Gene

KWMTBOMO07302  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010657

Annotation

CRM1_[Spodoptera_frugiperda]

Location

Bomo_Chr12(+):10170308-10176181      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.273 PlasmaMembrane   Reliability : 1.628

CDS

ATGGCAACCTTAGAACAACAGGCATCTAAACTTTTGGATTTCAATCAAAAATTGGACATCAATTTATTGGACAACATTGTTGGCTGTTTATATTCTGCTGTTGGGGATCAACAACGTGTTGCTCAGGATATACTGACTGCTTTGAAGGAACATCCTGATGCTTGGACTCGTGTTGATACAATACTTGAATATTCTCAAAATCAAGAAACTAAATATTATGCATTACAAATATTAGAACAAGTAATACTAACGAGATGGAAAATATTACCAAGAAATCAGTGTGAGGGTATAAAAAAATATATAGTTGGCCTTATCATTAAAAATTCATCAGATCCTGTTACGATGGAAAGCAACAAAGTTTATTTGAAAAAACTAAACATGATCCTTATTCAAGTTCTGAAAAGAGAATGGCCCCATAATTGGGAAACTTTTATCAGTGACATTGTGGGTGCCTCAAAGACGAATGAAAGTCTCTGTCAAAACAATATGGAAATATTCAAGTTGTTGAGTGAAGAAGTATTTATGTTTAGTACAGGCCAGCTCACACAAACAAAAGCTAAGCATCTAAAAGATACAATGTGTTCAGAATTCAGTCAAATCTTTCAGCTATGCCAATTTGTCTTGGAAAATTCACAAAATGCACCTTTAGTTGGAGTGACCTTAGACACTCTTTTGAGATTTTTAAATTGGATTCCACTTGGTTATATTTTCGAAATGAAATTGATAAGCACATTGATATTTAAGTTTCTGAACGTGCCGATGTTTAGGAATGTAACATTGAGCTGTCTTACTGAAATTGCCGGTGTCACAGTCAGCAATTATGATCAGCAGTTTGTTTATTTGTTTGTACAAACTATGGAACAACTTGAAGTTATGCTTCCTCTAACTACAAACATACGTGAAGCATATGTAGCTGGTCGAGATCAGGAACAAGTTTTTATTCAAAATCTTGCACTTTTCTTATGCACATATCTAAAAGAGCATGGTCCGCTCATAGAAAAGAGTGGATTAACAAACACTTTAATGAATGGTTTGAGGTATCTTGTCTTAATATCAGAGGTAGAAGATGTAGAAATTTTCAAAATTTGTCTTGAATATTGGAATGCTCTTGCTGCTGATTTGTACAAAATTGCGCCATGTTCGTCAAACTTGTACCATTTGGGTAAAAGTGGAGGCCGAAAAGCTTTGTATGCTGATGTCTTGAGCAGTGTTCGGTATATTATGATCTCGAGAATGGCAAAACCAGAAGAGGTGTTAGTTGTTGAAAATGAAAATGGTGAAGTTGTGAGAGAATTTATGAAGGACACAGACTCCATTAATTTGTATAAAAATATGAGAGAAACATTAGTTTACTTGACACATTTAGACTATTTAGATACTGAACGTATTATGACAGAGAAATTACAAAATCAAGTAAATGGTACTGAGTGGTCATGGAAGAACTTGAACACATTATGTTGGGCAATTGGATCTATTTCTGGAGCTCTATCTGAGGATGATGAAAAGAGATTTTTGGTTATTGTGATTAAAGAGCTTCTAGGTCTCTGTGAACAGAAAAAGGGAAAAGATAACAAAGCTATAATTGCTAGTAACATAATGTATGTCGTAGGACAATACCCACGCTTTCTTCGTGCACATTGGAAATTTTTAAAAACCGTTGTCAATAAACTTTTTGAATTCATGCATGAAACACATGATGGTGTCCAAGACATGGCGTGTGATACATTCATAAAAATTGCTATAAAATGCCGTCGACATTTTGTCACTACTCAAGTTGGAGAAGCCTGTCCTTTTATTGAAGAAATATTGGGCACCATTAGTACTATAATTTGTGATTTACAAACATTGCAAGTTCACACTTTTTATGAAGCTGTTGGATACATGATCAGTGCCCAAGTAGATCAAGTAGCCCAAGAACTTTTAATTGAAAAATACATGCTTCTGCCTAATCAAGTTTGGGATGATATTATATCTCAAGCTTCTCGTAATGTTGAAATCTTGAAAGACCCTGAAGCTGTTAAACAACTTGTAAGTATACTGAAAACAAATGTGCGTGCATGTCGTGCACTAGCACACCCATATGTTGTGCAATTAGGAAGGATATACCTTGACATGCTTAATGTTTACAAAGTAATGTCTGAAAATATAAGTCAAGCCATAGCTTTAAATGGCGTAGCAGTTACTAAACAACCTCTCATTAAGAATATGAGAATAATAAAAAAGGAAACTTTGAACCTTATTTCAAGTTGGGTTACACGCTCGATTGATAACAGTATGGTTTTGGAAAACTTTATTCCACCTCTTCTCGATGCTGTGCTTTTGGATTACCAAAGGACTGCTGTTCCTGAAGCTCGTGAGCCTGAAGTACTGTCTTGCATGGCAGCAATCGTGCACAGACTTGAAGGACATATAACTTCTGAAGTACCAAAAATATTTGATGCAGTCTTTGAATGTACTCTGGAAATGATTAACAAAGACTTTGAAGAGTATCCAGAACATAGAACAGAATTTTTCTTATTACTGCAGGCGGTCAATACAAACTGTTTCAAAGCATTTTTGAGCATACCACCAGCACAATTCAAGTTGGTTTTAGATTCCATAATCTGGGCATTTAAACATACAATGAGGAATGTGGCAGATACCGGTTTACAAATATTGTACCGACTGTTGTTAAATGTTGAGGAACATCCACAGGCAGCACAGAGTTTTTACAGAACCTACCTTTGTGACATTTTGGAGCATGTCTTCAGTGTAGTCACTGATACATCACATGGTGCAGGACTCACTATGCACGCTACAATCCTGGCTCACATTTTCTCATTGGTAGAGGCTGGCCGAGTTACTGTACCACTTGGACCCACACCAGACAATGTTCTTTATATTCAGGAATATATCGCAAATCTCTTGAAAACAGCATTTTCACACTTAACTGATAACCAAATTAAAATTACTGTACAAGGCCTGTTCAACCTGAATCAAGATATACCTGCTTTCAAGGATCATCTCAGAGACTTCTTAGTTCAAATTAGAGAGTACACTGGTGAAGATGATAGCGATTTGTACTTGGAAGAGCGTTTGTTTGTATTACGTCAGGCACAAGAAGATAAGAGAACAGTGCAGTTGTCAGTGCCCGGCATTCTGAACCCTCATGAATTGCCTGAAGAGATGCAAGATTAA

