Gene

KWMTBOMO07351

Pre Gene Modal

BGIBMGA010611

Annotation

stearoyl-CoA_desaturase_5_[Bombyx_mori]

Location

Bomo_Chr12(-):10959731-10997937      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.244

CDS

ATGGCTCCGGCGCAACAGAACATTGAAGTTTGCACAGAAGTAATGGAACCTGCATTGGAATTAAGACTCACGTCTGATGGATGTAAAGACGAAAATAATGTGGAGCACTCCAAAAATAACAACACAGTCAAACAAAATAATATATTAAACGAGAAAACCAATAACGAAACAGACTTTGACATCAGCAAATATGAAGCAATGGAGTTCACGCCACGGATCAGGTGGCCGGACCTTGTAGTTCAAGTGTCGCTACACTTAGTTTCAATTTACGGAATTTTCCTCATAGTAACTAATGAAGTCAAACTTCTGACTACGTTGTTCGCTTTAGCCACCATTTACACGTCGGGATTTGGAATAACCGCGGGTGTACATAGACTGTGGTCACATAGAGCTTATAAGGCGCGAACGCCTTTACGAATACTGTTGGCTTTTCTCTTTACCATCACAGGACAGCGTGATATTTACACGTGGGCTTTGGACCATCGTGTTCATCATAAATATTCGGAGACGGTGGCAGACCCCCACGATGTCCGGCGAGGTTTCTGGTTTGCCCACGTGGGCTGGCTCGTCTTGACACCACATCCTGCAGTTGAAGATCGCAGGGTGGCTCTGAGGAAGTGTTCATTAGATCTAATAGAAGATCCCGTTGTTAGGATACAGCAGAAAATCTTCATTCCACTTTTTCTGCTGCTGAATATCCTCATCCCAATCTGGATACCATGGTACTTTTGGAATGAAAGCCTGGTGACGAGTTTCGTTATTAGTTTTGTTCTTCGATTCACGACCACTTTGAATATCGCCTTCTCCGTGAACAGCTTTGCGCATCTATGGGGAAACAAACCGTATGACAGGTTTATAAAACCAGCAGAAAACAGTGTAGTGAGCCTTGCAGCACTCGGAGAAGGCTGGCACAACTACCATCACGTGTTTCCGTGGGACTACAGAACCTCAGAACTTGGAAGAATAAATGTTTCCACGAATTTCATTGATTTCTTCGCTAAAATCGGATGGGCTTATGATCTTAAAGCGGCCACATCGTCGATGATTGAAAATCGAGCTAAGAGGAGCGGTGATGGCACTTTAGGCGAATCGGAAGAACCCGAAACTAATTCAAAACAACATTTTGACTAA

Protein

MAPAQQNIEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDISKYEAMEFTPRIRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAYKARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYSETVADPHDVRRGFWFAHVGWLVLTPHPAVEDRRVALRKCSLDLIEDPVVRIQQKIFIPLFLLLNILIPIWIPWYFWNESLVTSFVISFVLRFTTTLNIAFSVNSFAHLWGNKPYDRFIKPAENSVVSLAALGEGWHNYHHVFPWDYRTSELGRINVSTNFIDFFAKIGWAYDLKAATSSMIENRAKRSGDGTLGESEEPETNSKQHFD

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JM59   A0A0P0ES13   Q6US80   A0A1V0M872   A0A0U2F3C7   A0A0U2F3B7   + More
T1RTD9   A0A2A4JDC8   A0A291P0X0   A0A194R853   A0A076FRJ5   T1RTF8   A0A068FML2   A0A194PNH7   A0A0M3LAS8   A0A2A4JCW3   A0A0N1IEK7   A0A212F0N8   A0A1W4X4Z8   D7EJN0   N6T7V1   U4UEC1   V5GV58   A0A1Y1MPN0   A0A026W7K5   A0A1B6G1D1   A0A0L7RGW3   E2C1U1   T1RLC4   T1RLH5   A0A158NYS9   A0A0K8TPL9   A0A0A9YG42   A0A2J7PNG8   A0A154PDB8   A0A1B6CF47   A0A1B6IZF4   A0A0C9RKR6   F4W5A7   A0A3L8DX70   A0A195CW88   A0A195BVA3   A0A069DSQ1   T1RLH0   A0A151JS47   A0A023F6L0   A0A1L8DY69   A0A0J7KKN4   A0A0V0G6I4   A0A1L8DYH8   A0A224XFP8   A0A2A3EBL4   A0A088A9X9   V9IES8   A0A0P4VRY0   A0A151X3D3   A0A067QVK1   T1I0V7   A0A2M4AT57   A0A2M3Z4R1   A0A2M4AHE2   A0A2M4AK10   A0A2M4AHS0   Q17EY3   A0A2M3Z4F1   A0A182WRF9   A0A1S4F595   A0A2M4AKQ4   A0A182URP1   A0A182UGF6   A0A2M4BRM4   Q7QDC3   A0A182HUC1   A0A2M4BQR8   A0A182W0A2   A0A1Q3FPV1   A0A1L8EA80   B0X4F5   A0A2M4BPJ9   A0A195FTS2   A0A2M4CP39   A0A0A1XCP1   A0A1L8EJ67   A0A1L8EJB3   E2AX11   A0A1L8EIZ4   A0A2M4BPK3   A0A1L8EJ31   A0A182LFP3   A0A1L8EJ74   A0A034V870   A0A182Q571   A0A182N6J3   A0A182GY26   A0A023ERD9   A0A1L8EIX2   W5J4E8   A0A182PAC9   W8B475   A0A1J1I4U0  

