SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07311
Pre Gene Modal
BGIBMGA010629
Annotation
PREDICTED:_histidine-rich_glycoprotein-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.587
 

Sequence

CDS
ATGAGAGTTTTACTATTTTCTTGCGTCGCGCTTGCGGCTCTGACATATGTCAGTTGTCGGGCGACAAGGGAGCGACGCGATGCCGACCTAGAGGTTGCGGCCAGTCATCATGGGGGCAAGTGGGACAAAGGAGGTGGACACGAAGACCACGCTCATCATCATCACGATCATGGAGAAAAGGGCCATAAAGGATATAAAGGGCATCATCATCACGAGCACGGGAAGAAGGGACATCATCATCATGAAGGGCACAAAGGACACCACGATGAGCACGGTGGACATAAAAAATATCATCATCACGATGATGGATACCATCATGAGCACCACCATGGTGAAAAGGGTGACAAAGGTCATGGTCATCACGAGGAAGGGCACTATCACAAGGGTCATTCCACAAAAGGACACCATGGTGTCCACAAACATGATGAGTTCAAGAAAGAAAAGCATTTCCATGATCACCATCATGATGGTGGTCATCATGAGCATCACGGTGGACATCACGAGGAGCATGGTCACAAGAAGGGCGGCGGTTTCCATAAAGGACATAAGCACGATGGTCACCATCATCATGAACATGGCAAGAAGGGTCATCACGAGAAGGGTGGACATCATCACGATCATAAGGGCCATCATGACGAAGGTGGCCACCACGAGCATCACCACCATCACCATGATCATGGGGACAAGGGAGGCCATGAACACCACAAGCACTGGGGCCACAAGAAGGGACATTAA
Protein
MRVLLFSCVALAALTYVSCRATRERRDADLEVAASHHGGKWDKGGGHEDHAHHHHDHGEKGHKGYKGHHHHEHGKKGHHHHEGHKGHHDEHGGHKKYHHHDDGYHHEHHHGEKGDKGHGHHEEGHYHKGHSTKGHHGVHKHDEFKKEKHFHDHHHDGGHHEHHGGHHEEHGHKKGGGFHKGHKHDGHHHHEHGKKGHHEKGGHHHDHKGHHDEGGHHEHHHHHHDHGDKGGHEHHKHWGHKKGH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.991349
 
 
Length:
244
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.34303
Exp number, first 60 AAs:
0.34303
Total prob of N-in:
0.03671
outside
1  -  244
 
 

Population Genetic Test Statistics

Pi
10.166594
Theta
14.74955
Tajima's D
0.401207
CLR
1.448799
CSRT
0.503524823758812
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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