Gene

KWMTBOMO07344

Pre Gene Modal

BGIBMGA010614

Annotation

acyl-CoA_desaturase_3_[Helicoverpa_assulta]

Location

Bomo_Chr12(-):10875829-10878517      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.728

CDS

ATGGCACCTTTAAATATTGTGGATACACCGTACAGCGATCTAACAAAACTAGAAGACAGCATCGAAAACAAACCGAACAATCAAGCAAACAAACCTAATAACTTCGAAAAAACTAATACAGTTGATCCGTATGACGAAGTCAAACTTAATGAACCAATTTTCTTGGCTCCTATACGTAAATGGGAAAAAAGAATGGGTTTCGTGACACCCATAAGATGGACGAACGCTATTCTTATAACAACATTCCATGTGGTCACAGTTGTTTGGGGTTTTTACACATTATTTTATGAAAAGCAAAAACCAATGTGGCAATCTGTTATATTTGGAATATTCATGGGACAGCTAGCAGGCTTTGGAGTGACAGCAGGCGCACATCGATACTGGTGCCATCGGTCATACAAAGCGAAACTACCATTGCAATTAATTTTGGCACTCTGCTACTCAGCAGCTGGACAAAATACAATCTACGAATGGGTTCGAGATCATCGTGTGCACCACAAATTCTCGGAAACCTCGGCCGACCCACATGATGCCAATCGTGGCTTTTTTTTCTCACATATCGGATGGCTTATGATGAAAAAACACCCAGACGTAGTGAAGCAGGGGTCCAAAATTGACATGAGTGACATCATCCACGACCCTGTTGTGATTTTCTGCACCAAATACTTCATTTTGTTCAAAATAACATTCTGTTGGATAATACCATCGGCGCTTCCTGTCTACGCTTGGGGCGAATTGTGGAATATCGCCATTCTCTCCCAAGCATTCTGGAGATATATGCTCAGCTTGCACTTCACTTGGTCTGTCAATAGTTTTGCGCATCTATGGGGGAACAAACCTTACGATAGGTACATAATGCCGTGTGAAAACAAAGGAGTCTCTATTGTTGCAATGGGCGAGGGTTGGCATAATTACCACCACACTTTCCCTTGGGACTATAAAGCCGCTGAATTGGGTGTCCCAAACAATACCACAACTTTCTTACTAGATCTGTTCGCTAGAATAGGTTGGGCATATGACTTAAAACAAGCATCGCCAGCATTAGTCCGAGCTGTTGCTAAGCAGAGGGGAGAATGCAAGGAATGA

Protein

MAPLNIVDTPYSDLTKLEDSIENKPNNQANKPNNFEKTNTVDPYDEVKLNEPIFLAPIRKWEKRMGFVTPIRWTNAILITTFHVVTVVWGFYTLFYEKQKPMWQSVIFGIFMGQLAGFGVTAGAHRYWCHRSYKAKLPLQLILALCYSAAGQNTIYEWVRDHRVHHKFSETSADPHDANRGFFFSHIGWLMMKKHPDVVKQGSKIDMSDIIHDPVVIFCTKYFILFKITFCWIIPSALPVYAWGELWNIAILSQAFWRYMLSLHFTWSVNSFAHLWGNKPYDRYIMPCENKGVSIVAMGEGWHNYHHTFPWDYKAAELGVPNNTTTFLLDLFARIGWAYDLKQASPALVRAVAKQRGECKE

