Gene

KWMTBOMO07359

Pre Gene Modal

BGIBMGA010681

Annotation

PREDICTED:_acyl-CoA_desaturase_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(+):11168438-11176474      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.922

CDS

ATGCCTCCCCAAAGGAAACAGGAGGCTTCGTGGGTATTGTACGAAGCCGACGCCAATAACCTGCCAGAAGATGCACCGCCCCATGTACCTCCCTCAGCAGAGAAGAGACCTTGGAAGATTGTGTGGAGAAATGTGATTCTGTTCTTTATTCTGCATGTCGGTGGTGTTTATGGAGGGTACTTGTTCCTTTTCAAAGCCATGTGGAGGACTTCTATATTCGCCATATTTTTGTACTTGTGTTCGGGATTGGGTATCACAGCTGGCGCGCACAGACTTTGGGCACACAAGTCCTATAAAGCTCGGCTGCCACTGAGAATATTACTCACCATATTCAATACTATCGCTTTTCAGGATGCCGTAGTGGATTGGGCCCGTGATCATCGCATGCACCACAAATATTCAGAGACCGATGCGGACCCCCACAACGCAACCCGAGGATTCTTCTTTTCCCACATTGGCTGGTTGTTGTTGAGGAAGCATCCCGAAATCAAAGCCAAAGGCCATACCGTCGACGTGAATGATCTGCGCAATGATCCTATCCTACGTTTTCAGAAGAAGTACTACCAAATTTTAATGCCTTTAGCCTGTTTCATCATGCCTACATATGTACCAACATTGTGGGGAGAAACAGTTTGGAACTCCTTCTACGTCTGCGCAATTTTCCGCTACGTATATGTTCTCAATATAACTTGGTTGGTCAACTCAGCAGCACATATGTGGGGTAGCAAACCTTACGATAAGAACATCAACCCCGTCGAAACCAGGCCCGTTTCGTTAGTGGTGCTCGGCGAAGGATTCCACAACTACCATCACACGTTCCCGTGGGATTACAAAACCGCCGAACTTGGAGATTATTCCCTTAATTTGAGCAAGCTGTTCATTGATTTCATGGCGAAGATCGATTGGGCTTATGACCTTAAGACAGTATCAACTGACGTCATTCAGAAACGAACGAAAAGGACAGGTGATGGAAGCCATCCCGTATGGGGATACGATGTTGGGGAGGTCGCTACTGAAGACAAAACTGATACTACTAATCTTGTCAATTCTAAAGTGCTCTGA

Protein

MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMPLACFIMPTYVPTLWGETVWNSFYVCAIFRYVYVLNITWLVNSAAHMWGSKPYDKNINPVETRPVSLVVLGEGFHNYHHTFPWDYKTAELGDYSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSHPVWGYDVGEVATEDKTDTTNLVNSKVL

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JMC8   Q9GU81   Q6US83   A0A291P0I4   A0A0U2F3H0   A0A0U2F3A5   + More
Q8MZZ1   Q9NB23   A0A076FX42   A0A068FJD0   U5KFM6   A0A1V0M873   A0A2H1VTC6   M4Q3V1   O44428   T1RTG5   A0A2A4IXN6   A0A212EGS7   S4PW31   A0A194R3D7   B7SB78   Q95P47   W5QMG3   A0A194PI06   Q6A4M6   G8FQ86   G8FQ85   G8FQ84   G8FQ88   A0A1L8D6C5   A0A059TBF8   B6CBS3   A0A0L7L9K4   Q7K402   Q95NQ5   A0A3S2PIU8   A0A059TBF5   T1RTD3   Q9NB25   A0A0U2F3B9   A0A291P0G3   T1RTF5   Q8ITE8   A9YRX5   A0A0U2F3B3   Q8MZZ4   Q8ITE5   A0A2H1V8Q0   Q8ITE4   A0A076FR53   I7B370   Q8WQQ0   A0A1E1VYJ4   A9ZSZ7   Q9NGQ8   Q6US82   A0A212FG51   A0A0P0EGH8   Q4A182   U5KFT8   B7SB75   E3TMV0   B7SB77   S4PEM6   B7SB76   A0A194R0B7   G8FQ63   G8FQ64   A0A194PHD4   A0A0M3L9S4   Q7K403   Q9NGQ7   A0A1L8D6B6   G8FQ62   I3QPX9   Q75PL6   H9JLG4   D8UUT5   A0A336MXG6   Q9NG28   A0A336M2F9   W6ACM3   B6CBS2   B3M2R7   Q7K4Y0   Q94541   Q9U972   A0A1W4UAN6   A0A182UTT3   A0A182WSS9   A0A182LA27   F5HMH9   A0A182HLN2   Q9U967   A0A1L8EEG9   A0A182QY62   A0A182NRU1   A0A2M3YY30   A0A182Y3S6   B4QSA3  

