Gene

KWMTBOMO07364

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr12(+):11296540-11297774      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.064 Mitochondrial   Reliability : 1.428 Nuclear   Reliability : 1.691

CDS

ATGGAGTGGACGCTTAAAGAAGCCAGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAAATTTTAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACATGAAAAATTTTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGTAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATATCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCACGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCAAGTCCAGATTTGAATCCGTTAGATTACAAGATAAGGCAACACTTGGAGGAAAAGGCGTGCTTAAAGCCTCATGCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGATCATTTTGAATAA

Protein

MEWTLKEASVAVIALHRCGYAPIQIFNILKNFNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKHEKFFTVEESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNVVVYQNTVLTNLVEPVSHIMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIRQHLEEKACLKPHANLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGDHFE

Similarity

Belongs to the TGF-beta family.

Uniprot

A0A3S2LTJ6   Q8ITJ9   B1Q3L5   B1Q3L9   B9A8E5   B1Q3L8   + More
A0A3S2NF68   A0A3S2M6Z0   A0A3S2M6X4   P90693   A0A3S2LQG1   A0A226D9B6   A0A3S2LXK8   A0A1I7SJQ8   A0A016TV39   E3ND45   E3N6E8   A0A1I8CC25   A0A368FVD9   E3NJL6   A0A2G5SF52   A0A1I7T5D4   A0A0N4XXA5   A0A0C2GWR6   A0A016W3L5   E3M065   E3N9D7   E3MXK8   A0A1I7RU52   A0A368H7I1   A0A2G5T9N6   E3M897   E3MXK7   E3N1H1   E3MQK2   W6NUW0   B6IKQ6   A0A183F5L1   A0A3P7TF39   H3EXA9   E3N4H8   H3E4E9   E3NHK7   E3NDP6   E3M1J2   E3NHD7   A0A016S9F8   A0A016TQR4   H3E1D2   A0A016VJ32   A0A2G5TN79   E3N749   A0A2G5SZY0   A0A016WN34   A0A2G5TSG2   A0A016S0M1   H3DS69   A0A2G5VIT1   A0A016WKB6   H3FF09   H3ESY7   A0A016WY15   A0A2H2IVX6   H3FLR7   A0A2H2I0K4   A0A2H2J0T6   A0A0N4XTP7   A0A2G5TZM3   A0A0N4Y502   A0A1I7TL85   H3EZH8   H3DZR2   A0A0K9NHE3   H3FES1   T1PDL9   A0A1L5BY18   A0A183FT12  

Pubmed

12653938    9014339    21909270    25730766    26829753    14624247    + More
18806794    26814964    25527032   

EMBL

RSAL01000012    RVE53510.1    AF461149    AAN06610.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB363028    BAG15927.1    AB473770    BAH20555.1    AB363018    BAG15926.1    RSAL01000063    RVE49524.1    RSAL01000021    RVE52408.1    RSAL01000022    RVE52367.1    U47917    AAB47739.1    RSAL01000470    RVE41612.1    LNIX01000030    OXA41211.1    RSAL01000133    RVE46339.1    JARK01001411    EYC06502.1    DS268606    EFO93488.1    DS268539    EFO88027.1    JOJR01000583    RCN36166.1    DS268747    EFP00909.1    PDUG01000012    PIC13506.1    UYSL01019905    VDL71189.1    KN728607    KIH63514.1    JARK01001337    EYC34439.1    DS268420    EFO87874.1    DS268565    EFO90304.1    DS268492    EFP11674.1    JOJR01000015    RCN51257.1    PDUG01000005    PIC23776.1    DS268428    EFO94379.1    EFP11689.1    DS268508    EFO83264.1    DS268466    EFP06959.1    CAVP010059404    CDL95787.1    HE601413    CAS00486.1    UZAH01001595    VDO19836.1    DS268525    EFO85497.1    DS268679    EFO98285.1    DS268612    EFO94085.1    DS268421    EFO88618.1    DS268673    EFO98001.1    JARK01001601    EYB87313.1    JARK01001418    EYC05389.1    JARK01001345    EYC27589.1    PIC28734.1    DS268545    EFO88382.1    PDUG01000006    PIC20538.1    JARK01000176    EYC41234.1    PIC29926.1    JARK01001658    EYB84158.1    PDUG01000001    PIC51673.1    JARK01000255    EYC39473.1    JARK01000059    EYC44525.1    UYSL01019770    VDL69590.1    PDUG01000004    PIC32571.1    UYSL01020440    VDL74616.1    LFYR01002220    KMZ56176.1    KA646003    AFP60632.1    KX931010    APL98300.1   

