Gene

KWMTBOMO07382

Pre Gene Modal

BGIBMGA010332

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_multidrug_resistance-associated_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr12(-):11596134-11614119      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.735

CDS

ATGACCATATACTTCCGGTTGCCGCAAACATTGGCTTTCCAACACATCATGAAAATATTGACGTTTACGTTGTCAGCAAGCTTAGTATGGCTTAACAAAAAACATGGAATGCGAGCTTCCGGCGTACTGTTTTTCTTCTGGTTACTGTTAGCTGTCATCGAAGTACCCAGGCTGTGGTGCAAAGCATTGGAATTGAAAATGAACTTCGTAAACGGAATACAATACGGATTTATTAGTCTTGCTATCCATTACGGACTGATAGTATTATTGTTAATATTGAATTGTTTCGCTGACGCAGCGCCACGTGATTCCGTGTACACGGATTCTCAGAACCAATGTCCCGAAAGATCTGCTGGTTTTCTAAGTCGTCTAACCTTCAGTTGGTTCGATTCTTTAGTACTAAAAGGATATCGTAAGGAATTTGAAGAAGGCGATGTGTGGGATTTGAATTATCAAGAATCTTCTTCAGAAGTCGTACCAAGATTTAAGAAATACTGGGAACAACCGGCAAATAGACGTAACTCATCAACAAAACACATAAAAGCAAAATTTCGAAGAAGATCAACTGATAGAACCATGAAAACTAATACTAAAAATCGAACTGTGTCAATATTACCAGCTCTTTGCTTTGCCTTCGGAGGACAGTTCATGTTTGGGACATTCCTGAAACTGCTGAGTGATATTTCCATTTTTTTATCACCACAACTGCTCAAGCTTCTTATAGGGTTTATAAGCAGCGATGAGCCAACATGGAGGGGCTACTTATATTCTTTCCTGTTCTTTGGTTGTGCCGCTCTTGAAACAACGCTGTTGAGTCATTACACTTTGAAAATGAACATTGTCGGAATGAGGATAAGAACAGCATTAACGAACGCTATTTACCAAATGGCTCTTCGCATGAACAATACGACGCGGAAGCAGTCGACAGTTGGTGAAATTATTAATCTGATGTCCGTGGATGCCCAAAGATTCGTCAGTTTGACAAGCACATTAAACATGATTTGGTCTGCGCCTTTTCAGATTGTGCTTGCTATTTATTTTTTGTGGGGCGTACTAGGTCCTTCTGTTCTCGCCGGATTGGCGGTTATGATTCTTTTAATTCCAATGAACGGTTTCATTGCTCGTATGGAAGAGAAACTGGAAATCAGATTAATGAAATTCAAAGATAACAGAATTAAAATCATGAATGAGGTGTTGAACGGAATTAAGGTCCTAAAAATGTATGCTTGGGAATTAAGTTTTCAAGGACAGATTGACCAAGTGAGAAATAAAGAACTTAATATACTGAAGAAAGTGATTTACTTAGATTCCCTGACGTCATTAACGTGGTCTGCGACACCATTTCTGGTTTCACTCACGTCTTTTGGGTGTTTTATTTTAGTAAATGATTCGGAGAGTTTGGATTCAAAGAAATTATTTGTGGCCTTATCTCTATTCAACATATTACGTTATCCATTAATGATGCTGCCAAACACAATATCAAATATCGTTCAAACTTCCGTTAGCATAAAACGTTTAAATAAATTTTTGAATTCAACGGTTTTAGATTTAGAATCAATCGAACATGACCCTCAATATTCCTATCCGATAACTGTGGAAAACGGACACTTCTCGTGGGAAGGTCAAGATTCTAGTACGGTGTTGAGAAATATAAATTTGCGTGTGCCCCGAGGTTCTTTGGTGGCAATAGTCGGTGCTGTGGGCGCCGGGAAGAGCTCGTTACTGTCCGCACTTTTGGGCGAGATGACTAAGGTGTCGGGACGTGTCAACGTTCACGGTACAATAGCATACGTGTCACAAGAGCCATGGATACAGAATGCCACATTGAAAGATAACATTCTCTTCGGGAAGCCGTTTAATAAATACAAATATAAGAATGTACTAAACGCCTGTACTCTTGTGCAAGACTTGGAAATATTTCCCGGAGGAGATCTAACTGAGATAGGTGAAAAAGGTATAAACTTATCGGGCGGTCAGAAGCAGCGCGTGTCGCTGGCGCGCGCCGTGTACCACGAGGCGGACAACTACCTGCTGGACGACCCGCTCAGCGCCGTGGACTCGCACGTCGGCAAGCACATCTTCGACAAGGTCATCGGGCCCGCCGGCCTGCTCAAGGACAGGACGCGCGTCTGGGTCACGCACAACGTGTCCTACCTCGCGCAGACCGACCTGGTCGTCGTGCTGCGCGACGGACAGGTCTCCGAGGCCGGCTCCTACCAGCACCTGCTCGAGAAGAAGGGCGCCTTTGCTGACTTCCTGCTTCATCATCTAAGCGATGCAGAACGGTCATCAGTCGAATCTGTCAGAAAACAAGACCACGAATACAGATGCTCAAGGACAGAATCCCACCAGAATTTACAAAGAATTCGTTTACATTCCGAGAGCAACTCAGAAGCAGAGGACCGATCAGGAAAACTAGCTATCAGCTTTAAAAGAAGTATCGAAGAAATTATTTTAAATAAATCCGCCGAGCACGTTAGTTATACTGAAAAAGAGAAATCTGAAAGGGGCAGTGTTTCGTGGATGGTTTACAAGCACTACTTGAAAAACATCGGCGTACTGGCCGCAGCAGCTACTATACTAATGAACGTGGTTCTACAGCTCTTTCATATCGGTTCGAGCTATTGGTTGGCAGAATGGTCCGACAACGAGAACGAAGTTGTTAACAGTACTATGAATTTGAACCAGCGGAACAAGTACCTCGCAGTATACGCTGGCCTCGGTATGGGACAAGCGATATCGTCATTTCTAGCCGACTTGATACCATACTTGGCGTGCTGGCGAGCTGCGAAGGTCATCCACGAACTGTTACTGGACAATGTGTTAAAGACGCCGTTGCATTTTTTCGAAGTCACGCCTATTGGCAGAATACTGTCAAGATTCTCTAAAGATATTGAAATTATTGACTCTATGCTACCTTCTCAATTAATCAATGGGGTGTATTGCGTCTTCGAACTCATTGGCATTTTATTCGTGATAAGCTTGTCGACGCCATCATTCTTAGCAATAGTTGTACCAGTAGGTCTAGTGTACTATGTAATACAACGGTTCTACGTGGCTACGTCTCGTCAGCTCAAGCGGCTAGAGTCCATAGCTCGCTCGCCGATATTCTCACACTTCGGCGAAACGATCAGTGGAGCAGCCACCATTCGCGCTTTCAACGTAACCGAGAGGTTTATTGAAGAATCAAATGAAAAGTTAGATCGCAACCTCGCTTATTGCTATGCGATTGTAGTAGGAAAGCGATGGCTTGGTTTCCGATTAGAATTCATTGGAAACTTCATATTATTTTTCGCTGCAATGTTTGCTGTTCTCAGCAGAGATACTATAAGCTCGGGTCTCGTGGGACTTTCCTTAACCTACGCTATGCAGGTAACTGCATCGTTGAATTGGCTTGTTCGGCTAGCTTCTGAAATTGAAAGTAATATTGTAGCTGTAGAACGGATAAAAGAATACTCTGAGAAAAATAAGGAAGCTGCGTGGAACTTAGGGAAAGGGCCCGGCGTGACGTGGCCCGAGACGGGAGCGCTACAGCTGGAGCAGCTGACGCTGGAGTACCGCCCCGGCGAGCCGGCGCTGCGTGACGTCACGTGCACGGTCGCGCCGCGCGACAAGCTCGGCATCGTGGGACGCACCGGCGCCGGCAAGTCTACTCTCACGCTCGGGCTCTTCAGGATCGTGGAGGCAGCCGCCGGACGCATCCTGATCGACGGCGTCGACATCGCGACCCTCGGGCTGCACCAGCTGCGGTCGCGCATCACCATCATCCCGCAGGAGCCGATCCTGTTCTCGGGCACGCTGCGCACCAACCTGGACCCGTTCGAGGCGTATAGCGACGAGGAGATCTGGCGCGCGCTGGAACACGCCCACCTCCGTGCCTTCGTGCAGGGGCTGCCGGCCGGGCTGCGGCACGAGGTGGCGGAGGGCGGCGAGAACCTGTCGGTGGGACAGCGCCAGCTCGTGTGCCTGGCGCGCGCGCTGCTACGCAAGACGCCGCTGCTGGTGCTGGACGAGGCCACCGCGGCCGTCGACCTCGAGACTGACGACCTCATCCAGAAGACGATCCGCTCGGAGTTCGCGTCGTGCACGGTGCTCACTATCGCGCACCGCCTCAACACCATCATGGACTCCACCAAAGTGATGGTGCTCGACCGCGGGCAGCTCGTAGAATATGCGGCCCCTCAACAACTACTTAACGATAAAAACTCCATTTTCTACTCCTTAGCAAAAGATGCTGGAATTGTCAGTTGA

