SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07309
Pre Gene Modal
BGIBMGA010662
Annotation
PREDICTED:_histidine-rich_glycoprotein-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.647
 

Sequence

CDS
ATGAATTCGGCTCTACTCCTGAGCTGTGGTGTCCTCGTCGCGCTTATAGCACTGACACAAACTCGCGATTTGCGAGAAAAGCGCGACGCTGATCTTGAATCCGCCGCGTCTCATCATCACGAAAAGGGTGGAGGCAAAGACTTCCATGCCCATCATCATCACGACCACGGTGGCAAAGGACACAAGGGTTACAAAGGGCATCATCACCATGAACATGGCAAAAAGGGACATCATCACCACGACGGCCACAAAGGCCACCACGACGACCACGGGGGACACAAGAAGCATCACCACCACGATGAAGGCCATCATGACGAGCACCACCACGGTGAAAAAGGGGAGAAGGGGCATGGCTTCGAAGAGAAGGGCCATTACCATAAGGGACACTCAACGAAAGGCCATCATGGAGTTCATAAGGTAGATGAGTTCAAGAAGGATAAGCACTTCCACCACAAACACGGGGAGTCTGGATATGAAGAAGGCCATGGTGGACACCATCATGAGCATGGACACAAGAAGGGAGGTCACTTCCATAATGGACACAAACATGACGGCCACCACGAGCACCACCATGGAAAGAAGGGACATCACGAGAAAGGCGGACATCATCACGAGCACAAGGGCCACCATGATGAAGGCGGTCACCATGAACATCATCACCACCACCATGGTCATGGAAAGAAGGACGGACACGAAGACCACAAGCACTGGGGCTTTAAGAAAGGACATTAA
Protein
MNSALLLSCGVLVALIALTQTRDLREKRDADLESAASHHHEKGGGKDFHAHHHHDHGGKGHKGYKGHHHHEHGKKGHHHHDGHKGHHDDHGGHKKHHHHDEGHHDEHHHGEKGEKGHGFEEKGHYHKGHSTKGHHGVHKVDEFKKDKHFHHKHGESGYEEGHGGHHHEHGHKKGGHFHNGHKHDGHHEHHHGKKGHHEKGGHHHEHKGHHDEGGHHEHHHHHHGHGKKDGHEDHKHWGFKKGH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.969125
 
 
Length:
243
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.42558
Exp number, first 60 AAs:
4.42558
Total prob of N-in:
0.16195
outside
1  -  243
 
 

Population Genetic Test Statistics

Pi
7.658486
Theta
12.109954
Tajima's D
-1.111338
CLR
13.730537
CSRT
0.11694415279236
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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