Proteomes

UP000283053    UP000198287    UP000095284    UP000024635    UP000008281    UP000095286    + More
UP000252519    UP000230233    UP000095282    UP000038043    UP000271162    UP000025227    UP000008549    UP000050761    UP000005239    UP000005237    UP000036987   

PRIDE

Q8ITJ9    B1Q3L5    B1Q3L9    B1Q3L8    P90693   

Pfam

PF00019   TGF_beta        + More
PF13358   DDE_3
PF00292   PAX
PF10320   7TM_GPCR_Srsx

Interpro

IPR001839   TGF-b_C        + More
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR009057   Homeobox-like_sf       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR036906   ATPase_V1_fsu_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       

SUPFAM

SSF57501   SSF57501        + More
SSF46689   SSF46689       

Gene 3D

2.10.90.10     1.10.10.10     3.40.50.10580    

ProteinModelPortal

A0A3S2LTJ6   Q8ITJ9   B1Q3L5   B1Q3L9   B9A8E5   B1Q3L8   + More
A0A3S2NF68   A0A3S2M6Z0   A0A3S2M6X4   P90693   A0A3S2LQG1   A0A226D9B6   A0A3S2LXK8   A0A1I7SJQ8   A0A016TV39   E3ND45   E3N6E8   A0A1I8CC25   A0A368FVD9   E3NJL6   A0A2G5SF52   A0A1I7T5D4   A0A0N4XXA5   A0A0C2GWR6   A0A016W3L5   E3M065   E3N9D7   E3MXK8   A0A1I7RU52   A0A368H7I1   A0A2G5T9N6   E3M897   E3MXK7   E3N1H1   E3MQK2   W6NUW0   B6IKQ6   A0A183F5L1   A0A3P7TF39   H3EXA9   E3N4H8   H3E4E9   E3NHK7   E3NDP6   E3M1J2   E3NHD7   A0A016S9F8   A0A016TQR4   H3E1D2   A0A016VJ32   A0A2G5TN79   E3N749   A0A2G5SZY0   A0A016WN34   A0A2G5TSG2   A0A016S0M1   H3DS69   A0A2G5VIT1   A0A016WKB6   H3FF09   H3ESY7   A0A016WY15   A0A2H2IVX6   H3FLR7   A0A2H2I0K4   A0A2H2J0T6   A0A0N4XTP7   A0A2G5TZM3   A0A0N4Y502   A0A1I7TL85   H3EZH8   H3DZR2   A0A0K9NHE3   H3FES1   T1PDL9   A0A1L5BY18   A0A183FT12  

PDB

5CR4     E-value=2.96426e-08,     Score=137

KEGG

101740752    no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0005576   GO:0008083   GO:0003677   GO:0006355   GO:0016021   GO:0034220   GO:0004930   GO:0004519   GO:0007186   GO:0001607   GO:0005852   GO:0006446   GO:0043022   GO:0005488   GO:0003707   GO:0051537  

PANTHER

PTHR11848  

Subcellular location

Secreted  

Length:

278

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.72638

Exp number, first 60 AAs:

1.4918

Total prob of N-in:

0.05756

outside

1  -  278

 

 

Pi

1.398065

Theta

3.109399

Tajima's D

-1.486447

CLR

22.009448

CSRT

0.0534473276336183

Interpretation

Uncertain