Pubmed

19121390    15544945    28986331    12524345    12770579    11483431    + More
24817326    26385554    24053512    28349297    10380655    24500170    22118469    23622113    26354079    20403437    11805319    24862548    15527989    22291612    18831750    26227816    12237399    28756777    15455060    18405835    24211206    26445454    20691782    12213232    17994087    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    9501419    10920187    20966253    12364791    14747013    17210077    25244985   

EMBL

BABH01033493    BABH01033494    AF182406    AAG16902.1    AY362877    AAQ74257.1    + More
MF687526    ATJ44452.1    KP008121    MF687586    AKU76408.1    ATJ44512.1    KP008114    AKU76401.1    AF482909    AAM28484.2    AF272345    AAF81790.2    KF960739    AII21941.1    KJ622049    AID66657.1    JX989154    AGR49313.1    KU755473    ARD71183.1    ODYU01004327    SOQ44077.1    KC422669    AGH12218.1    AF038050    AAB92583.1    JX531656    NWSH01005894    AGO45841.1    PCG63861.1    PCG63863.1    AGBW02015035    OWR40684.1    GAIX01007498    JAA85062.1    KQ460845    KPJ12039.1    EU152404    ABX71813.1    AF402775    AAK94070.1    JQ978773    KM378663    AGD98721.1    AKJ32407.1    KQ459603    KPI92683.1    AF518010    AF518011    AAQ12889.1    AAQ12890.1    JN022496    JN022497    AER29865.1    JN022495    AER29864.1    JN022494    AER29863.1    JN022498    AER29867.1    GEYN01000126    JAV02003.1    KF022098    AHW98359.1    EU152333    ABX71628.1    JTDY01002116    KOB72074.1    AY057863    AAL27034.1    AF430246    AAL29454.1    RSAL01000020    RVE52666.1    KF022094    AHW98355.1    JX531660    AGO45845.1    AF272343    AAF81788.1    KP008120    MF687582    AKU76407.1    ATJ44508.1    MF687527    KZ149911    ATJ44453.1    PZC78117.1    JX531653    NWSH01001519    AGO45838.1    PCG70996.1    AF518017    AAN39697.1    EU285579    ABX90048.1    KP008113    AKU76400.1    AF482906    AAM28481.2    AF518020    AAN39700.1    ODYU01001259    SOQ37220.1    AF518021    AAN39701.1    KF960740    AII21942.1    JX126483    AFO38464.1    AY061988    AAL35750.1    GDQN01011259    GDQN01009722    GDQN01007857    JAT79795.1    JAT81332.1    JAT83197.1    AB373031    BAF97042.1    AF243046    AAF44709.1    AY362878    AAQ74258.1    AGBW02008720    OWR52703.1    KT261693    ALJ30233.1    AM076338    CAJ27975.1    JX989152    AGR49311.1    EU152401    ABX71810.1    GU952765    ADO85598.1    EU152403    ABX71812.1    GAIX01006995    JAA85565.1    EU152402    ABX71811.1    KQ460883    KPJ11142.1    JN022473    AER29842.1    JN022474    JN022475    AER29843.1    KPI92821.1    KM366791    AIM40221.1    AY057862    AAL27033.1    AF243047    AAF44710.1    GEYN01000137    JAV01992.1    JN022472    AER29841.1    JQ729998    AFK13830.1    JQ729997    AB166852    AFK13829.1    BAD18123.1    BABH01005826    GQ225747    GQ225749    ADE58520.1    UFQS01001440    UFQT01001440    SSX10910.1    SSX30588.1    AF268275    JN022476    AAF73073.1    AER29845.1    UFQT01000109    SSX20158.1    KF835695    AHI54575.1    EU152332    ABX71627.1    CH902617    EDV42388.1    KPU79686.1    KPU79687.1    AE014297    AY051593    AAF54819.1    AAF54820.1    AAF54821.1    AAF54822.1    AAK93017.1    AAN13544.1    U73160    AAB17283.1    AJ245747    CAB52474.1    AAAB01008987    EAA43119.4    EGK97500.1    EGK97501.1    EGK97502.1    APCN01000909    AJ245748    CAB52475.1    GFDG01001755    JAV17044.1    AXCN02001148    GGFM01000428    MBW21179.1    CM000364    EDX13199.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000283053    UP000007801    UP000000803    UP000192221    UP000075903    UP000076407    UP000075882    UP000007062    UP000075840    UP000075886    UP000075884    UP000076408    UP000000304   

