SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07285
Pre Gene Modal
BGIBMGA010650
Annotation
hypothetical_protein_KGM_16933_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 1.2
 

Sequence

CDS
ATGGCATCTTTACTTTACTACAAATTATTATCAATACCTGGCTACAAAGCCTATCACATATACCATTCACAAATTTTTGTGTTGTCATTAGCATGTCTTGGATTCCCAAAAGCTATGTGTGACAACGAATATAATTTTTTAAATGCGAAAGAGTTGACAAGAGAAGTTAACTCAGTAATTGATGGCTTAAAACAATTTGTCATGGTCCTGAAAATTGTGATAGAGCAATTACAACTAAATCCAAGTGATATGAACTTTGAAGATATTCTCAGCAACATGATTGACATTATTGGATGTGCTATAGTAAATAAATTAAATGTGGATAAAATTGAACTTGGTAAAGTTTCCAGTGTTATTTATGAAATGATAGATATTCTGCTATGTGATGTCAATAGAGAACCAAACCCAGCAGCCATCCGGTTGCTGTTCAAATGTTTACTTCCAAAATTTATTTCTGCCTCTACAGATTATCGTAGTGTAAATAATATTGTCAGAGCATCTTATGTAACATATTCAGGGCTATTATTAAGTAAATATGGAAAAGCAGCTCTACCTGGATACAGTGTACTTTTACAACATCTCTGCTATACATTAGAAGGCTTGGAGCGTGCAGAAGTGCGAAACTCCCGCGTTTCACTTATAGTAGGGTTGATGAGTCTTCTTCCAAAAAAATCTCACAGAAAAACAGTAAAATGGGTCCTTAAACTCTCTACAACCTCCAAAGTGGCACATAGACAAATTGCCATGGAAATTTTGTCAAATTTGTTAAGCAGTGATCTTGAAGAATCTAAACTAGAAAATGAAGACTCTCCAAAAAACAACCAGCCCAATGGTCAAGGTAACGAGAATGCGCACGATAACATAGAAAATGTAGCAGATAATGATGAAAATCAAGTAATTCATGAGAATGGAGCTCGTCCAGAAGATACTGTTACTACTGAAGATGAGAGTAGCCAAGACACATTCGTGGAGATTCCAGATCAAGAAGTGATAGAAGAAGACATGGCAGGTCTACTCCGGCAGCGTTCGCACACCGTGCGTCACTCCGAACTCCTGCGAGCGATATACGAACGGTTGAATGACGTGTCGAGCACGCTGCGCGCCCGAGCTTTTAGTATAATTACTGAGTGCGTTACCCACGAAAGACAACATGTGAGAGACGCCGTCAAGGAGGTGCAGGGCGCGCGCGGCGTGGCGTGCCGGCTGGTGGCGGCAGCGGCGCGCGGCGTGTGCGACGAGCGGGCCGCCGTGCGCCGTGCCGCGCTGTCGCTGCTGCAGCGCGTGCTGGCCGCGCACCACACCGCGCCCGTCGACGCAGATCTCGCGAGATCTACAACGTAA
Protein
MASLLYYKLLSIPGYKAYHIYHSQIFVLSLACLGFPKAMCDNEYNFLNAKELTREVNSVIDGLKQFVMVLKIVIEQLQLNPSDMNFEDILSNMIDIIGCAIVNKLNVDKIELGKVSSVIYEMIDILLCDVNREPNPAAIRLLFKCLLPKFISASTDYRSVNNIVRASYVTYSGLLLSKYGKAALPGYSVLLQHLCYTLEGLERAEVRNSRVSLIVGLMSLLPKKSHRKTVKWVLKLSTTSKVAHRQIAMEILSNLLSSDLEESKLENEDSPKNNQPNGQGNENAHDNIENVADNDENQVIHENGARPEDTVTTEDESSQDTFVEIPDQEVIEEDMAGLLRQRSHTVRHSELLRAIYERLNDVSSTLRARAFSIITECVTHERQHVRDAVKEVQGARGVACRLVAAAARGVCDERAAVRRAALSLLQRVLAAHHTAPVDADLARSTT

Summary

Pfam
PF12717   Cnd1
Interpro
IPR016024   ARM-type_fold        + More
IPR032682   Cnd1_C       
IPR026971   CND1/NCAPD3       
IPR011989   ARM-like       
IPR011030   Lipovitellin_superhlx_dom       
SUPFAM
SSF48371   SSF48371        + More
SSF48431   SSF48431       
Gene 3D

Ontologies

Topology

Length:
446
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.24395
Exp number, first 60 AAs:
0.22446
Total prob of N-in:
0.00882
outside
1  -  446
 
 

Population Genetic Test Statistics

Pi
18.169586
Theta
16.417254
Tajima's D
0.600611
CLR
0.619047
CSRT
0.548172591370432
Interpretation
Uncertain
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