SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07386
Pre Gene Modal
BGIBMGA010335
Annotation
hypothetical_protein_KGM_15734_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.841
 

Sequence

CDS
ATGCAATGTCGGTTTTCATTGGAGCCCCTCGCCGGAGAACCCCTCACCTACTACTGGGTGCGGAGCACTGCCAGCGGACACGAAAACGTTGCGATAGGCAATATTCCCCTCGAAACGAACTACCAGATAACATACGCGCCGACGGAGGGTCGCTTCGACTTATTGGTATCGAATGTATCGTACGAGCGAGATAATGGGCGCTTCGAGTGCAGAGTGAAGGCGGGCGGGTCCGGCCGGACTCTGCATTCTCAGGGACATGCCCTCACTGTACTCATACAGCCCCGACCTCCTACCTTGACGCCGGGCACGCACACGCAGTCACAAGAGGGCCGAGAACTCAATCTTGCCTGTTCCAGCTCAGGAGGATCTCCCGAACCCACTATCAAGTGGTACCGAGACGGTTCAATCTATCCGATGGAGGCGATGATGACGCATGCGAAGACCAGAGCCGAGGCAACAGTTGCAACCCTCAGCCTCAACACTACAAAGGAAGATGATGGCGCTATTTTCCGCTGCGTGATCTGGAATCGTGCTATGCCCGAGGGAGAACAGCTGGATGCCAGCGTCGAGCTCAGTGTCAATTATTTCCCACGGATCGAAGTAGGACCCGAAAACCCTTTGCGAATCGAAATTGATGGCACGGCCACGATGGAATGTAAAGTCGATGCCAAACCGAAAGTCAGCTCTGTACGATGGACCAGAAACGGAAAATATATATCGAACTCCTTCACTCACACGATCCAGGGAGTCACAGTACAAGACGCGGGCAAGTACGCTTGTACCGCGGACAATGGTCTGGGCCGACCAGGGGAGAAGGAAATGTATCTAGACGTATTATTCCCGCCGAGTGTCAAAGTGGAATCTAAAACATACGAAGCCGAAGAAGGCGGTAACGTGCACATACGATGCGATGTCTCAGCCAATCCTGAACCCATCTCCGTGGAATGGATAATGGAGGGAAAACCCGATTTCCACCAAAAAGGCAACAATCTAACATTGACTGGTGTTAACGCGAACATGGCTGGGACTTATTTGTGTCGGGCGGTTAACGTTATATCGTCAACGAACGGAAAGCGTGCTGAACGGTCAAACAGCGCTTCGGTCGCGGTTCTTGTACGGCATAAACCCGGGCGCGCTTACATCAGTCCGGACAAGCCCATTGCACAGGAGGGGACCGGGGTTACGTTGACGTGCAGCGCGAACCCTCCCGGCTGGCCCGCCCCGCAGTACAGATGGTTCCGCGACATAGAAAATTCTGACACGAAGCCCGCTGTTCTCGCCACCGGCAACAAGTACACCATTCCGAGCGCACATCTGGGCAGCGAAGGCGTTTATCACTGTCAGGCCACTAATGAACTCGGCCACGGCGAACTAGCTTCGGTTACTCTAGAAGTCCATCAGCCTCCGCGCTTCCAAATGAAACTTCAACCTCACACGACGAAACGGGCCGGCGAACAGGACTACGCGGTGAGCTGCAGCGTGCTGGGCAAACCACGGCCCACCGTCAGATGGTACAAAGATAATTCGGAGATCAAGCCTGATGCTAATCTGTATGAAGTCAAGAGTGATATCGCCGAAACCAGCAACGAAGTGTACAACGTACAGAGCACGCTAAAGTTCAGGGGGAAAGCAAGACCGAACACTAATGATTTATTACCAGAAGACAGGGGTATCTACTCTTGTAACTTCGAAAATGAAGTAAAAAAAGTCGAATCCACAATGCATCTTCGAATAGAACACGAACCGATATTGATTCGACAACATAAAAAAGTAGCTTACGACATCGACGAAACAGCCGAAATAGTGTGCCGAGTGCAGGCGTACCCCAAACCGGAGTTCCAATGGTTCTACGGCACGAACACCGCGCCGCTTCAGATGTCCTCCGACGGACACTACGAGATCAACACGACGACAGACAGCAACGACTCGTACTTCAGCATGCTACGAATAAAGAAAGTGAAGCCTCAGGACTACGGCGACTACTACTGCAAAGTGAAGAACTCGCTCGGCCATATACGACCTCAGATACGACTGCAGCCGAAGGGCGCTCCGGAGTCGCCGTCCGCGCTCGAGAGCCAGAAGGTCGGACCGACGTATGTGACGCTCAAATGGGAGGCAGGCTTCGACGGAGGACTGTCGAATACGAAGTACTTCGTGCTGTACCGGCGGGCGTCGCTGCGAGGGGTGGGGGGCGCCGGCAGCGAGCACTGCACCGTGGAGCGTTCCACGGACCGCGACTGGATGGAGTACGACTGCGGACGCGCCAACCCTTGCAACGTGACGCGCCTCGACCAACACAACGCTTACTCGTTCAAGGTGAAGGCGGTGAACACGAAAGGTCACAGTGAGTATTCGAATGAGCTCACTGTGACGACTAAAGTGGATAAGATCGCCCCTCCGGAACAAGTGACGTACGATCCGAGCTCGCGGATGATCGTGTTCACGGTGGTACCGACCTGCCTCACTGTCGTAGGAGTCGTGGAAGGACTGGGCAACATGGGAGGAGCTACTGGCTGGCAGGTGGTTGAGACAATACCGCTGCGGCTATCAGGGTCAACAGCGATCGTGCAAGAGTCCACCTTAGAATTGCCCAGCAAGTCCAGTCGAGTTGCAGGCAGACACATGTCGGACCCGCCTCTCGACGAACTCAATCCCAGGATCAGACTAAAACTCTGTCTGCAGGTCAACCAAGAGGTGTGCAGTGAATACGCCGAAGCTGAAATCGGACAGTCGTACGTGAAAGAAGCGTCTACCTTGAAAACGGCAACGATGCTCGCCATTTTGTTTTCCGCGATCATGTTCGTCGTGGTCGCAGCCTTACTGTTCATATTCTGCCACTGCAAACGAAAGGAGAGCAAGAAGGACAGGTCTAAAGATTACGAAATGGACTCCATGAGGCCGGCGATGGTCACCCCTCAGAACCAAGCGCCGCCCCCTTACTACCCAGGAACCGGTATGGAAAACAAGGCTTTGGAACATTCCATGGATCTTGGCCTTATGGATGATTCCAAGAACAACATGTACGCCACTCAGGGAGGCTACCTCTGCAACGTTCCAGTGCAAATCAAAACTCATCACGGACAAGCCATTCCTAATTCTGACTGGAACATGGGCTTCGTCGAGAACAGCTATACGAATAGCAACAACGGGGGTAGCGTGAACTCGCAGGACTCTCTGTGGCAGATGAAAATGGCCGCCGGTAACAACGGGGGAGCTATGCCCGCGCACCAGCTCCTAGACCGACAGAGCAACTACGAGTACGACGGGATGACGCACGGCGGGTACCGCGCCGTGGACGACTACGCGCCGTACTCGCACCTGCCGCCCCCCGCGCCCGCCGACTACAGCCTGCACCCCCCCTCGCGCCAAGACTACTGCTCCGATCCCTACGCCTCCGTGCACAAGCCCAAGAAGCCCAGGGCCGACCAACACATCGAGTCACCGTACCACGAGGTGAGCGGGTTGCCGGAGTACTGCGGCGCGGGTCCGACGGAGGAGGGGGGCGCGGAGGACAAGGCGGCGCACATGTCGCTGTGCTGCGACGAGTCCCTCGAGTCCGGCTACTCCACGCCCAACTCCCGCGCGCGACGCGTCATCAGGGAGATCATCGTCTGA
Protein
MQCRFSLEPLAGEPLTYYWVRSTASGHENVAIGNIPLETNYQITYAPTEGRFDLLVSNVSYERDNGRFECRVKAGGSGRTLHSQGHALTVLIQPRPPTLTPGTHTQSQEGRELNLACSSSGGSPEPTIKWYRDGSIYPMEAMMTHAKTRAEATVATLSLNTTKEDDGAIFRCVIWNRAMPEGEQLDASVELSVNYFPRIEVGPENPLRIEIDGTATMECKVDAKPKVSSVRWTRNGKYISNSFTHTIQGVTVQDAGKYACTADNGLGRPGEKEMYLDVLFPPSVKVESKTYEAEEGGNVHIRCDVSANPEPISVEWIMEGKPDFHQKGNNLTLTGVNANMAGTYLCRAVNVISSTNGKRAERSNSASVAVLVRHKPGRAYISPDKPIAQEGTGVTLTCSANPPGWPAPQYRWFRDIENSDTKPAVLATGNKYTIPSAHLGSEGVYHCQATNELGHGELASVTLEVHQPPRFQMKLQPHTTKRAGEQDYAVSCSVLGKPRPTVRWYKDNSEIKPDANLYEVKSDIAETSNEVYNVQSTLKFRGKARPNTNDLLPEDRGIYSCNFENEVKKVESTMHLRIEHEPILIRQHKKVAYDIDETAEIVCRVQAYPKPEFQWFYGTNTAPLQMSSDGHYEINTTTDSNDSYFSMLRIKKVKPQDYGDYYCKVKNSLGHIRPQIRLQPKGAPESPSALESQKVGPTYVTLKWEAGFDGGLSNTKYFVLYRRASLRGVGGAGSEHCTVERSTDRDWMEYDCGRANPCNVTRLDQHNAYSFKVKAVNTKGHSEYSNELTVTTKVDKIAPPEQVTYDPSSRMIVFTVVPTCLTVVGVVEGLGNMGGATGWQVVETIPLRLSGSTAIVQESTLELPSKSSRVAGRHMSDPPLDELNPRIRLKLCLQVNQEVCSEYAEAEIGQSYVKEASTLKTATMLAILFSAIMFVVVAALLFIFCHCKRKESKKDRSKDYEMDSMRPAMVTPQNQAPPPYYPGTGMENKALEHSMDLGLMDDSKNNMYATQGGYLCNVPVQIKTHHGQAIPNSDWNMGFVENSYTNSNNGGSVNSQDSLWQMKMAAGNNGGAMPAHQLLDRQSNYEYDGMTHGGYRAVDDYAPYSHLPPPAPADYSLHPPSRQDYCSDPYASVHKPKKPRADQHIESPYHEVSGLPEYCGAGPTEEGGAEDKAAHMSLCCDESLESGYSTPNSRARRVIREIIV