PRIDE

H9JMC8    Q9GU81    Q75PL6    H9JLG4    Q7K4Y0    Q94541    + More
Q9U972   

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       
IPR009160   Acyl-CoA_deSatase_haem/ster-bd       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JMC8   Q9GU81   Q6US83   A0A291P0I4   A0A0U2F3H0   A0A0U2F3A5   + More
Q8MZZ1   Q9NB23   A0A076FX42   A0A068FJD0   U5KFM6   A0A1V0M873   A0A2H1VTC6   M4Q3V1   O44428   T1RTG5   A0A2A4IXN6   A0A212EGS7   S4PW31   A0A194R3D7   B7SB78   Q95P47   W5QMG3   A0A194PI06   Q6A4M6   G8FQ86   G8FQ85   G8FQ84   G8FQ88   A0A1L8D6C5   A0A059TBF8   B6CBS3   A0A0L7L9K4   Q7K402   Q95NQ5   A0A3S2PIU8   A0A059TBF5   T1RTD3   Q9NB25   A0A0U2F3B9   A0A291P0G3   T1RTF5   Q8ITE8   A9YRX5   A0A0U2F3B3   Q8MZZ4   Q8ITE5   A0A2H1V8Q0   Q8ITE4   A0A076FR53   I7B370   Q8WQQ0   A0A1E1VYJ4   A9ZSZ7   Q9NGQ8   Q6US82   A0A212FG51   A0A0P0EGH8   Q4A182   U5KFT8   B7SB75   E3TMV0   B7SB77   S4PEM6   B7SB76   A0A194R0B7   G8FQ63   G8FQ64   A0A194PHD4   A0A0M3L9S4   Q7K403   Q9NGQ7   A0A1L8D6B6   G8FQ62   I3QPX9   Q75PL6   H9JLG4   D8UUT5   A0A336MXG6   Q9NG28   A0A336M2F9   W6ACM3   B6CBS2   B3M2R7   Q7K4Y0   Q94541   Q9U972   A0A1W4UAN6   A0A182UTT3   A0A182WSS9   A0A182LA27   F5HMH9   A0A182HLN2   Q9U967   A0A1L8EEG9   A0A182QY62   A0A182NRU1   A0A2M3YY30   A0A182Y3S6   B4QSA3  

PDB

4YMK     E-value=2.54972e-94,     Score=881

KEGG

692568    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) Desat3; acyl-CoA desat

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0006633   GO:0016021   GO:0016717   GO:0016491   GO:0004768   GO:0006636   GO:0045793   GO:0031410   GO:0042594   GO:0006723   GO:0010506   GO:0070328   GO:0045572   GO:0009744   GO:0042811   GO:0060179   GO:0040018   GO:0042593   GO:0048047   GO:0019216   GO:0005783   GO:0005506   GO:0005789   GO:0006629   GO:0007608   GO:0016020   GO:0005852   GO:0006446   GO:0043022   GO:0005488   GO:0003707   GO:0051537   GO:0055114  

PANTHER

PTHR11351  

Length:

353

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

91.63283

Exp number, first 60 AAs:

17.87889

Total prob of N-in:

0.93064

POSSIBLE N-term signal

sequence

inside

1  -  39

TMhelix

40  -  62

outside

63  -  71

TMhelix

72  -  94

inside

95  -  189

TMhelix

190  -  207

outside

208  -  210

TMhelix

211  -  233

inside

234  -  353

 

 

Pi

17.768123

Theta

21.836824

Tajima's D

-0.697743

CLR

1.21643

CSRT

0.2016399180041

Interpretation

Uncertain