SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07355
Pre Gene Modal
BGIBMGA010678
Annotation
PREDICTED:_uncharacterized_protein_LOC106714105_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 2.367
 

Sequence

CDS
ATGTCGACACCGCACGCGCAGCGCATCCTCTGCATCCTCGGATTTTTTATAGTGTTGTGTTCGGCTACAGTACCTGAACCTCAAACGGTCCACCAGCATGAAGTCGAAACGAAAAAAGTTGAATTGTTCGAAGGAGTGTCCGTGAAGATTCCCCTAGGCAAGAACACGAGCAGTATTATGTCCCTCGAAATCGAAACTGATAAGGGTGATCAGGAAGGACGGGGCAAAAAACAGAAACTTATGCAGAAGATTCTACCTTTATTCATCATGCCGTTCGTTCTACAGTCCGCAATTGTGCCTTTATTCCTGAGTATGCTTAAATTCATGCTCTTCAAATCCTTAATGGTCGGAAAACTAGCGCTTTTCCTCATTTTAATAAACGCTTTCAAAAATCATAATTCCGTGAAAGGTCGAGATTCAGAAATAGCGAACGTTCATTACGGCTATCACGACAGCGGTATGGAATATGGAGCTTATATTAACTAG
Protein
MSTPHAQRILCILGFFIVLCSATVPEPQTVHQHEVETKKVELFEGVSVKIPLGKNTSSIMSLEIETDKGDQEGRGKKQKLMQKILPLFIMPFVLQSAIVPLFLSMLKFMLFKSLMVGKLALFLILINAFKNHNSVKGRDSEIANVHYGYHDSGMEYGAYIN

Summary

Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676        + More
IPR042097   Aminopeptidase_N-like_N       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.974722
 
 
Length:
161
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.2766000000001
Exp number, first 60 AAs:
6.64837
Total prob of N-in:
0.67196
inside
1  -  83
TMhelix
84  -  106
outside
107  -  109
TMhelix
110  -  129
inside
130  -  161
 
 

Population Genetic Test Statistics

Pi
25.774536
Theta
15.445971
Tajima's D
-1.296588
CLR
0.477021
CSRT
0.0869456527173641
Interpretation
Uncertain
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