Gene

KWMTBOMO07350

Pre Gene Modal

BGIBMGA010612

Annotation

diapause_hormone_receptor-1_[Bombyx_mori]

Location

Bomo_Chr12(-):10918068-10922527      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.966

CDS

ATGAACTCAGAAACAATAAACGACACCGCAAATGCTTCGAGACCTGTAGACTCTACTCGTGTTTTTGGCCCTCAAAGAGATACACTGTATATAGTACTGCCTATTACAATTATCTATACATTTATATTTGTATCAGGGTTATTGGGTAACATATTCACGTGTATCGTAATTGTACGCAATAAAAATTTGCATACTGCCACCAATTATTACTTGTTCAGTTTGGCGATTTCGGATCTCTTATTATTAGTGAGTGGAATGCCACAAGAAATGTATTCTATATGGTCCAAGTGGCCATATGTCTTTGGGCACACATTCTGCGTCATCAGAGGCCTGGCTGCTGAAACTTCGACTAACGCTAGCGTCTTAACGATAACATTATTCACGATCGAGAGATACCTAGCTATATGCCATCCATTTGTTTCACATAAGATGTCAAAACTTTCCCGGGCAGTGAAACATGTAGTTTTATTGTGGGTCGCAGCCCTTGCGCTAGCATTACCGCAGGCTCTTCAATTTGGAATACGCCAATACCAAGGTGTGATCATGTGTCTACAAACCCGTGTTATAATTGAACACTCTTTCGAAATCTCGACATTTCTCTTTTTCTTAGCGCCAATGGTTTTAATCACGGTGCTTTATTCATTTATTGGACTAAAACTCAGAGAAAAAAGTAATGTGAAAGAACAAAATCAGAATGATTTTGAATCAAGTATTAGGTATAGTCACAAGATGTGTCGGAAGCCAAGTCAATCAACGCGGAGAGTCATCAAAATGTTGGTGGCAGTGGTCGTCGCTTTTTTCATCTGTTGGGCTCCTTTCCACGCGCAACGTCTTGTCGCTATCTACGGCACCAACGAAAATCACCTCGCAAAATCCCCGATCCTGTTCTCAGTATACTTGTTCTTGACTTACATCTCCGGAATCTTCTACTACATGTCGACGTGCATCAATCCTATCTTGTACCACATCATGTCGAACAAATTCAGAGATGCTTTCAAGATGACCCTGTGCTGCTGCGGGACGCGCAATGATACCGCCGTCAAGCGCTCTTCGTACACGGCCATGGCATTCGTGCGGCATCCGACGTCCAGCGGCACTTCCAATTCAGGCAACTCGATCAGAAACGAGACTAACCTTCAATCCAAGACAAGAAGAACCAACAGTAGAGATAAAATCCTCAATGGCGCTCACGTGTGCGGTAATGGAACCCTGTCAAGCACGACCGTCGCCAAACCAGACAGCCGAACCAACGGAGATCGCCTCTTAGATAGAAACCTCATCAATGAAACATACTTCAACACGAACTGTTAA

Protein

MNSETINDTANASRPVDSTRVFGPQRDTLYIVLPITIIYTFIFVSGLLGNIFTCIVIVRNKNLHTATNYYLFSLAISDLLLLVSGMPQEMYSIWSKWPYVFGHTFCVIRGLAAETSTNASVLTITLFTIERYLAICHPFVSHKMSKLSRAVKHVVLLWVAALALALPQALQFGIRQYQGVIMCLQTRVIIEHSFEISTFLFFLAPMVLITVLYSFIGLKLREKSNVKEQNQNDFESSIRYSHKMCRKPSQSTRRVIKMLVAVVVAFFICWAPFHAQRLVAIYGTNENHLAKSPILFSVYLFLTYISGIFYYMSTCINPILYHIMSNKFRDAFKMTLCCCGTRNDTAVKRSSYTAMAFVRHPTSSGTSNSGNSIRNETNLQSKTRRTNSRDKILNGAHVCGNGTLSSTTVAKPDSRTNGDRLLDRNLINETYFNTNC