Protein

MTIYFRLPQTLAFQHIMKILTFTLSASLVWLNKKHGMRASGVLFFFWLLLAVIEVPRLWCKALELKMNFVNGIQYGFISLAIHYGLIVLLLILNCFADAAPRDSVYTDSQNQCPERSAGFLSRLTFSWFDSLVLKGYRKEFEEGDVWDLNYQESSSEVVPRFKKYWEQPANRRNSSTKHIKAKFRRRSTDRTMKTNTKNRTVSILPALCFAFGGQFMFGTFLKLLSDISIFLSPQLLKLLIGFISSDEPTWRGYLYSFLFFGCAALETTLLSHYTLKMNIVGMRIRTALTNAIYQMALRMNNTTRKQSTVGEIINLMSVDAQRFVSLTSTLNMIWSAPFQIVLAIYFLWGVLGPSVLAGLAVMILLIPMNGFIARMEEKLEIRLMKFKDNRIKIMNEVLNGIKVLKMYAWELSFQGQIDQVRNKELNILKKVIYLDSLTSLTWSATPFLVSLTSFGCFILVNDSESLDSKKLFVALSLFNILRYPLMMLPNTISNIVQTSVSIKRLNKFLNSTVLDLESIEHDPQYSYPITVENGHFSWEGQDSSTVLRNINLRVPRGSLVAIVGAVGAGKSSLLSALLGEMTKVSGRVNVHGTIAYVSQEPWIQNATLKDNILFGKPFNKYKYKNVLNACTLVQDLEIFPGGDLTEIGEKGINLSGGQKQRVSLARAVYHEADNYLLDDPLSAVDSHVGKHIFDKVIGPAGLLKDRTRVWVTHNVSYLAQTDLVVVLRDGQVSEAGSYQHLLEKKGAFADFLLHHLSDAERSSVESVRKQDHEYRCSRTESHQNLQRIRLHSESNSEAEDRSGKLAISFKRSIEEIILNKSAEHVSYTEKEKSERGSVSWMVYKHYLKNIGVLAAAATILMNVVLQLFHIGSSYWLAEWSDNENEVVNSTMNLNQRNKYLAVYAGLGMGQAISSFLADLIPYLACWRAAKVIHELLLDNVLKTPLHFFEVTPIGRILSRFSKDIEIIDSMLPSQLINGVYCVFELIGILFVISLSTPSFLAIVVPVGLVYYVIQRFYVATSRQLKRLESIARSPIFSHFGETISGAATIRAFNVTERFIEESNEKLDRNLAYCYAIVVGKRWLGFRLEFIGNFILFFAAMFAVLSRDTISSGLVGLSLTYAMQVTASLNWLVRLASEIESNIVAVERIKEYSEKNKEAAWNLGKGPGVTWPETGALQLEQLTLEYRPGEPALRDVTCTVAPRDKLGIVGRTGAGKSTLTLGLFRIVEAAAGRILIDGVDIATLGLHQLRSRITIIPQEPILFSGTLRTNLDPFEAYSDEEIWRALEHAHLRAFVQGLPAGLRHEVAEGGENLSVGQRQLVCLARALLRKTPLLVLDEATAAVDLETDDLIQKTIRSEFASCTVLTIAHRLNTIMDSTKVMVLDRGQLVEYAAPQQLLNDKNSIFYSLAKDAGIVS

