Gene

KWMTBOMO07295  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010653

Annotation

PREDICTED:_uncharacterized_protein_LOC106106714_[Papilio_polytes]

Location

Bomo_Chr12(+):10087018-10089354      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.149

CDS

ATGCTTCGAAATAATTTAAAAAATTTGATAAAAAGTTGTCGTAGTGTACAACTTCAAATAATAGATTCTGTTGGGACAAATCATATAATAACAAATCAAAGAAGATTTAAAAGTGACCTATATGAACCTGATTACCTGATTAGCTTACAACCTGATGAGCCAGTCTATGACTGTTTGAACTTGCAACTTAAAGGTTATGATTATGCTATATTGGAAGCGTGCCAAAGTCAGATCCATAGATATGCTGAAGTGATGGGATTACAAGTAGAGGACTGTTGGGCGACCCCTGCTCAGCAGTTAAAGGTACAACGGTTCAAGCCAGGTAGTACTGCTCTAGATGCTGAATACCAATTGAATATATATGAGCGCAATGTTCAGGTTGTTGATGTTCCTGCATGGGCTTTGGGTACTCTGCTTCGGGTATCAAGGGCTCTTTTACCGGAGGGATGCACTTTGAATGTTCATGAACACACTCCTGAACATGAAGAGATTAGATATGTGCCAGACAACCAACTTATTGATCTGAAACAGCAACTAGAAGGCATGGGTGGCAGTCGTGCCGATAAAAAGAAAAAGAGATAA

Protein

MLRNNLKNLIKSCRSVQLQIIDSVGTNHIITNQRRFKSDLYEPDYLISLQPDEPVYDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAWALGTLLRVSRALLPEGCTLNVHEHTPEHEEIRYVPDNQLIDLKQQLEGMGGSRADKKKKR

Uniprot

H9JMA0   A0A2H1VZ67   A0A2A4K2S0   A0A194PHC7   A0A212EJD1   A0A0N0PEP3   + More
I4DQ32   A0A0K8TT15   Q16W93   B4LTU9   A0A1B6LJ98   A0A2M3ZBW7   B4MW66   A0A2M4C0T0   A0A2M4C0V2   A0A023EGR2   A0A1A9ZIU1   A0A0L0C6Y4   A0A0M4DZT5   A0A1Q3FB65   A0A2S2NU69   A0A2M4AXR5   A0A2M4AXT8   A0A1W4VE14   B4KGC6   A0A2M4AXU6   A0A2M4AY26   A0A2S2QIK0   W5JDT0   B3MUA2   A0A1B6F3D4   B4P3K6   B4JAR7   A0A1A9VXL5   A0A1A9XDS5   A0A1B0B4M6   A0A034VH23   A0A3B0KB71   A0A1A9W1R4   C4WU99   B3N8W8   A0A1L8ECZ6   Q29MS9   D3TRG7   B4G8S6   A0A1L8E130   A0A1L8E106   A0A182PQC8   T1E8Y6   A0A2H8TM75   A0A182VCY0   A0A1I8MEE8   A0A1I8QCC3   A0A0K8VT04   A0A182KRE7   A0A182X3N7   A7URB7   A0A182I3D1   A0A182INU7   A0A182K442   Q9VQ35   B4IDB1   W8B2K8   A0A1Y1MN04   A0A2R7VX26   A0A0J9QTY8   A0A182QKH5   A0A182HBE7   A0A182U116   E9GLK0   A0A336MCA6   A0A1D2N342   A0A3R7PZX4   A0A182M046   A0A162CC62   A0A1B0GKG9   A0A0N8EJK3   A0A087T145   A0A0P5HU45   A0A084WND1   A0A226DAZ2   K7IUM6   B0WNR2   U4UPU0   A0A182FF66   A0A232FCT4   A0A182T7F3   A0A0P5HIN0   A0A0P5Q436   D2A319   A0A195BVM9   A0A182NHT2   A0A2J7RCX3   A0A195CPS4   A0A023G7C7   G3MS65   A0A023G4N8   A0A023FGC5   A0A1J1I9P5   E2B3D1  