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

H9JM62   A0A0U2F3E7   A0A291P0T4   A0A291P0N7   A0A0U2F3E5   A0A2A4J0H0   + More
A0A2H1VNN0   A0A194R858   A0A194PGZ7   A0A1L8D6C8   S4P7A1   A0A1L8D6I7   A0A2H4WB82   A0A2H4WB77   A0A1B6EKR5   A0A1B0CEY1   A0A212EQ61   A0A1B6IH88   A0A0P6IHM7   B4NGT2   B4K9T3   A0A3B0KVP4   A0A034VQK3   A0A1S4F557   Q17EY7   A0A0L0BZP6   A0A0K8U130   B4GNP6   Q29C24   A0A182JFM4   A0A1A9WN17   A0A1B6MMW0   A0A084W6J5   A0A1S4F5C8   W8B9K3   A0A1W4VQC5   F5HK92   A0A182JYF7   A0A3S2NP26   A0A1A9ZF92   B4M6D6   B4JEM7   D3TN52   A0A1J1HM95   A0A1B0GE34   K7IYW5   Q9VA94   A0A1B6DCJ1   B4R1J8   B3LZD2   A0A182H3A8   A0A0A1X4V7   A0A1Q3F6G7   B4PLU0   V5REH3   A0A182PAC5   V5RGA3   B0X4F3   V5RE74   A0A2J7Q486   A0A182HUB7   A0A0M4ES70   A0A182WRG3   A0A182Y4E3   J9KA67   A0A182M1I7   A0A182RNM7   A0A2P8ZFC0   A0A182LFP2   A0A182QM12   A0A182N6I9   A0A182W098   W5J5Z7   B4HZN5   A0A182M1I4   E0VE41   A0A182FAQ3   A0A1Y1MK99   A0A182KA51   E2C646   A0A1A9XNV7   A0A067QIN8   B3P7X0   W5J374   A0A232EJP1   F5HK94   A0A182HUB6   A0A1I8PAY4   A0A232EV90   A0A182JI20   A0A084W6J6   D7EIY5   K7IML3   A0A1W4WVL1   E2AX06   A0A1I8N2Y4  

Pubmed

19121390    28986331    26354079    23622113    22118469    17994087    + More
25348373    17510324    26108605    15632085    24438588    24495485    12364791    14747013    17210077    20353571    20075255    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    25830018    17550304    24408442    25244985    29403074    20966253    20920257    23761445    20566863    28004739    20798317    24845553    28648823    18362917    19820115    25315136   

EMBL

BABH01033466    KP008122    AKU76409.1    MF687585    ATJ44511.1    MF687523    + More
ATJ44449.1    KP008115    AKU76402.1    NWSH01004597    PCG64873.1    ODYU01003524    SOQ42423.1    KQ460845    KPJ12051.1    KQ459603    KPI92671.1    GEYN01000128    JAV02001.1    GAIX01007792    JAA84768.1    GEYN01000124    JAV02005.1    KY172015    MG585939    AUC64291.1    AYE54243.1    KY172016    AUC64292.1    GECZ01031245    JAS38524.1    AJWK01009460    AJWK01009461    AGBW02013325    OWR43604.1    GECU01021427    GECU01014371    GECU01009143    JAS86279.1    JAS93335.1    JAS98563.1    GDIQ01004277    JAN90460.1    CH964272    EDW84429.1    CH933806    EDW14558.1    OUUW01000041    SPP89936.1    GAKP01015109    JAC43843.1    CH477278    EAT45071.1    JRES01001112    KNC25461.1    GDHF01034036    GDHF01031892    GDHF01023085    JAI18278.1    JAI20422.1    JAI29229.1    CH479186    EDW39372.1    CM000070    EAL26822.2    GEBQ01002690    JAT37287.1    ATLV01020821    KE525308    KFB45839.1    GAMC01011209    GAMC01011208    JAB95347.1    AAAB01008859    EAU77039.3    EGK96644.1    EGK96645.1    RSAL01000020    RVE52654.1    CH940652    EDW59212.1    CH916369    EDV93158.1    EZ422854    ADD19130.1    CVRI01000009    CRK88658.1    CCAG010012086    AE014297    AY047565    AAF57020.1    AAK77297.1    GEDC01030129    GEDC01013889    JAS07169.1    JAS23409.1    CM000364    EDX14986.1    CH902617    EDV44111.1    JXUM01107306    JXUM01107307    JXUM01107308    JXUM01107309    KQ565130    KXJ71303.1    GBXI01008396    GBXI01007656    JAD05896.1    JAD06636.1    GFDL01011942    JAV23103.1    CM000160    EDW99077.1    KF651144    AHB33599.1    KF651146    AHB33601.1    DS232338    EDS40306.1    KF651145    AHB33600.1    NEVH01018390    PNF23385.1    APCN01000618    CP012526    ALC47547.1    ABLF02025683    AXCM01001395    PYGN01000075    PSN55191.1    AXCN02000286    ADMH02002143    ETN58290.1    CH480819    EDW53492.1    DS235088    EEB11647.1    GEZM01029031    JAV86162.1    GL452916    EFN76589.1    KK853306    KDR08706.1    CH954182    EDV53097.1    ETN58291.1    NNAY01003989    OXU18528.1    EGK96646.1    NNAY01002028    OXU22271.1    KFB45840.1    KQ971905    EFA12412.2    GL443495    EFN62026.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000092461    UP000007151    + More
UP000007798    UP000009192    UP000268350    UP000008820    UP000037069    UP000008744    UP000001819    UP000075880    UP000091820    UP000030765    UP000192221    UP000007062    UP000075881    UP000283053    UP000092445    UP000008792    UP000001070    UP000183832    UP000092444    UP000002358    UP000000803    UP000000304    UP000007801    UP000069940    UP000249989    UP000002282    UP000075885    UP000002320    UP000235965    UP000075840    UP000092553    UP000076407    UP000076408    UP000007819    UP000075883    UP000075900    UP000245037    UP000075882    UP000075886    UP000075884    UP000075920    UP000000673    UP000001292    UP000009046    UP000069272    UP000008237    UP000092443    UP000027135    UP000008711    UP000215335    UP000095300    UP000007266    UP000192223    UP000000311    UP000095301   

