   A0A0K8VR10   Q6NP53   A0A182S9I3   Q9VLX0   A0A0J9TI62   B4Q5T6   T1PB97   A0A1I8NIA5   B4HYA5   A0A0A1WRE6   A0A182RK59   A0A3B0K7Y5   Q29N04   B4G8F0   A0A232ETN0   A0A088A9B9   W8C6X0   B4MWK8   A0A1L8E2J9   B3N6N9   A0A1L8E2M1   A0A154PN20   B4JA33   B3MV19   B4NZG7   A0A2A3EH56   A0A1L8EG15   B4LSS5   A0A1B0BAF3   A0A1B0GAH4   A0A1A9XEL1   A0A1B0A4H4   A0A1A9V851   D7EHU4   A0A1I8Q0M1   A0A0L7QP68   B4KGK4   E2AAL3   A0A1B0DM19   A0A0Q9WHQ2   F4X232   A0A151X527   A0A158NAV3   A0A151I0P3   A0A026WG82   A0A3L8DGN0   A0A151J0T3   A0A1B6IKQ4   A0A1J1IP72   A0A2P8YR72   A0A195EWE1   A0A0N7Z8Z0   T1HVD2   A0A224XB08   A0A1B6KSG6   A0A1B6GNF7   A0A0A9Y0C3  
Pubmed
26354079    22118469    20920257    23761445    20075255    12364791    + More
20966253    24438588    26483478    24845553    25244985    17510324    26108605    23537049    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17994087    25315136    25830018    15632085    28648823    24495485    17550304    18362917    19820115    20798317    18057021    21719571    21347285    24508170    30249741    29403074    27129103    25401762    26823975   
EMBL
NWSH01000173    PCG78762.1    KQ459592    KPI96783.1    RSAL01000139    RVE46129.1    + More
KQ460845    KPJ12009.1    AGBW02010564    OWR48306.1    ADMH02002200    ETN57852.1    NEVH01025673    PNF15027.1    GGFK01005575    MBW38896.1    GFDL01015386    JAV19659.1    GGFK01005653    MBW38974.1    GGFJ01001715    MBW50856.1    GGFJ01001690    MBW50831.1    DS231816    EDS37624.1    AAAB01008944    GGFM01007188    MBW27939.1    APCN01000708    EAA10176.3    CP012523    ALC38945.1    ATLV01017545    KE525174    KFB42248.1    JXUM01074209    JXUM01074210    KQ562817    KXJ75066.1    KK852715    KDR17867.1    JXUM01007241    KQ560235    KXJ83691.1    CH478423    EAT33010.1    JRES01000359    KNC31958.1    APGK01043500    APGK01043501    KB741014    ENN75494.1    AXCM01009067    AXCM01009068    KB632293    ERL91618.1    GAKP01014694    GAKP01014693    JAC44259.1    AXCN02002069    GDHF01010997    JAI41317.1    BT011078    AAR82744.2    AE014134    AAF52559.2    AHN54234.1    CM002910    KMY88854.1    KMY88855.1    CM000361    EDX04132.1    KA645415    AFP60044.1    CH480818    EDW52035.1    GBXI01013202    JAD01090.1    OUUW01000004    SPP79638.1    CH379060    EAL33539.1    CH479180    EDW28630.1    NNAY01002259    OXU21702.1    GAMC01008296    JAB98259.1    CH963857    EDW76149.1    GFDF01001124    JAV12960.1    CH954177    EDV59255.2    GFDF01001123    JAV12961.1    KQ434984    KZC13127.1    CH916368    EDW03707.1    CH902624    EDV33084.1    CM000157    EDW87716.1    KZ288259    PBC30496.1    GFDG01001215    JAV17584.1    CH940649    EDW63814.1    JXJN01010943    CCAG010003219    DS497665    EFA12161.1    KQ414823    KOC60428.1    CH933807    EDW13204.1    GL438129    EFN69520.1    AJVK01006826    KRF81296.1    KRF81297.1    GL888565    EGI59448.1    KQ982519    KYQ55516.1    ADTU01010300    KQ976600    KYM79453.1    KK107231    EZA54953.1    QOIP01000009    RLU19079.1    KQ980629    KYN15023.1    GECU01020213    JAS87493.1    CVRI01000057    CRL02037.1    PYGN01000418    PSN46751.1    KQ981954    KYN32204.1    GDKW01002011    JAI54584.1    ACPB03010888    GFTR01008302    JAW08124.1    GEBQ01025585    JAT14392.1    GECZ01005791    JAS63978.1    GBHO01017082    GBRD01009813    GDHC01013336    JAG26522.1    JAG56011.1    JAQ05293.1   