Pubmed

19121390    24500170    26445454    15544945    28349297    28986331    + More
26354079    24817326    26385554    22118469    18362917    19820115    24880119    23537049    28004739    24508170    20798317    23727612    21347285    26369729    25401762    21719571    30249741    26334808    25474469    27129103    24845553    17510324    12364791    14747013    17210077    25830018    20966253    25348373    26483478    24945155    20920257    23761445    24495485   

EMBL

BABH01033475    JX531669    AGO45854.1    KT261686    ALJ30226.1    AY362880    + More
AAQ74260.1    KU755468    ARD71178.1    KP008125    AKU76412.1    KP008118    MF687525    AKU76405.1    ATJ44451.1    JX531657    AGO45842.1    NWSH01001917    PCG69688.1    MF687583    ATJ44509.1    KQ460845    KPJ12046.1    KF960743    AII21945.1    JX531663    AGO45848.1    KJ622048    AID66656.1    KQ459603    KPI92675.1    KM366793    AIM40223.1    PCG69689.1    KQ458438    KPJ05898.1    AGBW02011048    OWR47309.1    KF576673    DS497710    AHH30814.1    EFA12797.1    APGK01048732    APGK01048733    KB741125    ENN73778.1    KB632123    ERL88936.1    GALX01002909    JAB65557.1    GEZM01025018    JAV87643.1    KK107419    EZA51019.1    GECZ01013539    JAS56230.1    KQ414596    KOC69926.1    GL452008    EFN78053.1    KC437326    AGK82076.1    KC437328    AGK82078.1    ADTU01004251    ADTU01004252    GDAI01001517    JAI16086.1    GBHO01011562    GBHO01011560    JAG32042.1    JAG32044.1    NEVH01023953    PNF17875.1    KQ434878    KZC09842.1    GEDC01025280    JAS12018.1    GECU01015378    JAS92328.1    GBYB01007506    JAG77273.1    GL887645    EGI70557.1    QOIP01000003    RLU25070.1    KQ977220    KYN04895.1    KQ976407    KYM91398.1    GBGD01002187    JAC86702.1    KC437327    AGK82077.1    KQ978543    KYN30208.1    GBBI01001726    JAC16986.1    GFDF01002691    JAV11393.1    LBMM01006220    KMQ90794.1    GECL01002433    JAP03691.1    GFDF01002692    JAV11392.1    GFTR01005120    JAW11306.1    KZ288292    PBC29127.1    JR040511    JR040512    AEY59161.1    AEY59162.1    GDKW01002766    JAI53829.1    KQ982566    KYQ54760.1    KK853200    KDR09931.1    ACPB03020381    ACPB03020382    ACPB03020383    GGFK01010648    MBW43969.1    GGFM01002687    MBW23438.1    GGFK01006888    MBW40209.1    GGFK01007790    MBW41111.1    GGFK01007000    MBW40321.1    CH477278    EAT45076.1    GGFM01002622    MBW23373.1    GGFK01008048    MBW41369.1    GGFJ01006287    MBW55428.1    AAAB01008859    EAA07863.3    APCN01000618    GGFJ01006285    MBW55426.1    GFDL01005415    JAV29630.1    GFDG01003283    JAV15516.1    DS232338    EDS40308.1    GGFJ01005865    MBW55006.1    KQ981276    KYN43682.1    GGFL01002500    MBW66678.1    GBXI01006064    JAD08228.1    GFDG01000104    JAV18695.1    GFDG01000106    JAV18693.1    GL443495    EFN62031.1    GFDG01000107    JAV18692.1    GGFJ01005866    MBW55007.1    GFDG01000108    JAV18691.1    GFDG01000105    JAV18694.1    GAKP01020645    JAC38307.1    AXCN02000286    JXUM01096826    KQ564295    KXJ72474.1    GAPW01001865    JAC11733.1    GFDG01000109    JAV18690.1    ADMH02002143    ETN58288.1    GAMC01018499    JAB88056.1    CVRI01000039    CRK94612.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000192223    + More
UP000007266    UP000019118    UP000030742    UP000053097    UP000053825    UP000008237    UP000005205    UP000235965    UP000076502    UP000007755    UP000279307    UP000078542    UP000078540    UP000078492    UP000036403    UP000242457    UP000005203    UP000075809    UP000027135    UP000015103    UP000008820    UP000076407    UP000075903    UP000075902    UP000007062    UP000075840    UP000075920    UP000002320    UP000078541    UP000000311    UP000075882    UP000075886    UP000075884    UP000069940    UP000249989    UP000000673    UP000075885    UP000183832   