Pubmed

19121390    26354079    22118469    22651552    26369729    17510324    + More
17994087    24945155    26108605    20920257    23761445    17550304    25348373    15632085    20353571    25315136    20966253    12364791    14747013    17210077    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    28004739    22936249    26483478    21292972    27289101    24438588    20075255    23537049    28648823    18362917    19820115    22216098    20798317   

EMBL

BABH01033361    BABH01033362    ODYU01005347    SOQ46097.1    NWSH01000241    PCG78073.1    + More
KQ459603    KPI92712.1    AGBW02014491    OWR41585.1    KQ459752    KPJ20196.1    AK403906    BAM20022.1    GDAI01000533    JAI17070.1    CH477572    EAT38858.1    CH940649    EDW64000.1    GEBQ01016222    JAT23755.1    GGFM01005293    MBW26044.1    CH963857    EDW75936.1    GGFJ01009795    MBW58936.1    GGFJ01009796    MBW58937.1    GAPW01005075    JAC08523.1    JRES01000827    KNC28030.1    CP012523    ALC38178.1    GFDL01010229    JAV24816.1    GGMR01008100    MBY20719.1    GGFK01012278    MBW45599.1    GGFK01012260    MBW45581.1    CH933807    EDW11113.1    GGFK01012279    MBW45600.1    GGFK01012385    MBW45706.1    GGMS01008354    MBY77557.1    ADMH02001806    ETN61050.1    CH902624    EDV33431.1    GECZ01025396    JAS44373.1    CM000157    EDW87273.1    CH916368    EDW03875.1    JXJN01008372    GAKP01017535    GAKP01017534    JAC41417.1    OUUW01000006    SPP82301.1    AK340976    BAH71469.1    CH954177    EDV57368.1    GFDG01002294    JAV16505.1    CH379060    EAL33614.2    CCAG010010432    EZ424019    ADD20295.1    CH479180    EDW28756.1    GFDF01001677    JAV12407.1    GFDF01001676    JAV12408.1    GAMD01001787    JAA99803.1    GFXV01003334    MBW15139.1    GDHF01010336    JAI41978.1    AAAB01008807    EDO64559.1    APCN01000205    AE014134    AY069759    AAF51347.1    AAL39904.1    AGB92415.1    CH480829    EDW45537.1    GAMC01011191    GAMC01011188    GAMC01011185    JAB95370.1    GEZM01026310    JAV87051.1    KK854135    PTY11889.1    CM002910    KMY87506.1    AXCN02000377    JXUM01031874    KQ560938    KXJ80266.1    GL732551    EFX79524.1    UFQT01000912    SSX27964.1    LJIJ01000262    ODM99696.1    QCYY01000826    ROT82415.1    AXCM01000691    LRGB01001005    KZS14012.1    AJWK01028865    GDIQ01020444    JAN74293.1    KK112918    KFM58834.1    GDIQ01228071    JAK23654.1    ATLV01024587    KE525352    KFB51725.1    LNIX01000025    OXA42712.1    AAZX01006018    DS232014    EDS31903.1    KB632390    ERL94513.1    NNAY01000458    OXU28259.1    GDIQ01232463    JAK19262.1    GDIQ01122154    JAL29572.1    KQ971338    EFA01967.1    KQ976401    KYM92632.1    NEVH01005883    PNF38672.1    KQ977444    KYN02743.1    GBBM01006638    JAC28780.1    JO844716    AEO36333.1    GBBM01006639    GBBM01006637    JAC28779.1    GBBK01003900    JAC20582.1    CVRI01000045    CRK96968.1    GL445323    EFN89809.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000008820    + More
UP000008792    UP000007798    UP000092445    UP000037069    UP000092553    UP000192221    UP000009192    UP000000673    UP000007801    UP000002282    UP000001070    UP000078200    UP000092443    UP000092460    UP000268350    UP000091820    UP000008711    UP000001819    UP000092444    UP000008744    UP000075885    UP000075903    UP000095301    UP000095300    UP000075882    UP000076407    UP000007062    UP000075840    UP000075880    UP000075881    UP000000803    UP000001292    UP000075886    UP000069940    UP000249989    UP000075902    UP000000305    UP000094527    UP000283509    UP000075883    UP000076858    UP000092461    UP000054359    UP000030765    UP000198287    UP000002358    UP000002320    UP000030742    UP000069272    UP000215335    UP000075901    UP000007266    UP000078540    UP000075884    UP000235965    UP000078542    UP000183832    UP000008237   