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

Q1MXD2   A0A161I3S7   V9QPA3   S5LVZ5   A0PC00   R4L6N3   + More
A0A0S1YDN7   A0A3S2P557   A0A182QPY3   A0A084VAB3   A0A182W5Y9   A0A182MZU4   A0A182MG56   A0A182FJV1   W5JN91   A0A182I9Y5   Q3YL79   A7XII4   A0A182LD30   A0A182X7F4   A0A182RPJ3   A0A182H311   A0A1B0CG71   Q7RTK4   B1Q2A1   Q16L21   A0A1S4FXM4   A0A0P6J0T1   A0A336LQE0   A0A182YH31   A0A154P9V8   C6YBD0   A0A2A3EU95   A0A1B6K5I7   A0A336LAP1   E0VU51   A0A0M8ZWM1   I7CEJ1   A0A182PX79   E2BCE7   A0A310SF16   A0A195CMY0   A0A195DRH0   A0A195B9I0   I7DLN5   I7DBT2   K7ITX6   A0A195FD90   A0A158NC00   A0A026W3I9   A0A0C9QDT4   A0A0L7RBY5   A0A1B6CAS5   A0A067RTM0   A0A2U9PFV2   U3U4G2   A0A3Q0IYM5   A0A0M4F318   A0A0C9RY41   A1A686   A1BXU1   E2AX14   A0A154PD71   L0APC6   A0A026W4S0   K7J0U7   A0A0J7KY79   E0VE49   A0A0L7RGI4   A0A195BTH3   A0A158NYT3   A0A195FUY4   F4W5B1   A0A194R2M0   A0A195CW36   A0A151JSI6   A0A1W4WS47   A0A151X3C0   A0A2S2RBD1   A0A194PH11   A0A067RHU8   A0A2P8Y0V3   D6X3Y2   A0A2J7PNJ6   A0A1Y1KZF9   A0A023F658   D6X3X9   A0A2P8Y0V2   A0A0A7H8P0   N1NV77   A0A1J1I979   A0A1B6C1B0   D6X3Y3  

Pubmed

16600181    23551811    24438588    20920257    23761445    16054112    + More
17709098    20966253    26483478    12951076    12364791    17510324    26999592    25244985    20566863    22820129    20798317    20075255    21347285    24508170    30249741    24845553    23932938    17070981    21719571    26354079    29403074    18362917    19820115    28004739    25474469    25348027    18054377    18025266    18316733    20068045    21843505    23604020   

EMBL

KP228012    AB164386    AB164387    AKD28016.1    BAE93495.1    BAE93496.1    + More
KT285612    ANB78221.1    KF700367    AHC32217.1    KC182787    AGR34305.1    AB283041    BAF36977.1    JX500424    AGL12069.1    KT031036    ALM88334.1    RSAL01000020    RVE52657.1    AXCN02002524    ATLV01003054    KE524109    KFB34907.1    AXCM01000712    AXCM01000713    ADMH02000618    ETN65601.1    APCN01001075    DQ103706    AAZ43087.1    AY900218    AAX84797.1    JXUM01106423    JXUM01106424    KQ565054    KXJ71406.1    AJWK01010799    BK001383    DAA01375.1    AAAB01008847    EAA06972.3    CH477926    EAT35008.2    GDUN01000345    JAN95574.1    UFQT01000110    SSX20160.1    KQ434839    KZC07970.1    DQ869052    ABJ09599.1    KZ288186    PBC34776.1    GECU01000980    JAT06727.1    UFQS01001440    UFQT01001440    SSX10908.1    SSX30586.1    DS235780    EEB16907.1    KQ435847    KOX71113.1    JQ686084    AFO73269.1    GL447257    EFN86683.1    KQ769179    OAD52895.1    KQ977574    KYN01822.1    KQ980581    KYN15463.1    KQ976540    KYM81188.1    JQ686085    AFO73270.1    JQ686086    AFO73271.1    KQ981673    KYN38172.1    ADTU01010996    ADTU01010997    ADTU01010998    ADTU01010999    ADTU01011000    KK107453    QOIP01000004    EZA50650.1    RLU23480.1    GBYB01012593    JAG82360.1    KQ414616    KOC68482.1    GEDC01026711    JAS10587.1    KK852425    KDR24150.1    MG550218    AWT50652.1    AB817319    BAO01086.1    CP012526    ALC45557.1    GBYB01012826    JAG82593.1    BK005718    DAA05842.1    DQ869051    ABJ09598.1    GL443495    EFN62034.1    KQ434878    KZC09845.1    JX657040    AFZ77039.1    KK107419    QOIP01000003    EZA51023.1    RLU25067.1    LBMM01001947    KMQ95497.1    DS235088    EEB11655.1    KQ414596    KOC69923.1    KQ976407    KYM91401.1    ADTU01004262    ADTU01004263    ADTU01004264    KQ981276    KYN43679.1    GL887645    EGI70561.1    KQ460845    KPJ12038.1    KQ977220    KYN04891.1    KQ978543    KYN30205.1    KQ982566    KYQ54764.1    GGMS01017489    MBY86692.1    KQ459603    KPI92686.1    KK852625    KDR19918.1    PYGN01001067    PSN37892.1    KQ971379    EEZ97729.2    NEVH01023953    PNF17913.1    GEZM01068835    JAV66744.1    GBBI01002018    JAC16694.1    KJ435305    AIZ00520.1    EEZ97728.2    PSN37891.1    KJ435304    AIZ00519.1    BK006100    DAA64481.1    CVRI01000040    CRK94985.1    GEDC01030144    JAS07154.1    KF768342    KJ435303    AIL02854.1    AIZ00518.1    EEZ97715.2   

