SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07380
Annotation
PREDICTED:_TNF_receptor-associated_factor_family_protein_DDB_G0272098-like?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.127
 

Sequence

CDS
ATGGGTGCTAAACAAAGCAAAAGATCGGTCGACATAAGCGGCAAGGAAGCGGAAAGCGCTGGAGAGGTGGCCGCAGCCGGCGCTGGTGGTGAAGGTCGCGTCGAGCAGCTAGCCGATGTTGATGCACTTAAACCACAAATTAATGGCGACGCCCATATCCATGAACAGACTGCCAAGGAGAAAGAGTTGGATAGTGGCACTCCAGAAAATGAAAAAGACGCTACTACTGAAAAAGAAGCAATAGAGATTAGCAATGAAAAAGAAGCTGGTCCTGTAACCAACGGCGAATCTGAACAGAAAGCAGAAAATGGAGAATCAGTTACTACTACTCCAGATGACGGCAAGAAACCAAAGAAAGAAAAAGTGAAAAAGAAGTGGTCGCTCAGGTCTATCAGCTTCAGCAGGAAAGATAAGCCCAAACAAGAAAAGAAGCAAAAGGAAGAGGAGACTAAGACAAATGGTGAACCGGAAAAGGTTCCCGAAGAGGTGATTGAAGCAACTGCTGAACAATCTCAAAATGAAACTGTCGAAGAAGTGAAAACTCCGAGCGAAGCAAATGAGGATAAGACTCCTGAAACTCCTGTTACTGAACCCATCACAAATGGCCACAGCACACCCGAGACTCCTCAGGTCGAGACTCTAGCAGCTGATCAGCCGGTTGAGCACGTTGTTAATCCCGATGCTGACAAGACTGAATCCAAGGCTGAGCCTGAACCCGAACAATTACCTGTTAATGGGCTCTCTTTGGAACAATCCAAAACCGAAACTCCTGAAGTAAATGTGAAAACGGTAGAAATTGTTGAGAGTAAAATTGAAGAATCTGTAGCTGAAAAAGAAGTTGTGTCCGTTCCTGAAATCCCTGTTATAAAAGAGGTTTGTGTTGAAAAAGTACCTTTGATAGAGCCATCGCCTCCTCCGCTTCCTGCTAATCCTCCTCCCTCCTCGGTCGCATCCTTTGCTGCCACCACTATGGCACCAGAAATGACTGATGCTTCGCTACCTAACACTGCTGAAACCACATTCACAACACAAGAGCCTGCCGTAACTAATGTGGCTGTACACAATGACACACACGCTGTAAATCCTACGGCTGTTTTAAGCCAGTCACAAACCAATAATACTATCCCTCTCCCATTAAAGGAAGAAATTATAGAAACCACTGATCACAAACCAGAAAAGCTAACTGAAGAAGTGGCTCAAATTTCGGTCGAATTAGCAGACACTGAAGAGAAGATTTCTGAAGTTTTAAAGGATAATTCCAATGTAGAAACAAAAGCTGAAATAACACTCTTTGAAGAAACCACAATAAAAGAAATAAAAAATGAAGATATAGTCTTAAAAGGTCTGATTCAGGATGATATTGCTCATGACACAATTGGTGAAATACAACTGCAAAATAAGCTAGAAAATGCTTCTGAGACTACTAAAAATGAAGAGATAAAACCTGAAGATGGAGATAAAAACAACCAAGAGCCAATACAAAGTGAATTGGTAGCTATTATTGAAAATACAGATCAAAATGGTGGTAACATTAATAAATTGACTTGCGAACAGAACATTGAACAATTAAAAACAGAAAATCAAACAGAATCGCCTACTATTAATATTGACAATAACGATTGTAACAACGTAAACGAGAGTGTAATTTCAGAAGTAGTACCAGACAATCAAGAGCTCTGTAGCATTGATGAAATTAAAACACCTTCATTTGAAGAGTTATTAGAACCCACAGAGGTGACGAAAATGGACATAACAAACATGGAAAAAAAAGATGATTTGAATGACGATGTTGAAGAGTTCCCAGAACCTCCCTCTTTGTCAGGTGACGAAGTTAATTTGACGGAAATTGATGACATTACTCTACATTCGGAATCAAACTTGACAACTAAAGAAGACATTTCGGAGAACGAACATATCCCCGATGACGTTAAACAAAATAACAGTAACGAAAACATGAATAAAACTGACGACGGAAAGATATCTGAGCAATGTGACACAAAACAAACCAACGGGACAGAAGAGATCGACAACATAAAAGAAAGGGAAGAATCTGCTGGAAACAAAATCATTGACGAATGTACAGATATGGTAGAAAATATAATGGAGATCGGCGCGTGCAACGGTAACGCGCAGCTGGCGGCGAAGCAGCAGGCGAGCGAGGAGCAAGCGTCGCCGCCACTCGGTCTGCACACGCCACAGGAACCTCTCCCGATCTCTGACAAGATGGATTTAATTCCCGACGTACCCTTTCCAGAATTAAAACCTGAAACTGAAACATCGTCGGATGTAGCGGTGGCCAATTAG
Protein
MGAKQSKRSVDISGKEAESAGEVAAAGAGGEGRVEQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDDGKKPKKEKVKKKWSLRSISFSRKDKPKQEKKQKEEETKTNGEPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPEVNVKTVEIVESKIEESVAEKEVVSVPEIPVIKEVCVEKVPLIEPSPPPLPANPPPSSVASFAATTMAPEMTDASLPNTAETTFTTQEPAVTNVAVHNDTHAVNPTAVLSQSQTNNTIPLPLKEEIIETTDHKPEKLTEEVAQISVELADTEEKISEVLKDNSNVETKAEITLFEETTIKEIKNEDIVLKGLIQDDIAHDTIGEIQLQNKLENASETTKNEEIKPEDGDKNNQEPIQSELVAIIENTDQNGGNINKLTCEQNIEQLKTENQTESPTINIDNNDCNNVNESVISEVVPDNQELCSIDEIKTPSFEELLEPTEVTKMDITNMEKKDDLNDDVEEFPEPPSLSGDEVNLTEIDDITLHSESNLTTKEDISENEHIPDDVKQNNSNENMNKTDDGKISEQCDTKQTNGTEEIDNIKEREESAGNKIIDECTDMVENIMEIGACNGNAQLAAKQQASEEQASPPLGLHTPQEPLPISDKMDLIPDVPFPELKPETETSSDVAVAN

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
767
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00030
outside
1  -  767
 
 

Population Genetic Test Statistics

Pi
20.576244
Theta
17.732731
Tajima's D
0.553918
CLR
0.800762
CSRT
0.532723363831808
Interpretation
Uncertain
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