SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07315
Pre Gene Modal
BGIBMGA010626
Annotation
PREDICTED:_exocyst_complex_component_3_[Bombyx_mori]
Full name
Exocyst complex component 3      
Alternative Name
Exocyst complex component Sec6
Location in the cell
Cytoplasmic   Reliability : 2.588
 

Sequence

CDS
ATGGATGAAATAGAGGAAGAAGCTAAAGCAGCTGCAGAAAAAATGGTCATGAACATGATGCAAAGACCTGGACAGCTTGAGAAAGTAGAGCATTACAAGAAAAGAATCACACACAAAAAGGCTTCCATAGAAGCACAGTTAAAATCTGCAGTGCAGGGGAAGTTAGATGGAGTAAGTGTCGGGTTAAAACAACTTCAGGAATGTCTTGATGATGTGCAAGAAATCAGTAAAAAAATGGATGAACTAGAGGAATTACTGAAAGGAGTGCCTCCACTTGTTGCTACTCTCCAAGCAGTTCGAGAGGAAGACTTACGACACTCCCAGTATGTCACTGCCATGGATAGCTTGAAACACATTTTTACTGTGCCTGAAAGTGTAGCCAAAACTAAACAATGGATAGGAGAAGGGAAACTTTTACATGCACATCAGTGTTTGAATGACTTAGAAAATTCTAGAGATGATCTGTTGCATGAGCTACATAGACTGCCCAACCAATCATCTCATGACAAAATTATGTTGAAAGCATATTTTGAAGATGTCGAAATAGTTTCTAACTTACTGGAGAAACAGATTAAACTAATCTTAGCTAGAACACTGAATACTGTTAGGAAAGAGCCTACTGTTATCGTGACTGCATTGAGAATTATAGAACGAGAAGAGAAAAGGGATCGAATGGCATTAGAGCAACAAGTACAGTCTGGCTTCCTACCGCCGGGACGACCGAAAAATTGGAAAAACAAAGCATTCGAAGTGCTAGAATGTGCTGTAGCCCAACGGATCGAAGGGACTCGTGTGGACGAGCGGGAAGACAACAAGCTATGGCTCGTTCGCTACTTAGAGTTAACGCGACAACTAATTTTAGAAGATTTGAGGGTAGTCAAAACTTTGTGCGTGCCTTGTTTCCCCCCACATTATGACATCGTTACTAACTATGTCAACATGTATCACACATGTTTATCAGCCAGTTTACAAGACGTAGTACAAAGTGGCATCGAAGGCAATGAATATGTTACACTATTATCTTGGGTTCTAAACACGTACCCAGGACATGAGTTGATGGGCAGCCCAGAATTGAAAATAGATGTGACAACGCTGCCTCCCTTGCTGAGTGATGATGTGATGCAAAGACTTCAAGACGAGTATCTTCGGAAAATGGAAAGTAACTATATGGAGTGGATGGAGAAGACATTGGAGTCTGAGCGCGCCGAGTGGAGCGCCAACCGCGCGCCCGACGTGGAGCCGCACTCCAACGCGTACCACACGCACGCGCCCGTCATCATCTTCCAGATGATCGACCAGAACTTGCAGGTGACGGAGACTATCAGTAAAGATATTACATTCAAGGCTTTACTGTTGAGCATCGATCAAGTGACGCGCTATGGCAACATGTACAGGGAAGGTGTGATACAATTCAAGAACGCGCATTTCTCGGACCGTTCCCGCGTGGTGTACTTCACGCACCACATGATCACGATCGTGAACAACAGCGAGCAGATGGCGCGCCTGGCGCAGCAGACGCAGGCCCGCCACTGGCCGCCCGCCCTGCACGACCCCGCCGCCGAGGCCAAGTTCGACAACATGCTCGCCACCTTCAACAATTTGCGAGACGAAGCTGCTAAATTTCTTCTTGAAGAAGCATTCCTCGACCTTGAAGTTCATTTTGATGACCTGTTCACTTCCAAATGGCTGCCTTCCAGCATTCCAGTAGATACCATCTGCATTACACTCGATGACTATTTCCAAGATTACAACCATTTGAGAGAGAAAAATTTCGAATATGTGATAAACGAAGCTCAGAACTTAGTTTATAGGAAGTACATAACGGCAATGTTGTCCAAGAAAATGGCATTCAAAACTGTTGAGGAAGCACAACAAGCTGCCAATAAGATATTGAAAGAAGGAAAACAAATACGGTCCTTCTTCAAGAAGATAGCGCCCGAGGGTGTTAATGTAGATTGGCCATTTGAAGTCATCTCTATGCTTGCTGAGGTGCTGCGGTGTCAAGACATCGAGATGTTGTCGCTGGACCTGCACAGCGTGGTGTCGAAGTGCGCGGACATGTCGGAGGAGCAGCTGGCGCGGCTGGTGTGGCTGCGCGGGGACGTGCCGCGGGCGCGCCTGCGGGACACCGTGGCCGTCGCGCTCGCCTCCCGCCCCGCGCCGCGCCCCACCGCGCACCCCGCACTCTTCGCGCACATCACCTTCAACGACAGCCTGCTCTCACACTTCGCGCGCTGA
Protein
MDEIEEEAKAAAEKMVMNMMQRPGQLEKVEHYKKRITHKKASIEAQLKSAVQGKLDGVSVGLKQLQECLDDVQEISKKMDELEELLKGVPPLVATLQAVREEDLRHSQYVTAMDSLKHIFTVPESVAKTKQWIGEGKLLHAHQCLNDLENSRDDLLHELHRLPNQSSHDKIMLKAYFEDVEIVSNLLEKQIKLILARTLNTVRKEPTVIVTALRIIEREEKRDRMALEQQVQSGFLPPGRPKNWKNKAFEVLECAVAQRIEGTRVDEREDNKLWLVRYLELTRQLILEDLRVVKTLCVPCFPPHYDIVTNYVNMYHTCLSASLQDVVQSGIEGNEYVTLLSWVLNTYPGHELMGSPELKIDVTTLPPLLSDDVMQRLQDEYLRKMESNYMEWMEKTLESERAEWSANRAPDVEPHSNAYHTHAPVIIFQMIDQNLQVTETISKDITFKALLLSIDQVTRYGNMYREGVIQFKNAHFSDRSRVVYFTHHMITIVNNSEQMARLAQQTQARHWPPALHDPAAEAKFDNMLATFNNLRDEAAKFLLEEAFLDLEVHFDDLFTSKWLPSSIPVDTICITLDDYFQDYNHLREKNFEYVINEAQNLVYRKYITAMLSKKMAFKTVEEAQQAANKILKEGKQIRSFFKKIAPEGVNVDWPFEVISMLAEVLRCQDIEMLSLDLHSVVSKCADMSEEQLARLVWLRGDVPRARLRDTVAVALASRPAPRPTAHPALFAHITFNDSLLSHFAR