Proteomes

UP000283053    UP000075886    UP000030765    UP000075920    UP000075884    UP000075883    + More
UP000069272    UP000000673    UP000075840    UP000075882    UP000076407    UP000075900    UP000069940    UP000249989    UP000092461    UP000007062    UP000008820    UP000076408    UP000076502    UP000005203    UP000242457    UP000009046    UP000053105    UP000075885    UP000008237    UP000078542    UP000078492    UP000078540    UP000002358    UP000078541    UP000005205    UP000053097    UP000279307    UP000053825    UP000027135    UP000079169    UP000092553    UP000000311    UP000036403    UP000007755    UP000053240    UP000192223    UP000075809    UP000053268    UP000245037    UP000007266    UP000235965    UP000183832   

PRIDE

Q1MXD2   

Pfam

PF00001   7tm_1        + More
PF15393   DUF4615

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR005390   NeuromedU_rcpt       
IPR029274   DUF4615       

ProteinModelPortal

Q1MXD2   A0A161I3S7   V9QPA3   S5LVZ5   A0PC00   R4L6N3   + More
A0A0S1YDN7   A0A3S2P557   A0A182QPY3   A0A084VAB3   A0A182W5Y9   A0A182MZU4   A0A182MG56   A0A182FJV1   W5JN91   A0A182I9Y5   Q3YL79   A7XII4   A0A182LD30   A0A182X7F4   A0A182RPJ3   A0A182H311   A0A1B0CG71   Q7RTK4   B1Q2A1   Q16L21   A0A1S4FXM4   A0A0P6J0T1   A0A336LQE0   A0A182YH31   A0A154P9V8   C6YBD0   A0A2A3EU95   A0A1B6K5I7   A0A336LAP1   E0VU51   A0A0M8ZWM1   I7CEJ1   A0A182PX79   E2BCE7   A0A310SF16   A0A195CMY0   A0A195DRH0   A0A195B9I0   I7DLN5   I7DBT2   K7ITX6   A0A195FD90   A0A158NC00   A0A026W3I9   A0A0C9QDT4   A0A0L7RBY5   A0A1B6CAS5   A0A067RTM0   A0A2U9PFV2   U3U4G2   A0A3Q0IYM5   A0A0M4F318   A0A0C9RY41   A1A686   A1BXU1   E2AX14   A0A154PD71   L0APC6   A0A026W4S0   K7J0U7   A0A0J7KY79   E0VE49   A0A0L7RGI4   A0A195BTH3   A0A158NYT3   A0A195FUY4   F4W5B1   A0A194R2M0   A0A195CW36   A0A151JSI6   A0A1W4WS47   A0A151X3C0   A0A2S2RBD1   A0A194PH11   A0A067RHU8   A0A2P8Y0V3   D6X3Y2   A0A2J7PNJ6   A0A1Y1KZF9   A0A023F658   D6X3X9   A0A2P8Y0V2   A0A0A7H8P0   N1NV77   A0A1J1I979   A0A1B6C1B0   D6X3Y3  

PDB

4XEE     E-value=2.1551e-31,     Score=339

KEGG

692457    K05052 neuromedin U receptor 1 | (RefSeq) Dhr-1, BmDHR-1, DHR; diapause hormone receptor-1

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0001607   GO:0004930   GO:0050254   GO:0007218   GO:0007186   GO:0005852   GO:0006446   GO:0043022   GO:0005488   GO:0003707   GO:0051537  

Length:

436

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

151.42344

Exp number, first 60 AAs:

23.44477

Total prob of N-in:

0.05644

POSSIBLE N-term signal

sequence

outside

1  -  29

TMhelix

30  -  52

inside

53  -  64

TMhelix

65  -  87

outside

88  -  106

TMhelix

107  -  129

inside

130  -  149

TMhelix

150  -  172

outside

173  -  195

TMhelix

196  -  218

inside

219  -  258

TMhelix

259  -  281

outside

282  -  300

TMhelix

301  -  323

inside

324  -  436

 

 

Pi

15.421239

Theta

17.020062

Tajima's D

-0.954419

CLR

0.397505

CSRT

0.145492725363732

Interpretation

Uncertain