Gene
KWMTBOMO07304
Pre Gene Modal
BGIBMGA010632
Annotation
PREDICTED:_E3_ubiquitin-protein_ligase_RNF8-A-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.002
Sequence
CDS
ATGAACGATGAAATTCTACCTAAACTAATAACTTGCAAACCTTTAAAAGATGAATTCAATCATTTGAATGAGATTCATCTAAGCTCTAACGAATTTTCAGTTGGACGTGCTACACAAAATGAGGCAATTATACCTTTTCTATCAATATCACGGAACCATTGCATATTTAAGAAAACTAACGACAACGATTGGACCATCGAAGACAGAAGTACATTTGGTATTGAAATTAATGGAACAAAACTTGGCAAAGGCAAAAGCAAAAGATTATACCATCAAGACATTATTAACCTGGAACCCTCTGGAGAATTTTTATACAGATATATTCATTCTAATGATGATTTTGAGACACCGAGGAAACGTTTTAAGATTGAAAAATCCCAAAACACGTCTGATGGTGACATCGCATATGATGTGAAAGTAAAATTTGAAGCGTCCCAGAAATATGAGATTGAGCATATAGAAGACAAAATACAGAATGCTAAACAAATGCAAACAACATCATTGATATTAAAACAACAATTAGAACTGGATATGGATAGACAGATACAACAGTTGAAAAATGATTACGCATCACAAATAGAAAACTTACAGGGAGAAAAGGATGAAGTTGAAAAACAAAAGGTTTTTCTCATTGAACAAAGGGATGCAGAATTAACAGCTGTTAGAAAAGACATGGAAGGCAAAATATCTGAACTAATGGATCAAATACAAAGACATAATGAAACCGAAGCCGAATTAATGACCGAGAACAGTTTATTAAAAGAAAAATTATTAAAAGAAAGGGAAGAATTTATTTGTGAACTAAACCGAGAGAGTTCTTCGAAACAAGATATGCTCATGAAACTAGAAACTAAAATCAAGGAACAGGAGGAAATAAGATATAAAGAAAAAATAGAGTTAGAACAAATGCTTAAAAAAGAAACAGAACAGTTAAGGATAGCAAAAGAAAAGGAACTAAAAGAACTTGAAGAGCAAAAATTAAAAAGGGAAAGGGAACTAGAACAAGAATTGGTTAACATTAAACAGAACTTACAAGAACAAGTCAAACAGACTGAAGAACAAAGAATCAAAGCTCTACAAGATCTAAATAGACAAAAAGAAGAGATGAAAAAACTAAGTGAAGGGGAAAAAGCAAAAATGGAACAACTTATCCAAGAGAGGGAAGAAATCCAATTAAAGTTACAAGAGGCACAAACAGCAGCTGAGAAATCTCTAGCCGATCTACAGATTCGAGTACAAACAAGAGAGATTGAATTGGCTGCTTTAGCGGCGGAAAGAATACAACAACAAGCAGATCACTCGAGTGAAGTCATAAAAAACTTGCAAAATCAACTGGAAATGGTAAAGAATCAACTACAGAGCGTTGAAACAGAGAAAAAGAAACACTTAAACAATTCTGATTCTGAACCAATTCGTGAAGGCTCATCAACACAAACATTCAACGAAGTGGGTGAAGTCATGGAAAGTGAATTACAATGCAGTATATGTGCCGAATTATTTGTAAAAGCCACTACACTGAACTGCTCTCACACTTTCTGTTTGTATTGTATATCGATGTGGAAAAAGAAGAAAAAAGATTGTCCAATCTGCAGGACTTCAATATCTACTGAATGCAAAAGTTTAGTTTTAGATACATTTATTGAAAGGATGGTACAGAAACTTCCAGAAGAAACGAAGTTGAAAAGAAAAGAACTACTTAAATCTAGACAAGAGCTCGAGTCTGAAGCGGACCGATCGAACATTAGTGAAACCGATGACCGAAGAAATGTCAGCTTTAACAGCTCCGAAACGTCAGACTCCGAAATCTTCGAGGAGGAGGAGGAGGAGGAATACAATGATTACGAATCCGACGATGATAATTCCGGAAGAATCTGGGTCCAATCGTCCGATTCCGACGATAGATTTGACGATGATTTCAACTTCTTCGACAATGCTTCCGAATTCAGTGACAGCGACAGCGACTTCACCCTCTCGTGTGGGTCCGAGACTGGAAACGATAGTGATGGTGTCAGGCGGCTCGGCGTTGTCGCAGGTCGTCCAGGGTCCTACTACGGTGGCTATGGAAGATGTTACAAATGCGGTTGCAGGGGACATTGGCTTCCCGGCTGCCCGTTCTAG
Protein
MNDEILPKLITCKPLKDEFNHLNEIHLSSNEFSVGRATQNEAIIPFLSISRNHCIFKKTNDNDWTIEDRSTFGIEINGTKLGKGKSKRLYHQDIINLEPSGEFLYRYIHSNDDFETPRKRFKIEKSQNTSDGDIAYDVKVKFEASQKYEIEHIEDKIQNAKQMQTTSLILKQQLELDMDRQIQQLKNDYASQIENLQGEKDEVEKQKVFLIEQRDAELTAVRKDMEGKISELMDQIQRHNETEAELMTENSLLKEKLLKEREEFICELNRESSSKQDMLMKLETKIKEQEEIRYKEKIELEQMLKKETEQLRIAKEKELKELEEQKLKRERELEQELVNIKQNLQEQVKQTEEQRIKALQDLNRQKEEMKKLSEGEKAKMEQLIQEREEIQLKLQEAQTAAEKSLADLQIRVQTREIELAALAAERIQQQADHSSEVIKNLQNQLEMVKNQLQSVETEKKKHLNNSDSEPIREGSSTQTFNEVGEVMESELQCSICAELFVKATTLNCSHTFCLYCISMWKKKKKDCPICRTSISTECKSLVLDTFIERMVQKLPEETKLKRKELLKSRQELESEADRSNISETDDRRNVSFNSSETSDSEIFEEEEEEEYNDYESDDDNSGRIWVQSSDSDDRFDDDFNFFDNASEFSDSDSDFTLSCGSETGNDSDGVRRLGVVAGRPGSYYGGYGRCYKCGCRGHWLPGCPF
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00498 FHA
Interpro
Gene 3D
CDD
ProteinModelPortal
PDB
4WHV
E-value=3.94683e-16,
Score=210
Ontologies
GO
Topology
Length:
705
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00549
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1 - 705
Population Genetic Test Statistics
Pi
16.126224
Theta
17.949766
Tajima's D
-0.510252
CLR
0.765362
CSRT
0.237938103094845
Interpretation
Uncertain