Summary

Subunit
The exocyst complex is composed of Sec3/Exoc1, Sec5/Exoc2, Sec6/Exoc3, Sec8/Exoc4, Sec10/Exoc5, Sec15/Exoc6, Exo70/Exoc7 and Exo84/Exoc8.
Similarity
Belongs to the SEC6 family.
Keywords
Coiled coil   Complete proteome   Exocytosis   Protein transport   Reference proteome   Transport  
Feature
chain  Exocyst complex component 3
EMBL
NWSH01003090    PCG66970.1    RSAL01000027    RVE51962.1    KQ460845    KPJ12071.1    + More
AGBW02010564    OWR48314.1    BABH01033414    ODYU01000383    SOQ35074.1    KQ459603    KPI92647.1    JTDY01002364    KOB71574.1    NEVH01008206    PNF34704.1    PNF34701.1    PNF34703.1    GEDC01025126    GEDC01020179    JAS12172.1    JAS17119.1    GL442815    EFN62992.1    LBMM01001275    KMQ96601.1    KK107570    QOIP01000005    EZA48856.1    RLU23090.1    KQ769818    OAD52796.1    GBYB01014216    JAG83983.1    GL767674    EFZ13233.1    KQ977513    KYN02184.1    KZ288416    PBC26041.1    GL449438    EFN82688.1    GECZ01023578    JAS46191.1    KQ982708    KYQ51804.1    KQ414596    KOC69901.1    ADTU01008608    GEBQ01019841    GEBQ01003988    JAT20136.1    JAT35989.1    GL888206    EGI65194.1    KQ981701    KYN37477.1    KQ979480    KYN21262.1    GEZM01041249    JAV80542.1    NNAY01005368    OXU16724.1    AAZX01011224    GECU01022456    JAS85250.1    GGMS01007673    MBY76876.1    AJWK01013041    JXUM01130323    KQ567563    KXJ69366.1    GGMR01001223    MBY13842.1    CH478101    EAT33967.1    CH477434    EAT40984.1    GFDL01000934    JAV34111.1    AXCM01003569    ADMH02000254    ETN67233.1    AXCN02000665    GDKW01001199    JAI55396.1    GBGD01000605    JAC88284.1    GGFK01009730    MBW43051.1    APCN01005836    GGFJ01002533    MBW51674.1    AAAB01008984    EAA14757.3    KK857464    PTY27197.1    ABLF02030605    KQ971361    EFA08819.1    UFQS01002848    UFQT01002848    SSX14740.1    SSX34132.1    GDHC01001552    JAQ17077.1    ATLV01025637    KE525396    KFB52504.1    ACPB03010760    ACPB03010761    CP012524    ALC41462.1    GAKP01005093    JAC53859.1    GDHF01027274    GDHF01015942    JAI25040.1    JAI36372.1    OUUW01000001    SPP75573.1    CH479183    EDW35781.1    GBXI01004121    JAD10171.1    GAMC01000344    JAC06212.1    CM000071    EAL25578.3    CH902619    EDV36395.1    CM000362    CM002911    EDX07707.1    KMY94894.1    CM000158    EDW91604.1    CH480816    EDW48491.1    CH954179    EDV55109.1    AE013599    AY058549    CH963849    EDW74527.1    CH916367    EDW02368.1    CH933808    EDW08292.1    CH940667    EDW57162.1    UFQS01003822    UFQT01003822    SSX15960.1    SSX35295.1    JXJN01000361    GBHO01025089    GBHO01025087    JAG18515.1    JAG18517.1    CCAG010014076    GFXV01000633    MBW12438.1    CVRI01000001    CRK86149.1   
Pfam
PF06046   Sec6        + More
PF07686   V-set
PF01498   HTH_Tnp_Tc3_2
Interpro
IPR010326   EXOC3/Sec6        + More
IPR013106   Ig_V-set       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR002492   Transposase_Tc1-like       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
5B86     E-value=2.74096e-30,     Score=332

Ontologies

Topology

Length:
745
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00411
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00014
outside
1  -  745
 
 

Population Genetic Test Statistics

Pi
15.851251
Theta
14.766841
Tajima's D
-0.778002
CLR
1.823735
CSRT
0.185490725463727
Interpretation
Uncertain
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