Summary

EMBL
BABH01037128    BABH01037129    BABH01037130    NWSH01000453    PCG76314.1    RSAL01000139    + More
RVE46153.1    AGBW02010564    OWR48294.1    KQ460845    KPJ12016.1    KQ971371    EFA10080.2    GEZM01041357    JAV80482.1    JTDY01003002    KOB70332.1    GDIQ01003270    JAN91467.1    JRES01001109    KNC25480.1    CCAG010009269    CCAG010009270    CCAG010009271    CCAG010009272    CCAG010009273    CCAG010009274    CCAG010009275    GANO01004914    JAB54957.1    KA648713    AFP63342.1    CH963852    EDW75529.2    ACPB03005038    ACPB03005039    CH940649    EDW64065.2    CP012523    ALC38078.1    CH933807    EDW11203.2    AF275903    AAG60004.1    CM002910    KMY88015.1    CH480820    EDW54203.1    AE014134    AAF51045.2    AGB92549.1    CH954177    EDV57698.1    CM000157    EDW87606.1    GBHO01025162    GDHC01018105    JAG18442.1    JAQ00524.1    CM000361    EDX03685.1    GBXI01016351    GBXI01003232    JAC97940.1    JAD11060.1    GAMC01017488    JAB89067.1    GDHF01012629    GDHF01009606    GDHF01009470    JAI39685.1    JAI42708.1    JAI42844.1    CH477293    EAT44487.1    AAAB01008980    APCN01005222    GGFJ01000792    MBW49933.1    GGFJ01000763    MBW49904.1    GGFJ01000793    MBW49934.1    GGFJ01000762    MBW49903.1    GGFM01000947    MBW21698.1    GGFL01004586    MBW68764.1    GGFL01004601    MBW68779.1    GGFL01004587    MBW68765.1    EAA13791.4    ATLV01015109    ATLV01015110    ATLV01015111    KE525002    KFB40075.1    GGFK01002222    MBW35543.1    GGFK01002183    MBW35504.1    KMY88014.1    AGB92550.1    DS235110    EEB12066.1    GAMC01017486    JAB89069.1    GECZ01013377    GECZ01000051    JAS56392.1    JAS69718.1    APCN01005220    ABLF02038916    GECL01001475    JAP04649.1    GGFK01002302    MBW35623.1    KK853047    KDR12091.1    CVRI01000038    CRK94297.1    GGFK01002275    MBW35596.1    CH479180    EDW28643.1    CH379060    KRT03932.1    EAL33549.3    KB632161    ERL89237.1    OUUW01000004    SPP78963.1    CH902624    EDV33466.2    AJWK01015090    AJWK01015091    AJWK01015092    CH916368    EDW03961.1    PYGN01000207    PSN51210.1    GECU01030682    JAS77024.1    GECU01004018    JAT03689.1    AY051656    AAK93080.1    QOIP01000003    RLU24521.1    KK107013    EZA62886.1    KQ435809    KOX72954.1    DS232099    EDS34748.1    KQ414596    KOC70077.1    GAMC01006489    JAC00067.1    AXCM01000505    UFQS01004830    UFQT01004830    SSX16596.1    SSX35798.1    KQ759870    OAD62438.1    AXCN02001855    ADTU01003979    ADTU01003980    ADTU01003981    ADTU01003982    GL888434    EGI60961.1    KQ978848    KYN27965.1    KQ434875    KZC09790.1   
Pfam
PF13895   Ig_2        + More
PF08205   C2-set_2
PF07679   I-set
PF00041   fn3
PF00047   ig
PF07686   V-set
Interpro
IPR003961   FN3_dom        + More
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013162   CD80_C2-set       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR036116   FN3_sf       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
SUPFAM
SSF49265   SSF49265        + More
SSF48726   SSF48726       
Gene 3D
PDB
3B43     E-value=1.01553e-20,     Score=251

Ontologies

Topology

Length:
1204
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.24188
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00008
outside
1  -  921
TMhelix
922  -  944
inside
945  -  1204
 
 

Population Genetic Test Statistics

Pi
21.41455
Theta
19.810759
Tajima's D
0.189834
CLR
0.626427
CSRT
0.432728363581821
Interpretation
Uncertain
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