SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07337
Annotation
PREDICTED:_histidine-rich_glycoprotein_[Athalia_rosae]
Location in the cell
Nuclear   Reliability : 2.622
 

Sequence

CDS
ATGAGGGCACTCATAGCTATAGGAGTGTTATGTTTGGTTGCTTTATGTGCCGGTGACGAGTCCAAGGATCAAGCCGTGGCGGCCAGTGGTCACCACCATGAGCATGGTGGTGGTCATGATCACCATGCGCATCACCATCACGACCATGGTGGTAAGGGCGGTAAAGGTCACAAAGGACATCACCATCACCACAAGGGCGATCACGGACACCATGGCAAGCATCATCATGAAGAACATCACCACGAACACGGAGGCGGGCACAAGAAACATTGGGATGAACATGACGACCATGGTGAACACCACGAGCATGGACATCACCACAAAGGCGGCAAGCATGGCCATCACGAACACCACGACAAAGGTGAACACACTGACGGCTACCACAAGAAGTACCACAAGGATCATTTCCACAAGGATCATCACTTCCATGACGGCCACCACGATGAAGGCAAGCACCACAAGCACGGACATCACCACAAACATCACGAAGACCACGGCGGCCACCACAAGAAAGGCGGTCATCATCACTCCGGCCACCATGACGATCATTACGGCAAAGGCGGACATCACGACAAGCACCATTATGATGAAGGACACCATGAGCACAAGGGTCACCATGGACATGAAGGTCATCATCATCATCATGGCGGTCATGGCAAGAAGGGAGGTCATGATGACCATAAAGACTGGGGATTCCACCATGGCAAACACTAA
Protein
MRALIAIGVLCLVALCAGDESKDQAVAASGHHHEHGGGHDHHAHHHHDHGGKGGKGHKGHHHHHKGDHGHHGKHHHEEHHHEHGGGHKKHWDEHDDHGEHHEHGHHHKGGKHGHHEHHDKGEHTDGYHKKYHKDHFHKDHHFHDGHHDEGKHHKHGHHHKHHEDHGGHHKKGGHHHSGHHDDHYGKGGHHDKHHYDEGHHEHKGHHGHEGHHHHHGGHGKKGGHDDHKDWGFHHGKH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998912
 
 
Length:
237
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01917
Exp number, first 60 AAs:
0.01917
Total prob of N-in:
0.02247
outside
1  -  237
 
 

Population Genetic Test Statistics

Pi
1.178904
Theta
4.381859
Tajima's D
-2.025107
CLR
47.866382
CSRT
0.00939953002349883
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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