Protein

MATLEQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRVDTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNMEIFKLLSEEVFMFSTGQLTQTKAKHLKDTMCSEFSQIFQLCQFVLENSQNAPLVGVTLDTLLRFLNWIPLGYIFEMKLISTLIFKFLNVPMFRNVTLSCLTEIAGVTVSNYDQQFVYLFVQTMEQLEVMLPLTTNIREAYVAGRDQEQVFIQNLALFLCTYLKEHGPLIEKSGLTNTLMNGLRYLVLISEVEDVEIFKICLEYWNALAADLYKIAPCSSNLYHLGKSGGRKALYADVLSSVRYIMISRMAKPEEVLVVENENGEVVREFMKDTDSINLYKNMRETLVYLTHLDYLDTERIMTEKLQNQVNGTEWSWKNLNTLCWAIGSISGALSEDDEKRFLVIVIKELLGLCEQKKGKDNKAIIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAIKCRRHFVTTQVGEACPFIEEILGTISTIICDLQTLQVHTFYEAVGYMISAQVDQVAQELLIEKYMLLPNQVWDDIISQASRNVEILKDPEAVKQLVSILKTNVRACRALAHPYVVQLGRIYLDMLNVYKVMSENISQAIALNGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLDYQRTAVPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEEHPQAAQSFYRTYLCDILEHVFSVVTDTSHGAGLTMHATILAHIFSLVEAGRVTVPLGPTPDNVLYIQEYIANLLKTAFSHLTDNQIKITVQGLFNLNQDIPAFKDHLRDFLVQIREYTGEDDSDLYLEERLFVLRQAQEDKRTVQLSVPGILNPHELPEEMQD

Uniprot

H9JMA4   A0A1E1WF48   A0A2A4J8R0   A0A0S2MU13   A0A212EH89   A0A0N1PJF4   + More
A0A194PNK6   S4PE76   A0A3S2L8T7   A0A0L7LSX2   A0A067R5K6   A0A151IP52   A0A0J7KFR1   A0A195FVZ2   A0A2J7R911   F4WNS6   A0A195B8P6   A0A158NW25   A0A195ECH5   A0A026WJN7   K7IQJ4   A0A232FE09   A0A154PI79   A0A0V0G423   A0A224XH56   A0A069DXT0   A0A087ZMS1   D6X0Q6   A0A0P4VTA0   A0A0T6AZF3   A0A1Y1MZ97   A0A2A3E6Y5   A0A0A9WM64   A0A0K8SDD3   A0A1B6DS12   A0A1B6JXF3   A0A151X7I5   A0A1W4XPR0   N6TJI2   A0A293MVZ7   A0A0P4WCE4   A0A0P4WHK7   A0A2R5L7Z6   A0A087TAY2   A0A1D2NK16   V5I1V1   A0A131YVA4   A0A1J1I615   A0A1W5A0P4   A0A3Q3S1N3   A0A3B3I741   A0A3P9LG22   L7M5Z0   A0A131XFJ1   A0A218URZ2   A0A093FS26   A0A3Q1EGB9   U3I8L1   A0A1D5P8H7   U3K8W1   A0A3P9CR46   A0A1U7RM64   A0A0F8B6D8   A0A3Q2W904   A0A315VUI3   A0A3P8PZM5   A0A091QE91   A0A1A7Y3Q1   A0A3N0XW18   A0A3B3B4I4   A0A1A8ELR3   A0A3B3VUG1   A0A250Y6Q4   D2HZX2   E2R9K4   A0A341C1V7   L8IXM5   G3TDG6   U6CR70   A0A3Q2I6B8   A0A2U4BZ49   A0A340XSA9   A0A2Y9EU68   A0A2Y9HZK7   M3VYZ8   A0A2Y9JG64   A0A3Q7RRM9   A0A3P4MAY6   A0A1U7TKR2   A0A2Y9QBU2   E1BE98   M3Y2G7   A0A2K6G794   A0A2U3VRC8   A0A3Q7VSE8   A0A3Q7NT77   A0A384AR15   A0A3B3UPB7   A0A3P9NZU7   A0A3B5R002  

Pubmed

19121390    22118469    26354079    23622113    26227816    24845553    + More
21719571    21347285    24508170    30249741    20075255    28648823    26334808    18362917    19820115    27129103    28004739    25401762    26823975    23537049    27289101    25765539    26830274    17554307    25576852    28049606    23749191    15592404    25186727    25835551    29703783    29451363    28087693    20010809    16341006    22751099    19892987    17975172    19393038    23542700   

