Gene

KWMTBOMO07303

Pre Gene Modal

BGIBMGA010658

Annotation

PREDICTED:_cleft_lip_and_palate_transmembrane_protein_1_homolog_[Amyelois_transitella]

Location

Bomo_Chr12(+):10179508-10182069      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.931

CDS

ATGTCTGAAGCTGAAAAAATGTTATCTACTCAGTCTGGTCCTCCTGAAAATGAATCATCAGAGAACTCTGAAAACATAAGCCACGATGGTTCAAGTGTGGTTGCTGCAGATGATAATCTCGATATTAATGCTCGCGTTGAAGAGGAACGTCGTAGAATGCAACCAACTAAATTAGAATCATTCTTTGCCATTACAAAATCATTGATAATCAGAGCTTTAGTAGTTTATTTTATTACTTCTATGTTTAGACAGCCATCTGCTCCAAAAACAGATATCAATAATCCATCTAGTGCCCCAAGAGCACCAGCTGTGAATATGTTTGCAAATGGAACTATACTAGACATGTACTGTTATCTGTCTGAACAAGAATTTAATACAAATTTTGACAATTCAAATTTAATTTGGCAGCACAGTGGTTTGGTGTATGGAGATTGGTATTCAGGTCCGAATGGTGATGGATCATACAGTCACTCAGCAAGCATAACACCATCATTTGCGTTAAAAAATAATGGATCCATTTATCTACATGTTTATATTGTACCTTCTGGGAAATCACCGGATCCTAACAATAGACAAAACTTTGCTGGCCCTTACATCTCTGTTGAGAAAAAGATGTTAAATAAATATAAGAAGTTGAAGTATCAAAAGACTCTAAATTTACTAACAGGTCAAACAGAGAAATCTGAAGAAGAAATTAAGAAAGCTGAAACTGTAAAAGAAGAAATTGTTTCACATTGGCATCCTAACTTAACTATTAATTTGGTAAATGACCAAACAAATTGGGTACAAGGGAGTGTACCACCACCTCTAGATGAATTCATTTATTTTCTACCTGATGGTAAACAATATAAACCTGCTGTATTTTTAAATGATTACTGGAATATGATGCGTGATTATGTACCTATTAATAAAACAACAGAAGTTCTTAACTTACAATTGACATATCAACCACTTAGTCTGTTCAAGTGGCAACTTTATACTGCACAGGCAATGAGAGACAAGCTTAGCATGTTTTCTGCTTTAGGGGCTGAAGAACAGGATGAAGACCAGGACACTGTAAAGGAATTGTTACTTGACACTTCTCCATATTTGCTGGCATTGACAATCTCAGTTTCAATTTTACACTCTATATGTGAACTTTTAGCATTCAAAAATGATATACAGTTTTGGAACAACAGGCAGTCTTTAGAAGGATTATCTGTCCGTTCAGTATTTTTTAATGTTTTCCAGTCTACAATTGTACTCCTCTATGTTCTGGATAATGAAACCAATGTAATGGTTAGAATATCGTGTTTCATTGGATTATTAATTGAAATTTGGAAAATAAATAAAGTTATGGATGTTAAGATAAATAGAGAAAGCCGTATACTGGGCATTCCAAAACTGTCATTTACTGACAAGGGATCATATGTGGAATCTAGCACTAAACAATATGACATGTTGGCTTTTCGTTATTTGAGTTGGGCATGTTTTCCACTCTTGATTGGCTATGGTGTTTATTCATTACTGTATCAGGAACATAAAGGGTGGTATTCCTTCATATTGAACATGATGTATGGCTATCTTTTGACATTTGGATTCATTATGATGACCCCACAATTATTCATCAATTATAAGTTAAAATCGGTGGCCCATCTTCCTTGGCGAATGATGACATACAAATTTCTGAACACATTCATTGATGATATTTTTGCATTTGTAATCAAAATGCCAACTATGTATAGATTGGGATGTTTTAGAGATGATATAGTATTCTTTATCTTTTTGTACCAACGCTGGATTTACAAGGTTGACCACAAACGTGTTAATGAATTTGGCTTTTCTGGTGAAATGGAAGAGCAACAGAAGCAAGCTAAAAATGGAGCTCTAGCTATTACTGAATCTGAAGATATTGCCAACAAGAAGAATGATTAA