Proteomes
UP000218220    UP000053268    UP000283053    UP000053240    UP000007151    UP000000673    + More
UP000235965    UP000069272    UP000075884    UP000002358    UP000002320    UP000075903    UP000075882    UP000076407    UP000075840    UP000075902    UP000007062    UP000075881    UP000075885    UP000092553    UP000030765    UP000069940    UP000249989    UP000027135    UP000076408    UP000008820    UP000192221    UP000075880    UP000037069    UP000019118    UP000075883    UP000030742    UP000075920    UP000075886    UP000075901    UP000000803    UP000000304    UP000095301    UP000001292    UP000075900    UP000268350    UP000001819    UP000008744    UP000215335    UP000005203    UP000007798    UP000008711    UP000076502    UP000001070    UP000007801    UP000002282    UP000242457    UP000008792    UP000092460    UP000092444    UP000092443    UP000092445    UP000078200    UP000007266    UP000095300    UP000053825    UP000009192    UP000000311    UP000092462    UP000007755    UP000075809    UP000005205    UP000078540    UP000053097    UP000279307    UP000078492    UP000183832    UP000245037    UP000078541    UP000015103   
PRIDE
Q6NP53    Q9VLX0   
Pfam
PF01262   AlaDh_PNT_C        + More
PF05222   AlaDh_PNT_N
PF03435   Sacchrp_dh_NADP
PF16653   Sacchrp_dh_C
PF05793   TFIIF_alpha
Interpro
IPR007698   AlaDH/PNT_NAD(H)-bd        + More
IPR032095   Sacchrp_dh_C       
IPR007886   AlaDH/PNT_N       
IPR036291   NAD(P)-bd_dom_sf       
IPR005097   Sacchrp_dh_NADP       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR011039   TFIIF_interaction       
IPR008851   TFIIF-alpha       
SUPFAM
SSF51735   SSF51735        + More
SSF46785   SSF46785       
SSF50916   SSF50916       
Gene 3D
1.10.10.10    
ProteinModelPortal
A0A2A4K517   A0A194PUW8   A0A3S2LGE3   A0A194R3A5   A0A212F3J0   W5J135   + More
A0A2J7PFD0   A0A2M4ADN1   A0A1Q3EWG7   A0A182F3C9   A0A2M4ADV8   A0A182MZ88   K7IY91   A0A2M4BCT7   A0A2M4BCY1   B0W052   A0A1S4GZJ7   A0A2M3ZHE3   A0A182V7M8   A0A182KN61   A0A182X5W9   A0A182IBK2   A0A182UB27   Q7Q8H4   A0A182K201   A0A182P494   A0A0M4EQC8   A0A084VWA4   A0A182GMA3   A0A067R3X4   A0A182G4K6   A0A182YN64   Q16FJ9   A0A1W4VW09   A0A1W4W8H4   A0A182J8K2   A0A0L0CHU3   N6T5M0   A0A182M551   U4UGY2   A0A182WFG6   A0A034VP84   A0A182QQG5   A0A0K8VR10   Q6NP53   A0A182S9I3   Q9VLX0   A0A0J9TI62   B4Q5T6   T1PB97   A0A1I8NIA5   B4HYA5   A0A0A1WRE6   A0A182RK59   A0A3B0K7Y5   Q29N04   B4G8F0   A0A232ETN0   A0A088A9B9   W8C6X0   B4MWK8   A0A1L8E2J9   B3N6N9   A0A1L8E2M1   A0A154PN20   B4JA33   B3MV19   B4NZG7   A0A2A3EH56   A0A1L8EG15   B4LSS5   A0A1B0BAF3   A0A1B0GAH4   A0A1A9XEL1   A0A1B0A4H4   A0A1A9V851   D7EHU4   A0A1I8Q0M1   A0A0L7QP68   B4KGK4   E2AAL3   A0A1B0DM19   A0A0Q9WHQ2   F4X232   A0A151X527   A0A158NAV3   A0A151I0P3   A0A026WG82   A0A3L8DGN0   A0A151J0T3   A0A1B6IKQ4   A0A1J1IP72   A0A2P8YR72   A0A195EWE1   A0A0N7Z8Z0   T1HVD2   A0A224XB08   A0A1B6KSG6   A0A1B6GNF7   A0A0A9Y0C3  
PDB
5L78     E-value=2.83157e-104,     Score=970