PRIDE

H9JM62    Q9VA94   

Pfam

PF00487   FA_desaturase

Interpro

IPR015876   Acyl-CoA_DS        + More
IPR005804   FA_desaturase_dom       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

H9JM62   A0A0U2F3E7   A0A291P0T4   A0A291P0N7   A0A0U2F3E5   A0A2A4J0H0   + More
A0A2H1VNN0   A0A194R858   A0A194PGZ7   A0A1L8D6C8   S4P7A1   A0A1L8D6I7   A0A2H4WB82   A0A2H4WB77   A0A1B6EKR5   A0A1B0CEY1   A0A212EQ61   A0A1B6IH88   A0A0P6IHM7   B4NGT2   B4K9T3   A0A3B0KVP4   A0A034VQK3   A0A1S4F557   Q17EY7   A0A0L0BZP6   A0A0K8U130   B4GNP6   Q29C24   A0A182JFM4   A0A1A9WN17   A0A1B6MMW0   A0A084W6J5   A0A1S4F5C8   W8B9K3   A0A1W4VQC5   F5HK92   A0A182JYF7   A0A3S2NP26   A0A1A9ZF92   B4M6D6   B4JEM7   D3TN52   A0A1J1HM95   A0A1B0GE34   K7IYW5   Q9VA94   A0A1B6DCJ1   B4R1J8   B3LZD2   A0A182H3A8   A0A0A1X4V7   A0A1Q3F6G7   B4PLU0   V5REH3   A0A182PAC5   V5RGA3   B0X4F3   V5RE74   A0A2J7Q486   A0A182HUB7   A0A0M4ES70   A0A182WRG3   A0A182Y4E3   J9KA67   A0A182M1I7   A0A182RNM7   A0A2P8ZFC0   A0A182LFP2   A0A182QM12   A0A182N6I9   A0A182W098   W5J5Z7   B4HZN5   A0A182M1I4   E0VE41   A0A182FAQ3   A0A1Y1MK99   A0A182KA51   E2C646   A0A1A9XNV7   A0A067QIN8   B3P7X0   W5J374   A0A232EJP1   F5HK94   A0A182HUB6   A0A1I8PAY4   A0A232EV90   A0A182JI20   A0A084W6J6   D7EIY5   K7IML3   A0A1W4WVL1   E2AX06   A0A1I8N2Y4  

PDB

4YMK     E-value=1.57512e-73,     Score=702

KEGG

101743311    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) acyl-CoA Delta(11) des

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0016717   GO:0006633   GO:0004768   GO:0006636   GO:0005506   GO:0005789   GO:0016491   GO:0006629   GO:0005622   GO:0005737   GO:0005852   GO:0006446   GO:0043022   GO:0005488   GO:0003707   GO:0051537   GO:0055114  

PANTHER

PTHR11351  

Length:

361

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

88.42204

Exp number, first 60 AAs:

0

Total prob of N-in:

0.82918

inside

1  -  73

TMhelix

74  -  96

outside

97  -  105

TMhelix

106  -  128

inside

129  -  221

TMhelix

222  -  244

outside

245  -  253

TMhelix

254  -  276

inside

277  -  361

 

 

Pi

15.100059

Theta

16.741727

Tajima's D

-0.408794

CLR

0.601608

CSRT

0.270886455677216

Interpretation

Uncertain