Protein

MSEAEKMLSTQSGPPENESSENSENISHDGSSVVAADDNLDINARVEEERRRMQPTKLESFFAITKSLIIRALVVYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFDNSNLIWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQNFAGPYISVEKKMLNKYKKLKYQKTLNLLTGQTEKSEEEIKKAETVKEEIVSHWHPNLTINLVNDQTNWVQGSVPPPLDEFIYFLPDGKQYKPAVFLNDYWNMMRDYVPINKTTEVLNLQLTYQPLSLFKWQLYTAQAMRDKLSMFSALGAEEQDEDQDTVKELLLDTSPYLLALTISVSILHSICELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQSTIVLLYVLDNETNVMVRISCFIGLLIEIWKINKVMDVKINRESRILGIPKLSFTDKGSYVESSTKQYDMLAFRYLSWACFPLLIGYGVYSLLYQEHKGWYSFILNMMYGYLLTFGFIMMTPQLFINYKLKSVAHLPWRMMTYKFLNTFIDDIFAFVIKMPTMYRLGCFRDDIVFFIFLYQRWIYKVDHKRVNEFGFSGEMEEQQKQAKNGALAITESEDIANKKND

Uniprot

A0A2A4J749   A0A2H1VG74   A0A3S2LPA9   A0A0N1IQE6   A0A194PJ06   A0A0L7LSZ4   + More
H9JMA5   A0A1E1WNT2   E2AUW1   U5EUK0   A0A182QM45   B0W5N9   A0A1B0D4J5   A0A2J7PS95   A0A023EVJ6   A0A182NE37   A0A182GBS7   E2B8D0   A0A2P8YIS7   A0A182GR85   A0A1B6G4Q6   A0A195FJY0   A0A336LTZ5   A0A1Q3F8A7   A0A088ANA5   A0A1Q3F8K8   V9ILG1   A0A0M8ZQZ8   A0A2A3EBS5   K7IVY1   A0A026W5S9   A0A1L8D916   A0A1S4FDT7   A0A195BFE7   A0A2M4BG69   A0A158NRB2   Q0IF41   A0A084VP32   Q7Q3K6   A0A1J1HNG3   A0A151JBI8   A0A182MPU0   A0A182K1E8   A0A2M3Z1P9   A0A182WT85   A0A182YGU4   A0A1Y9G8B5   A0A182W7V6   A0A182HV78   A0A182V2N2   A0A1S4GWP2   A0A182U551   A0A182L230   A0A232EVH6   W5J870   A0A182J1B6   A0A151IFL4   A0A2M4AE74   A0A0L7RGT4   A0A182RBL9   A0A0A1XN51   A0A182PJ72   W8C2I6   A0A034WSI4   A0A034WNK1   A0A1J1IMS4   A0A3B0J9Y8   A0A0K8VWI2   A0A0C9QTJ5   B3MLU7   B4N0N2   A0A0K8TQ32   A0A1I8N9P0   B4NYI3   B3N3P9   A0A1W4V2Y1   B4KFP8   A0A1I8QDB9   A0A0L0CBR7   A0A1B6E9K7   T1PDI7   B4MDC7   Q29NP2   B4GQR0   B4JD39   A0A240SWL2   A0A1B0B5R7   A0A1A9UMV9   A0A0M5IVY0   A0A1A9ZJ31   B4I370   Q9VQX6   A0A1W7RAS7   B4NRW3   A0A0N7Z9A4   T1HZ64   A0A1A9W0F4   R4G484   A0A087UJA7  