EMBL

BABH01033370    BABH01033371    GDQN01005430    JAT85624.1    NWSH01002640    PCG67783.1    + More
KT208379    ODYU01002368    ALO79336.1    SOQ39780.1    AGBW02014932    OWR40846.1    KQ459752    KPJ20201.1    KQ459603    KPI92705.1    GAIX01003281    JAA89279.1    RSAL01000504    RVE41519.1    JTDY01000153    KOB78568.1    KK852870    KDR14611.1    KQ976892    KYN07249.1    LBMM01007957    KMQ89268.1    KQ981215    KYN44487.1    NEVH01006721    PNF37319.1    GL888237    EGI64269.1    KQ976565    KYM80564.1    ADTU01002913    KQ979074    KYN22811.1    KK107168    QOIP01000008    EZA56215.1    RLU19561.1    NNAY01000360    OXU28902.1    KQ434899    KZC10900.1    GECL01003306    JAP02818.1    GFTR01008514    JAW07912.1    GBGD01000253    JAC88636.1    KQ971371    EFA09995.1    GDKW01000762    JAI55833.1    LJIG01022446    KRT80563.1    GEZM01017018    JAV90964.1    KZ288363    PBC26929.1    GBHO01035093    GBHO01015441    GDHC01008944    GDHC01000287    JAG08511.1    JAG28163.1    JAQ09685.1    JAQ18342.1    GBRD01017708    GBRD01015026    JAG50800.1    GEDC01008855    JAS28443.1    GECU01004133    JAT03574.1    KQ982449    KYQ56280.1    APGK01035522    APGK01035523    KB740926    ENN78028.1    GFWV01018762    MAA43490.1    GDRN01052587    JAI66278.1    GDRN01052586    JAI66279.1    GGLE01001473    MBY05599.1    KK114363    KFM62271.1    LJIJ01000020    ODN05594.1    GANP01003030    JAB81438.1    GEDV01006147    JAP82410.1    CVRI01000038    CRK94382.1    GACK01005323    JAA59711.1    GEFH01003683    JAP64898.1    MUZQ01000154    OWK56533.1    KK400076    KFV59480.1    ADON01053384    ADON01053385    AADN05000009    AGTO01011165    KQ041519    KKF25848.1    NHOQ01001229    PWA26065.1    KK696691    KFQ24792.1    HADW01020362    HADX01002373    SBP24605.1    RJVU01059333    ROJ78905.1    HAEB01000849    SBQ47324.1    GFFV01000660    JAV39285.1    GL193845    EFB24524.1    AAEX03007556    JH880550    ELR60723.1    HAAF01001150    CCP72976.1    AANG04002548    CYRY02009931    VCW78129.1    AEYP01010098   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More
UP000037510    UP000027135    UP000078542    UP000036403    UP000078541    UP000235965    UP000007755    UP000078540    UP000005205    UP000078492    UP000053097    UP000279307    UP000002358    UP000215335    UP000076502    UP000005203    UP000007266    UP000242457    UP000075809    UP000192223    UP000019118    UP000054359    UP000094527    UP000183832    UP000192224    UP000261640    UP000001038    UP000265180    UP000197619    UP000257200    UP000016666    UP000000539    UP000016665    UP000265160    UP000189705    UP000264840    UP000265100    UP000261560    UP000261500    UP000002254    UP000252040    UP000007646    UP000002281    UP000245320    UP000265300    UP000248484    UP000248481    UP000011712    UP000248482    UP000286640    UP000189704    UP000248483    UP000009136    UP000000715    UP000233160    UP000245340    UP000286642    UP000286641    UP000261681    UP000242638    UP000002852   

PRIDE

H9JMA4    V5I1V1    L7M5Z0    E2R9K4   

Pfam

PF03810   IBN_N        + More
PF18777   CRM1_repeat
PF18784   CRM1_repeat_2
PF08389   Xpo1
PF08767   CRM1_C
PF18787   CRM1_repeat_3