PRIDE

H9JM59   

Pfam

PF00487   FA_desaturase        + More
PF00085   Thioredoxin

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       
IPR001522   FADS-1_CS       
IPR036249   Thioredoxin-like_sf       
IPR013766   Thioredoxin_domain       

SUPFAM

SSF52833   SSF52833       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JM59   A0A0P0ES13   Q6US80   A0A1V0M872   A0A0U2F3C7   A0A0U2F3B7   + More
T1RTD9   A0A2A4JDC8   A0A291P0X0   A0A194R853   A0A076FRJ5   T1RTF8   A0A068FML2   A0A194PNH7   A0A0M3LAS8   A0A2A4JCW3   A0A0N1IEK7   A0A212F0N8   A0A1W4X4Z8   D7EJN0   N6T7V1   U4UEC1   V5GV58   A0A1Y1MPN0   A0A026W7K5   A0A1B6G1D1   A0A0L7RGW3   E2C1U1   T1RLC4   T1RLH5   A0A158NYS9   A0A0K8TPL9   A0A0A9YG42   A0A2J7PNG8   A0A154PDB8   A0A1B6CF47   A0A1B6IZF4   A0A0C9RKR6   F4W5A7   A0A3L8DX70   A0A195CW88   A0A195BVA3   A0A069DSQ1   T1RLH0   A0A151JS47   A0A023F6L0   A0A1L8DY69   A0A0J7KKN4   A0A0V0G6I4   A0A1L8DYH8   A0A224XFP8   A0A2A3EBL4   A0A088A9X9   V9IES8   A0A0P4VRY0   A0A151X3D3   A0A067QVK1   T1I0V7   A0A2M4AT57   A0A2M3Z4R1   A0A2M4AHE2   A0A2M4AK10   A0A2M4AHS0   Q17EY3   A0A2M3Z4F1   A0A182WRF9   A0A1S4F595   A0A2M4AKQ4   A0A182URP1   A0A182UGF6   A0A2M4BRM4   Q7QDC3   A0A182HUC1   A0A2M4BQR8   A0A182W0A2   A0A1Q3FPV1   A0A1L8EA80   B0X4F5   A0A2M4BPJ9   A0A195FTS2   A0A2M4CP39   A0A0A1XCP1   A0A1L8EJ67   A0A1L8EJB3   E2AX11   A0A1L8EIZ4   A0A2M4BPK3   A0A1L8EJ31   A0A182LFP3   A0A1L8EJ74   A0A034V870   A0A182Q571   A0A182N6J3   A0A182GY26   A0A023ERD9   A0A1L8EIX2   W5J4E8   A0A182PAC9   W8B475   A0A1J1I4U0  

PDB

4YMK     E-value=9.08865e-70,     Score=669

KEGG

101736567    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) BmorKPAE; stearoyl-CoA

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0006633   GO:0016717   GO:0016021   GO:0005789   GO:0005506   GO:0006636   GO:0016491   GO:0005623   GO:0045454   GO:0006629   GO:0001607   GO:0005852   GO:0006446   GO:0043022   GO:0005488   GO:0003707   GO:0051537   GO:0055114  

PANTHER

PTHR11351  

Length:

376

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.9082800000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.95602

inside

1  -  77

TMhelix

78  -  97

outside

98  -  101

TMhelix

102  -  124

inside

125  -  222

TMhelix

223  -  245

outside

246  -  254

TMhelix

255  -  277

inside

278  -  376

 

 

Pi

17.916377

Theta

15.782946

Tajima's D

0.093093

CLR

11.721123

CSRT

0.402229888505575

Interpretation

Uncertain