SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07287
Pre Gene Modal
BGIBMGA010650
Annotation
PREDICTED:_condensin-2_complex_subunit_D3-like_[Plutella_xylostella]
Location in the cell
Mitochondrial   Reliability : 1.167 Nuclear   Reliability : 1.842
 

Sequence

CDS
ATGTCGTTCGACGCCCGCCAGCTGATCTACGACGTGATGCTGCAGCGCATGTCGCTGGTGCAGCGGCTGAACGCGCAGTGCCGGCTGGCGCGCGAGGTGCTGCAGCACGCGGCCGACCTCACGGACGAGGGCGCGGGCGAGCTGCCCCCCGCGCTGCACGCCGCGCTGCTCGACACCATCACCGTGCTCTGCGGCCCGCGCATGAAGCTACCCAGGAAACCAATGGCCAATGGCGAACCTGCGGACATTGACGATCTCCAGGAGCGGGTCACGACTAATATTGTTTCACATCTAACCGAGAACGAGAAGGTATTTTAA
Protein
MSFDARQLIYDVMLQRMSLVQRLNAQCRLAREVLQHAADLTDEGAGELPPALHAALLDTITVLCGPRMKLPRKPMANGEPADIDDLQERVTTNIVSHLTENEKVF

Summary

Pfam
PF12717   Cnd1
Interpro
IPR016024   ARM-type_fold        + More
IPR032682   Cnd1_C       
IPR026971   CND1/NCAPD3       
IPR011989   ARM-like       
SUPFAM
SSF48371   SSF48371       
Gene 3D

Ontologies

Topology

Length:
105
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02692
Exp number, first 60 AAs:
0.01862
Total prob of N-in:
0.21718
outside
1  -  105
 
 

Population Genetic Test Statistics

Pi
20.511939
Theta
19.338465
Tajima's D
0.141343
CLR
0.142949
CSRT
0.417979101044948
Interpretation
Uncertain
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