SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07277
Pre Gene Modal
BGIBMGA010649
Annotation
Uncharacterized_protein_OBRU01_14198_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 3.476
 

Sequence

CDS
ATGAATTACCGCTTCATTTGGATTTTAATACTGATTGATACGTGCGCATCTGTTTTAGCGCACCCTATAACAGTTCAAGAAGAGCGAAATCACAATTCCGGACTGTTCTACACAGATGATTTGGCAACATCTAACAACGAAAATACGACTAAGATCCAAGATGAGAAAGTTATATCTGTTAGAATTACATCATCAATCGCCATTGGACGTTCTCAAAAAAAGTTAAACAGGCCTAATCCAAACGACAATGATTCGAACAAACAAGATTTTTTCAACGGGGTGACTGAATCTGACGAATCACAGTTAGCTTCCACAATGAGTATAATAGATGATATCGAATCATCCAGTTTACCAACACAGTTGGTAGGTGCTAATATAGAATTTATCAAACAACTTAACGCAAAAAAAGGAACTCGAGAGCACAGTATAGACAGTGTACGTCCCTTTGAATTGTTAAGTAAAAGTCAACCTTACAAAGAACAGGATTCCGCACTAAGCGACACACCATTTGAAAACGAAGAGAACATTGACGGTATTCCTTTAGCCAGAAAAATACCAACATCTCACGTTGCGAACAATTTTGAAACTAATAAACAAAATTCAAATAGTAGTTTTCATACGACCCAAGAATTATATCCTAGTATCACCGAACAAAACGATAACACAATGGGGTCGGATTTATCAGAAGTGAACGATGAAAGACTTTCTCGAAATATGACTTTCAGCTCACTATTTTCTTTGAATTCGCCGCATGTAATTGAAAATAATTCAACAATTCATGAAAGGAATCATAATCACACTGAAGACACTATAGCAGAGTCGTCTATCCAGTCTGCTGTAGAAATCAACCAAAACCAACAACCTACTCGTGACGAAGCCGTCTCCGAGTCTGATTATTTTCAGAGTGTGAGTAATTCTGTCAAACAAAACACAGCAAGCTTAACAACAGTTAGTTTTAATATTGTTCACGATGCGCCAAAAGGTGCGACTAGTTATGAAAATTCTTTAAAATACAATAACGGATTTGATGTTGCCCGAGAACAACAAACGTTTAATCTGCCAAGAATTTACAGTGAGCCAGCTAAAATCTACAGTGAACCTGCAAAGTTTTACAGTGAACCAGCCAAGATTTACAGTGAACCGGCCAAGGTATACAGCGAGCCGGCTAAAATTTATAGTGAACCTTCCAAAATTTACAGCGAACCTGCTAAATTTTACAGCCAACCTGCATCACTTCATTTAAGTGCGAGTGTTCCTCCCAATTTTTCAACATGGCAGCATCCTTCACAATCCGCCTTACTTGTTTCCTCAGATATTAACACTACGCCTCTGAGTACTGTAGGAACTTCCTTGAGTTTATCGAATGTGCAAAGATTCGATGGACAACAACCAGAAAAAAATTATAAGGTTGATGAAAAAACAAGCATAGCTACAAATGGCCGTAGCCATGGTGTTCAAGAATCTACGACGGAAAAATGCAAACAGGATAATTGTAAAGTAGGATATGTCGTAGAAGGTAGACAATTCAAAAAGTATAGAGTCGAAGAGAGGACCTCCGATGGGTTCATAGTTGGAGAATATGGTGTTGTGAGAAATGAAGACGGAGCCCTGCGCGGTGTGAGATACACGGCGGATAGCGATGCCAGCCCTCGGTTGATCTATGATGCACTTATGAAGTTCCTACAACTCAGATAA
Protein
MNYRFIWILILIDTCASVLAHPITVQEERNHNSGLFYTDDLATSNNENTTKIQDEKVISVRITSSIAIGRSQKKLNRPNPNDNDSNKQDFFNGVTESDESQLASTMSIIDDIESSSLPTQLVGANIEFIKQLNAKKGTREHSIDSVRPFELLSKSQPYKEQDSALSDTPFENEENIDGIPLARKIPTSHVANNFETNKQNSNSSFHTTQELYPSITEQNDNTMGSDLSEVNDERLSRNMTFSSLFSLNSPHVIENNSTIHERNHNHTEDTIAESSIQSAVEINQNQQPTRDEAVSESDYFQSVSNSVKQNTASLTTVSFNIVHDAPKGATSYENSLKYNNGFDVAREQQTFNLPRIYSEPAKIYSEPAKFYSEPAKIYSEPAKVYSEPAKIYSEPSKIYSEPAKFYSQPASLHLSASVPPNFSTWQHPSQSALLVSSDINTTPLSTVGTSLSLSNVQRFDGQQPEKNYKVDEKTSIATNGRSHGVQESTTEKCKQDNCKVGYVVEGRQFKKYRVEERTSDGFIVGEYGVVRNEDGALRGVRYTADSDASPRLIYDALMKFLQLR

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.987343
 
 
Length:
564
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.72166999999999
Exp number, first 60 AAs:
6.72142
Total prob of N-in:
0.32672
outside
1  -  564
 
 

Population Genetic Test Statistics

Pi
24.966129
Theta
24.875475
Tajima's D
0.016108
CLR
0.264744
CSRT
0.375881205939703
Interpretation
Uncertain
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