Uniprot

A0A220A455   A0A2H4KAX1   A0A0F6PP97   D2Y5V6   A0A0F6PQJ9   A0A1W4XTX1   + More
A0A158NRB1   A0A1B6E1F3   A0A1B6EGY9   A0A139WC08   A0A1Y1N5M9   A0A1W4XSV3   A0A067RTQ5   A0A1W4XIR5   A0A182H2B8   A0A1Y1N973   E2B8D1   A0A0Q9X475   A0A1J1IJS3   A0A1L8DUP5   K7J1C7   A0A0M8ZP27   A0A026W727   A0A0Q9WLS5   A0A1I8PGD2   A0A0Q9WLR3   A0A1W4XTS4   A0A2A3EBU1   A0A0Q9WVA8   A0A069DZT4   A0A023F4D8   A0A1I8PGJ8   A0A1I8PGB1   A0A1I8M6A2   A0A0Q9XGP2   A0A0Q9XB26   A0A224X9P4   A0A0Q9WYS7   A0A0R3NUI1   A0A0Q5WA21   A0A0Q9XDD3   A0A1I8M6A1   A0A1I8M699   A0A1Q3FWR2   A0A1I8M694   A0A0Q9WLL0   A0A0Q9WL68   A0A0P9BPP2   A0A0Q9WXE7   A0A034V6X7   X1WW89   A0A1I8M6A6   A0A1I8M6B5   A0A0Q9X3T7   A0A0Q9WX91   A0A0Q9XEN4   A0A0Q9WMZ8   Q7KTB7   A0A125RM75   A0A0J9R1I1   A0A336KSQ1   A0A154PCK7   A0A0Q9WWH8   A0A1I8PGJ1   A0A1I8PGK1   A0A1I8PGC3   A0A1I8PGB4   A0A1I8PGB6   A0A1W4V5U0   A0A1I8PGL6   A0A3R5WTB4   A0A146M0N2   A0A1I8PGJ2   A0A1I8PGC8   A0A1I8PGK7   A0A336MD69   Q29L70   A0A0R1DK17   A0A1Q3FWN9   A0A0Q9XGA4   A0A1I8M6B3   A0A0Q9X3Q7   A0A1S4F8S7   A0A161ANL7   A0A1I8M698   V5I844   A0A1I8M691   A0A1I8M692   A0A1I8M687   A0A0R3P0Y9   A0A1L8DUK0   A0A2S2QJQ0   A0A336KWU5   B4KIM7   A0A0Q9WL82   A0A0P8XGE2   A0A0Q9WLJ8   T1PED2   A0A0Q9WXA1   T1PG89  

Pubmed

25662100    21347285    18362917    19820115    28004739    24845553    + More
26483478    20798317    17994087    20075255    24508170    26334808    25474469    25315136    15632085    18057021    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    26823975    17550304    17510324   