Interpro

IPR041235   Exp1_repeat_2        + More
IPR011989   ARM-like       
IPR001494   Importin-beta_N       
IPR013598   Exportin-1/Importin-b-like       
IPR016024   ARM-type_fold       
IPR014877   XPO1_C_dom       
IPR040485   XPO1_repeat_3       
IPR041123   CRM1_repeat       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF48371   SSF48371        + More
SSF50978   SSF50978       

Gene 3D

1.25.10.10     2.130.10.10    

ProteinModelPortal

H9JMA4   A0A1E1WF48   A0A2A4J8R0   A0A0S2MU13   A0A212EH89   A0A0N1PJF4   + More
A0A194PNK6   S4PE76   A0A3S2L8T7   A0A0L7LSX2   A0A067R5K6   A0A151IP52   A0A0J7KFR1   A0A195FVZ2   A0A2J7R911   F4WNS6   A0A195B8P6   A0A158NW25   A0A195ECH5   A0A026WJN7   K7IQJ4   A0A232FE09   A0A154PI79   A0A0V0G423   A0A224XH56   A0A069DXT0   A0A087ZMS1   D6X0Q6   A0A0P4VTA0   A0A0T6AZF3   A0A1Y1MZ97   A0A2A3E6Y5   A0A0A9WM64   A0A0K8SDD3   A0A1B6DS12   A0A1B6JXF3   A0A151X7I5   A0A1W4XPR0   N6TJI2   A0A293MVZ7   A0A0P4WCE4   A0A0P4WHK7   A0A2R5L7Z6   A0A087TAY2   A0A1D2NK16   V5I1V1   A0A131YVA4   A0A1J1I615   A0A1W5A0P4   A0A3Q3S1N3   A0A3B3I741   A0A3P9LG22   L7M5Z0   A0A131XFJ1   A0A218URZ2   A0A093FS26   A0A3Q1EGB9   U3I8L1   A0A1D5P8H7   U3K8W1   A0A3P9CR46   A0A1U7RM64   A0A0F8B6D8   A0A3Q2W904   A0A315VUI3   A0A3P8PZM5   A0A091QE91   A0A1A7Y3Q1   A0A3N0XW18   A0A3B3B4I4   A0A1A8ELR3   A0A3B3VUG1   A0A250Y6Q4   D2HZX2   E2R9K4   A0A341C1V7   L8IXM5   G3TDG6   U6CR70   A0A3Q2I6B8   A0A2U4BZ49   A0A340XSA9   A0A2Y9EU68   A0A2Y9HZK7   M3VYZ8   A0A2Y9JG64   A0A3Q7RRM9   A0A3P4MAY6   A0A1U7TKR2   A0A2Y9QBU2   E1BE98   M3Y2G7   A0A2K6G794   A0A2U3VRC8   A0A3Q7VSE8   A0A3Q7NT77   A0A384AR15   A0A3B3UPB7   A0A3P9NZU7   A0A3B5R002  

PDB

3NC1     E-value=0,     Score=4160

KEGG

101740002    K14290 exportin-1 | (RefSeq) exportin-1

PATHWAY

03008    Ribosome biogenesis in eukaryotes - Bombyx mori (domestic silkworm)
03013    RNA transport - Bombyx mori (domestic silkworm)
04013    MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0005049   GO:0006886   GO:0008536   GO:0005634   GO:0005737   GO:0000056   GO:0046825   GO:0000055   GO:1990904   GO:0000776   GO:0005642   GO:0010824   GO:0042176   GO:0005829   GO:0034504   GO:0005730   GO:0031965   GO:0005488   GO:0016021   GO:0042626   GO:0007156   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

Subcellular location

Nucleus  

Length:

1058

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.877929999999997

Exp number, first 60 AAs:

0.00402

Total prob of N-in:

0.03759

outside

1  -  1058

 

 

Pi

2.318408

Theta

3.604918

Tajima's D

0.941066

CLR

0.928852

CSRT

0.67951602419879

Interpretation

Uncertain