Gene

KWMTBOMO07348

Annotation

PREDICTED:_uncharacterized_protein_LOC101736438_[Bombyx_mori]

Location

Bomo_Chr12(+):10893698-10895238      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.321 PlasmaMembrane   Reliability : 1.738

CDS

ATGATCAACAAACAGGTATCACTGAGCCAAGCCCGCGGTCGTTGCGCCATCCGTGAGCTGCCAGTCTACACAACCAGAGCTAGTCTCGCGTTCCCTTTACCCCAATATTCGCCTTATGCTAGACTGACTTTAGTAAGTCTTCTTCAGCTTCGTAGCGGAGGAATCTTGGCTCGGTTAGAAGCTGCATTAGTTCCTGAAATGCCACAGTGTACGTTGCCAGCAGGATTTGCTTCAGCTCGTGCCATTGATGTGCGATCAGCTCTAATTTTACTGGCATGTGGACTTGTTACAGCAGCGTTTATGGGTGTAGCAGAATACTCTTGGAAGAATCGACAACAGCAAATAAAGTTACTGCATAAATGGTACAAGAGATTTTTAAATTTCTTTTTCAGTTCCAATAATTGA

Protein

MINKQVSLSQARGRCAIRELPVYTTRASLAFPLPQYSPYARLTLVSLLQLRSGGILARLEAALVPEMPQCTLPAGFASARAIDVRSALILLACGLVTAAFMGVAEYSWKNRQQQIKLLHKWYKRFLNFFFSSNN

Similarity

Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.

Uniprot

A0A2A4JI15   A0A0L7L1P0   A0A194R486   A0A194PH89   A0A2P8XBB2   A0A3L9LY13   + More
A0A2J7Q441   A0A067R2G8   A0A154PD52   A0A3L8DWR2   A0A026W4K6   A0A2A3EBR3   A0A151X3A7   F4W599   E9IYQ1   A0A088AT59   A0A151JS81   A0A195CW46   A0A158NYS3   A0A195FTE4   A0A195BTG3   E2C645   E2AX05   A0A2H4ZBD6   A0A232EKP5   K7JKS9   A0A139W9V1   U4UI30   N6U672   A0A182N505   B0WNS7   A0A2P8YE68   A0A182FCW1   A0A3L8E073   A0A0M4JME2   A0A0D3QDF2   A0A0D3QCU1   A0A0D3QD70   A0A195E4V3   A0A2P8XRF2   A0A182JLV9  

Pubmed

26227816    26354079    29403074    24845553    30249741    24508170    + More
21719571    21282665    21347285    20798317    29133804    28648823    20075255    18362917    19820115    23537049    26265180    25552603   

EMBL

NWSH01001345    PCG71601.1    JTDY01003526    KOB69402.1    KQ460845    KPJ12050.1    + More
KQ459603    KPI92672.1    PYGN01004628    PSN29282.1    KB465724    RLZ02168.1    NEVH01018390    PNF23358.1    KK852751    KDR17116.1    KQ434878    KZC09836.1    QOIP01000003    RLU24881.1    KK107419    EZA51015.1    KZ288292    PBC29130.1    KQ982566    KYQ54754.1    GL887645    EGI70549.1    GL767043    EFZ14279.1    KQ978543    KYN30217.1    KQ977220    KYN04901.1    ADTU01004236    KQ981276    KYN43691.1    KQ976407    KYM91391.1    GL452916    EFN76588.1    GL443495    EFN62025.1    MF975492    AUF73068.1    NNAY01003731    OXU18934.1    KQ971905    KYB24694.1    KB631510    KB632172    KI210514    ERL84328.1    ERL89540.1    ERL96291.1    APGK01038137    KB740953    ENN77120.1    DS232014    EDS31918.1    PYGN01000667    PSN42552.1    QOIP01000002    RLU26111.1    KP843225    ALD51361.1    KP274488    AJC98634.1    KP274486    AJC98632.1    KP274474    AJC98620.1    KQ979657    KYN19932.1    PYGN01001480    PSN34586.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000053268    UP000245037    UP000235965    + More
UP000027135    UP000076502    UP000279307    UP000053097    UP000242457    UP000075809    UP000007755    UP000005203    UP000078492    UP000078542    UP000005205    UP000078541    UP000078540    UP000008237    UP000000311    UP000215335    UP000002358    UP000007266    UP000030742    UP000019118    UP000075884    UP000002320    UP000069272    UP000075880   

Pfam

PF00060   Lig_chan        + More
PF10613   Lig_chan-Glu_bd
PF00497   SBP_bac_3

Interpro

IPR001320   Iontro_rcpt        + More
IPR019594   Glu/Gly-bd       
IPR001638   Solute-binding_3/MltF_N       

ProteinModelPortal

A0A2A4JI15   A0A0L7L1P0   A0A194R486   A0A194PH89   A0A2P8XBB2   A0A3L9LY13   + More
A0A2J7Q441   A0A067R2G8   A0A154PD52   A0A3L8DWR2   A0A026W4K6   A0A2A3EBR3   A0A151X3A7   F4W599   E9IYQ1   A0A088AT59   A0A151JS81   A0A195CW46   A0A158NYS3   A0A195FTE4   A0A195BTG3   E2C645   E2AX05   A0A2H4ZBD6   A0A232EKP5   K7JKS9   A0A139W9V1   U4UI30   N6U672   A0A182N505   B0WNS7   A0A2P8YE68   A0A182FCW1   A0A3L8E073   A0A0M4JME2   A0A0D3QDF2   A0A0D3QCU1   A0A0D3QD70   A0A195E4V3   A0A2P8XRF2   A0A182JLV9  

KEGG

101736438    no KO assigned | (RefSeq) uncharacterized LOC101736438

GO

GO:0016021   GO:0004970   GO:0016020   GO:0004971   GO:0032281   GO:0005886  

Length:

134

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.42328

Exp number, first 60 AAs:

0.17555

Total prob of N-in:

0.68119

inside

1  -  85

TMhelix

86  -  108

outside

109  -  134

 

 

Pi

35.245873

Theta

31.291361

Tajima's D

0.490429

CLR

0.010057

CSRT

0.514524273786311

Interpretation

Uncertain