EMBL

KY796050    ARE31046.1    KY484778    ASS36020.1    KM453742    KP335687    + More
AKC34057.1    AKC34899.1    GU357490    ADB45217.1    KP335686    KM244042    AKC42335.1    ADTU01023843    ADTU01023844    GEDC01025119    GEDC01005564    GEDC01003693    JAS12179.1    JAS31734.1    JAS33605.1    GEDC01001842    GEDC01000137    JAS35456.1    JAS37161.1    KQ971371    KYB25508.1    GEZM01012123    JAV93174.1    KK852424    KDR24195.1    JXUM01023791    JXUM01023792    JXUM01023793    KQ560671    KXJ81341.1    GEZM01012122    JAV93175.1    GL446310    EFN88051.1    CH933807    KRG02669.1    CVRI01000054    CRL00440.1    GFDF01003928    JAV10156.1    KQ435944    KOX68195.1    KK107390    EZA51426.1    CH940661    KRF85626.1    KRF85619.1    KZ288292    PBC29188.1    KRF85617.1    GBGD01000085    JAC88804.1    GBBI01002685    JAC16027.1    KRG02659.1    KRG02666.1    GFTR01008802    JAW07624.1    KRF85621.1    CH379061    KRT04588.1    CH954177    KQS70503.1    KRG02658.1    GFDL01003050    JAV31995.1    KRF85625.1    KRF85612.1    CH902620    KPU73781.1    KRF85613.1    KRF85627.1    KRF85631.1    GAKP01021442    JAC37510.1    ABLF02016184    ABLF02016186    KRG02667.1    KRF85614.1    KRG02657.1    KRF85622.1    AE014134    AAS64699.1    KT428603    AMD40296.1    CM002910    KMY89971.1    UFQS01000890    UFQT01000890    SSX07519.1    SSX27859.1    KQ434864    KZC08998.1    KRF85615.1    MH172499    QAA95906.1    GDHC01006312    JAQ12317.1    SSX07520.1    SSX27860.1    EAL32954.3    CM000157    KRJ97652.1    KRJ97659.1    GFDL01003048    JAV31997.1    KRG02664.1    KRG02662.1    KF828785    AIN44102.1    GALX01005330    JAB63136.1    KRT04598.1    GFDF01003977    JAV10107.1    GGMS01008735    MBY77938.1    UFQS01000910    UFQT01000910    SSX07613.1    SSX27951.1    EDW11370.2    KRF85628.1    KPU73769.1    KRF85624.1    KA647049    AFP61678.1    KRF85630.1    KA647155    AFP61784.1   

Proteomes

UP000192223    UP000005205    UP000007266    UP000027135    UP000069940    UP000249989    + More
UP000008237    UP000009192    UP000183832    UP000002358    UP000053105    UP000053097    UP000008792    UP000095300    UP000242457    UP000095301    UP000001819    UP000008711    UP000007801    UP000007819    UP000000803    UP000076502    UP000192221    UP000002282   

PRIDE

Q7KTB7   

Pfam

PF00664   ABC_membrane        + More
PF00005   ABC_tran
PF16185   MTABC_N
PF08190   PIH1
PF18201   PIH1_CS

Interpro

IPR003593   AAA+_ATPase        + More
IPR003439   ABC_transporter-like       
IPR005292   Multidrug-R_assoc       
IPR017871   ABC_transporter_CS       
IPR011527   ABC1_TM_dom       
IPR027417   P-loop_NTPase       
IPR036640   ABC1_TM_sf       
IPR032410   MTABC_N       
IPR041442   PIH1D1/2/3_CS-like       
IPR012981   PIH1_N       