Ontologies

KEGG
101743783    K14157 alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9] | (RefSeq) alpha-aminoadipic sem
PATHWAY
00310    Lysine degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
GO
GO:0016491   GO:0004753   GO:0005737   GO:0034969   GO:0031060   GO:0006367   GO:0032968   GO:0005634   GO:0003677   GO:0016020   GO:0016780   GO:0000398   GO:0003723   GO:0005215   GO:0043022   GO:0005488   GO:0003707   GO:0051537   GO:0055114  

Topology

Length:
832
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
10.88818
Exp number, first 60 AAs:
0.00469
Total prob of N-in:
0.49044
outside
1  -  832
 
 

Population Genetic Test Statistics

Pi
16.848746
Theta
16.277583
Tajima's D
-1.297323
CLR
15.222035
CSRT
0.0854457277136143
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 GVLLNTISSAK 100.00 1e-13
28556443 LLTIPDAK 96.15 2e-09
28556443 GVVLPFAPVVY 96.15 2e-09
28556443 FSSVVHGSIITSNGR 100.00 9e-07
28556443 FSSVVHGSIITSNGR 100.00 9e-07
28556443 DAGYEVALGMMPK 100.00 1e-06
28556443 DKNIAVTVASAVK 100.00 1e-06
26280517 DKFGGIHFFNPVPVMR 95.45 1e-06
28556443 DSTIYSTLYGIEEAHTMFR 100.00 6e-06
28556443 DSTIYSTLYGIEEAHTMFR 100.00 6e-06
28556443 LVISLLPYGLHGTVAK 100.00 2e-05
28556443 YAGVAGMVNILHGLGLR 100.00 1e-04
28556443 GQIVEVLSGGELMSVAR 100.00 1e-04
28556443 GAGVLVCSIDNMPTQLPR 100.00 1e-04
28556443 GAGVLVCSIDNMPTQLPR 100.00 1e-04
28556443 LTPSFEYINELR 100.00 4e-04
28556443 LQLDKDETDFVVLR 100.00 4e-04
28556443 HLIMPAHTPWLPK 100.00 6e-04
28556443 GVVLPFAPVVYK 100.00 6e-04
28556443 GVVLPFAPVVYK 100.00 6e-04
28556443 FSSVVHGSIITSNGR 100.00 0.002
28556443 FSSVVHGSIITSNGR 100.00 0.002
28556443 ELDFLPGFAFEGFPNR 100.00 0.002
28556443 ELDFLPGFAFEGFPNR 100.00 0.002
28556443 AQEANMPMLDAMLAK 100.00 0.002
28556443 TVGLPTAIAAK 100.00 0.002
28556443 AQEANMPMLDAMLAK 100.00 0.002
28556443 AAEQLGPVGAQAVESLGLLSDSEIVQ 100.00 0.002
28556443 MTSNVESHLK 100.00 0.002
28556443 HLIMPAHTPWLPK 100.00 0.005
28556443 HLIMPAHTPWLPK 100.00 0.005
28556443 DAGYEVALGMMPK 100.00 0.030
28556443 CGTPLDTISHYLSK 100.00 0.030
28556443 AQEANMPMLDAMLAK 100.00 0.030
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