SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07299
Annotation
transforming_growth_factor_beta_regulated_protein_1_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.615
 

Sequence

CDS
ATGTGTGCACAGTCATTTTCCAACATAGACTTAGGCAGCCAGAGCCAGATTGAAACTGATAGAAAAAAACGATGCCGAAAGAAATACAAATATATGAAAATGAAAATTAAGAGCTTAATATTGGAAAACGCAGCACTATGTGATGAGGTGGCCAAAATACAAGAGAGCATTCTGATTGTAAAAGATGAGAGAAAGTTTTTACTACATAAACTACTAGAATATGAAAATGATACTGAAAGTATTCATTCTAGTTATAGAAGTGATACTTTAGTTAATTTAAATGGACCTAAATCTAAAGTGAAAAAAAAACAAACTTTAGAAGATAGATAA
Protein
MCAQSFSNIDLGSQSQIETDRKKRCRKKYKYMKMKIKSLILENAALCDEVAKIQESILIVKDERKFLLHKLLEYENDTESIHSSYRSDTLVNLNGPKSKVKKKQTLEDR

Summary

Pfam
PF05965   FYRC        + More
PF05964   FYRN
Interpro
IPR040092   TBRG1        + More
IPR003888   FYrich_N       
IPR003889   FYrich_C       

Ontologies

Topology

Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0038
Exp number, first 60 AAs:
0.00379
Total prob of N-in:
0.29917
outside
1  -  109
 
 

Population Genetic Test Statistics

Pi
18.436798
Theta
20.701904
Tajima's D
-0.417247
CLR
0
CSRT
0.259737013149343
Interpretation
Uncertain
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