Pubmed

26354079    26227816    19121390    20798317    24945155    26483478    + More
29403074    20075255    24508170    30249741    21347285    17510324    24438588    12364791    25244985    20966253    28648823    20920257    23761445    25830018    24495485    25348373    17994087    26369729    25315136    17550304    26108605    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    27129103   

EMBL

NWSH01002640    PCG67781.1    ODYU01002368    SOQ39781.1    RSAL01000504    RVE41518.1    + More
KQ459752    KPJ20202.1    KQ459603    KPI92704.1    JTDY01000153    KOB78567.1    BABH01033372    BABH01033373    GDQN01002394    JAT88660.1    GL442898    EFN62769.1    GANO01002284    JAB57587.1    AXCN02000872    DS231844    EDS35692.1    AJVK01003266    NEVH01021938    PNF19201.1    GAPW01000420    JAC13178.1    JXUM01052982    KQ561757    KXJ77620.1    GL446310    EFN88050.1    PYGN01000568    PSN44104.1    JXUM01016288    JXUM01016289    JXUM01016290    KQ560454    KXJ82338.1    GECZ01012350    JAS57419.1    KQ981522    KYN40567.1    UFQT01000108    SSX20109.1    GFDL01011240    JAV23805.1    GFDL01011192    JAV23853.1    JR053561    AEY61963.1    KQ435944    KOX68196.1    KZ288292    PBC29187.1    KK107390    QOIP01000007    EZA51425.1    RLU20428.1    GFDF01011133    JAV02951.1    KQ976504    KYM82912.1    GGFJ01002915    MBW52056.1    ADTU01023845    CH477394    EAT41898.1    ATLV01014972    KE524999    KFB39726.1    AAAB01008964    EAA12218.3    CVRI01000013    CRK89589.1    KQ979122    KYN22521.1    AXCM01007613    GGFM01001617    MBW22368.1    APCN01002500    NNAY01001995    OXU22354.1    ADMH02001962    ETN60161.1    KQ977771    KYM99988.1    GGFK01005691    MBW39012.1    KQ414596    KOC70043.1    GBXI01001533    JAD12759.1    GAMC01006529    JAC00027.1    GAKP01001807    JAC57145.1    GAKP01001806    JAC57146.1    CVRI01000055    CRL01464.1    OUUW01000004    SPP79094.1    GDHF01009081    JAI43233.1    GBYB01003992    JAG73759.1    CH902620    EDV30818.1    CH963920    EDW77645.1    GDAI01001106    JAI16497.1    CM000157    EDW87616.1    CH954177    EDV57708.1    CH933807    EDW11013.1    JRES01000736    KNC28879.1    GEDC01002754    JAS34544.1    KA646826    AFP61455.1    CH940661    EDW71188.1    CH379059    EAL34176.1    CH479187    EDW39932.1    CH916368    EDW04283.1    JXJN01008839    CP012523    ALC38081.1    CH480820    EDW54215.1    AE014134    AY052040    AAF51035.2    AAK93464.1    GFAH01000152    JAV48237.1    CH981594    CM002910    EDX15341.1    KMY88034.1    GDKW01001099    JAI55496.1    ACPB03008638    GAHY01000996    JAA76514.1    KK120066    KFM77446.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000053268    UP000037510    UP000005204    + More
UP000000311    UP000075886    UP000002320    UP000092462    UP000235965    UP000075884    UP000069940    UP000249989    UP000008237    UP000245037    UP000078541    UP000005203    UP000053105    UP000242457    UP000002358    UP000053097    UP000279307    UP000078540    UP000005205    UP000008820    UP000030765    UP000007062    UP000183832    UP000078492    UP000075883    UP000075881    UP000076407    UP000076408    UP000069272    UP000075920    UP000075840    UP000075903    UP000075902    UP000075882    UP000215335    UP000000673    UP000075880    UP000078542    UP000053825    UP000075900    UP000075885    UP000268350    UP000007801    UP000007798    UP000095301    UP000002282    UP000008711    UP000192221    UP000009192    UP000095300    UP000037069    UP000008792    UP000001819    UP000008744    UP000001070    UP000092443    UP000092460    UP000078200    UP000092553    UP000092445    UP000001292    UP000000803    UP000000304    UP000015103    UP000091820    UP000054359   