PRIDE

H9JMA0    Q9VQ35   

Pfam

PF00338   Ribosomal_S10        + More
PF13251   DUF4042

Interpro

IPR027486   Ribosomal_S10_dom        + More
IPR027487   Ribosomal_L48       
IPR036838   Ribosomal_S10_dom_sf       
IPR011989   ARM-like       
IPR016024   ARM-type_fold       
IPR025283   DUF4042       

SUPFAM

SSF54999   SSF54999        + More
SSF48371   SSF48371       

Gene 3D

3.30.70.600     1.25.10.10    

ProteinModelPortal

H9JMA0   A0A2H1VZ67   A0A2A4K2S0   A0A194PHC7   A0A212EJD1   A0A0N0PEP3   + More
I4DQ32   A0A0K8TT15   Q16W93   B4LTU9   A0A1B6LJ98   A0A2M3ZBW7   B4MW66   A0A2M4C0T0   A0A2M4C0V2   A0A023EGR2   A0A1A9ZIU1   A0A0L0C6Y4   A0A0M4DZT5   A0A1Q3FB65   A0A2S2NU69   A0A2M4AXR5   A0A2M4AXT8   A0A1W4VE14   B4KGC6   A0A2M4AXU6   A0A2M4AY26   A0A2S2QIK0   W5JDT0   B3MUA2   A0A1B6F3D4   B4P3K6   B4JAR7   A0A1A9VXL5   A0A1A9XDS5   A0A1B0B4M6   A0A034VH23   A0A3B0KB71   A0A1A9W1R4   C4WU99   B3N8W8   A0A1L8ECZ6   Q29MS9   D3TRG7   B4G8S6   A0A1L8E130   A0A1L8E106   A0A182PQC8   T1E8Y6   A0A2H8TM75   A0A182VCY0   A0A1I8MEE8   A0A1I8QCC3   A0A0K8VT04   A0A182KRE7   A0A182X3N7   A7URB7   A0A182I3D1   A0A182INU7   A0A182K442   Q9VQ35   B4IDB1   W8B2K8   A0A1Y1MN04   A0A2R7VX26   A0A0J9QTY8   A0A182QKH5   A0A182HBE7   A0A182U116   E9GLK0   A0A336MCA6   A0A1D2N342   A0A3R7PZX4   A0A182M046   A0A162CC62   A0A1B0GKG9   A0A0N8EJK3   A0A087T145   A0A0P5HU45   A0A084WND1   A0A226DAZ2   K7IUM6   B0WNR2   U4UPU0   A0A182FF66   A0A232FCT4   A0A182T7F3   A0A0P5HIN0   A0A0P5Q436   D2A319   A0A195BVM9   A0A182NHT2   A0A2J7RCX3   A0A195CPS4   A0A023G7C7   G3MS65   A0A023G4N8   A0A023FGC5   A0A1J1I9P5   E2B3D1  

PDB

6NU3     E-value=2.25678e-09,     Score=145

KEGG

101739219    K17429 large subunit ribosomal protein L48 | (RefSeq) uncharacterized LOC101739219

GO

GO:0005761   GO:0032543   GO:0005762   GO:0003735  

PANTHER

PTHR13473  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00323

Exp number, first 60 AAs:

0.00182

Total prob of N-in:

0.32054

outside

1  -  193

 

 

Pi

28.760568

Theta

24.866032

Tajima's D

0.493341

CLR

0

CSRT

0.52022398880056

Interpretation

Uncertain