SUPFAM

SSF90123   SSF90123        + More
SSF52540   SSF52540       

Gene 3D

1.20.1560.10    

ProteinModelPortal

A0A220A455   A0A2H4KAX1   A0A0F6PP97   D2Y5V6   A0A0F6PQJ9   A0A1W4XTX1   + More
A0A158NRB1   A0A1B6E1F3   A0A1B6EGY9   A0A139WC08   A0A1Y1N5M9   A0A1W4XSV3   A0A067RTQ5   A0A1W4XIR5   A0A182H2B8   A0A1Y1N973   E2B8D1   A0A0Q9X475   A0A1J1IJS3   A0A1L8DUP5   K7J1C7   A0A0M8ZP27   A0A026W727   A0A0Q9WLS5   A0A1I8PGD2   A0A0Q9WLR3   A0A1W4XTS4   A0A2A3EBU1   A0A0Q9WVA8   A0A069DZT4   A0A023F4D8   A0A1I8PGJ8   A0A1I8PGB1   A0A1I8M6A2   A0A0Q9XGP2   A0A0Q9XB26   A0A224X9P4   A0A0Q9WYS7   A0A0R3NUI1   A0A0Q5WA21   A0A0Q9XDD3   A0A1I8M6A1   A0A1I8M699   A0A1Q3FWR2   A0A1I8M694   A0A0Q9WLL0   A0A0Q9WL68   A0A0P9BPP2   A0A0Q9WXE7   A0A034V6X7   X1WW89   A0A1I8M6A6   A0A1I8M6B5   A0A0Q9X3T7   A0A0Q9WX91   A0A0Q9XEN4   A0A0Q9WMZ8   Q7KTB7   A0A125RM75   A0A0J9R1I1   A0A336KSQ1   A0A154PCK7   A0A0Q9WWH8   A0A1I8PGJ1   A0A1I8PGK1   A0A1I8PGC3   A0A1I8PGB4   A0A1I8PGB6   A0A1W4V5U0   A0A1I8PGL6   A0A3R5WTB4   A0A146M0N2   A0A1I8PGJ2   A0A1I8PGC8   A0A1I8PGK7   A0A336MD69   Q29L70   A0A0R1DK17   A0A1Q3FWN9   A0A0Q9XGA4   A0A1I8M6B3   A0A0Q9X3Q7   A0A1S4F8S7   A0A161ANL7   A0A1I8M698   V5I844   A0A1I8M691   A0A1I8M692   A0A1I8M687   A0A0R3P0Y9   A0A1L8DUK0   A0A2S2QJQ0   A0A336KWU5   B4KIM7   A0A0Q9WL82   A0A0P8XGE2   A0A0Q9WLJ8   T1PED2   A0A0Q9WXA1   T1PG89  

PDB

6BHU     E-value=0,     Score=3277

KEGG

101746565    K05665 ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3] | (RefSeq) multidrug resi

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)

GO

GO:0008514   GO:0005887   GO:0042626   GO:0005524   GO:0005774   GO:0016020   GO:0055085   GO:0016021   GO:0005886   GO:0009636   GO:0097254   GO:0006810   GO:0016887   GO:0005215   GO:0043022   GO:0005488   GO:0003707   GO:0051537   GO:0022857  

Length:

1416

Number of predicted TMHs:

14

Exp number of AAs in TMHs:

295.0844

Exp number, first 60 AAs:

40.8949

Total prob of N-in:

0.05342

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  38

TMhelix

39  -  60

outside

61  -  74

TMhelix

75  -  97

inside

98  -  199

TMhelix

200  -  222

outside

223  -  253

TMhelix

254  -  276

inside

277  -  323

TMhelix

324  -  346

outside

347  -  350

TMhelix

351  -  373

inside

374  -  439

TMhelix

440  -  462

outside

463  -  471

TMhelix

472  -  494

inside

495  -  850

TMhelix

851  -  873

outside

874  -  901

TMhelix

902  -  924

inside

925  -  975

TMhelix

976  -  995

outside

996  -  999

TMhelix

1000  -  1019

inside

1020  -  1082

TMhelix

1083  -  1105

outside

1106  -  1416

 

 

Pi

19.311822

Theta

17.929452

Tajima's D

-1.004854

CLR

0.637045

CSRT

0.131893405329734

Interpretation

Uncertain