PRIDE

H9JMA5    Q9VQX6   

Pfam

PF05602   CLPTM1        + More
PF00781   DAGK_cat

Interpro

IPR008429   CLPTM1        + More
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR017438   ATP-NAD_kinase_N       
IPR035974   Rap/Ran-GAP_sf       
IPR039930   RALGAPB       

SUPFAM

SSF111331   SSF111331        + More
SSF111347   SSF111347       

Gene 3D

3.40.50.10330    

ProteinModelPortal

A0A2A4J749   A0A2H1VG74   A0A3S2LPA9   A0A0N1IQE6   A0A194PJ06   A0A0L7LSZ4   + More
H9JMA5   A0A1E1WNT2   E2AUW1   U5EUK0   A0A182QM45   B0W5N9   A0A1B0D4J5   A0A2J7PS95   A0A023EVJ6   A0A182NE37   A0A182GBS7   E2B8D0   A0A2P8YIS7   A0A182GR85   A0A1B6G4Q6   A0A195FJY0   A0A336LTZ5   A0A1Q3F8A7   A0A088ANA5   A0A1Q3F8K8   V9ILG1   A0A0M8ZQZ8   A0A2A3EBS5   K7IVY1   A0A026W5S9   A0A1L8D916   A0A1S4FDT7   A0A195BFE7   A0A2M4BG69   A0A158NRB2   Q0IF41   A0A084VP32   Q7Q3K6   A0A1J1HNG3   A0A151JBI8   A0A182MPU0   A0A182K1E8   A0A2M3Z1P9   A0A182WT85   A0A182YGU4   A0A1Y9G8B5   A0A182W7V6   A0A182HV78   A0A182V2N2   A0A1S4GWP2   A0A182U551   A0A182L230   A0A232EVH6   W5J870   A0A182J1B6   A0A151IFL4   A0A2M4AE74   A0A0L7RGT4   A0A182RBL9   A0A0A1XN51   A0A182PJ72   W8C2I6   A0A034WSI4   A0A034WNK1   A0A1J1IMS4   A0A3B0J9Y8   A0A0K8VWI2   A0A0C9QTJ5   B3MLU7   B4N0N2   A0A0K8TQ32   A0A1I8N9P0   B4NYI3   B3N3P9   A0A1W4V2Y1   B4KFP8   A0A1I8QDB9   A0A0L0CBR7   A0A1B6E9K7   T1PDI7   B4MDC7   Q29NP2   B4GQR0   B4JD39   A0A240SWL2   A0A1B0B5R7   A0A1A9UMV9   A0A0M5IVY0   A0A1A9ZJ31   B4I370   Q9VQX6   A0A1W7RAS7   B4NRW3   A0A0N7Z9A4   T1HZ64   A0A1A9W0F4   R4G484   A0A087UJA7  

KEGG

101745612    no KO assigned | (RefSeq) cleft lip and palate transmembrane protein 1 homolog

GO

GO:0016021   GO:0003951   GO:0051056   GO:0005096   GO:0012505   GO:0006886   GO:0008536   GO:0042626   GO:0007156   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

PANTHER

PTHR21347   PTHR21344  

Length:

637

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

109.2664

Exp number, first 60 AAs:

0.95345

Total prob of N-in:

0.76239

inside

1  -  59

TMhelix

60  -  82

outside

83  -  484

TMhelix

485  -  504

inside

505  -  508

TMhelix

509  -  531

outside

532  -  545

TMhelix

546  -  568

inside

569  -  637

 

 

Pi

6.81691

Theta

6.530325

Tajima's D

0.7196

CLR

0.637386

CSRT

0.59722013899305

Interpretation

Uncertain