SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07272
Pre Gene Modal
BGIBMGA010643
Annotation
vesicular_glutamate_transporter_[Chilo_suppressalis]
Location in the cell
PlasmaMembrane   Reliability : 4.784
 

Sequence

CDS
ATGTACGATGGCGATGACCTGGAAACGCCACCATCACCGGACAGGCCCCCACCACGCCCCATAGATAAGTACGTCCGCGCACAATGCCCATGCCTGAGTGCGCGTTACACTGTAGCCCTGTTGGCTTGCTTCGGCTTCAGCATCATGTTCGGAATGCGCTGCAATATGAGTATGGCCAAACTGAAAATGACCGGAAAAGGGCGCAACGACACTGACGCACCATTTCAATGGACTCTCGAAATAGAATCGTCAATCGATTCATCGTACTTCGCCGGCTACCTCATCACTCAAGTGCCGGGCGGCTACTTAGCCTCCATGTATCCGGCCAACAAAATCTTCGGGGCTGCCATTGTGCTATCGGCATTGTTGAACATGGCGATTCCTGGCGCTATGTCTGTAGGCCCTGCGGCTGTGGTCATGTTAAAAATTGCTCAGGGATTCGTTGAAGGCGTTACATATCCTTCATGCCACGGAATCTGGAGGATGTGGGCACCTCCACTCGAGCGCTCTCGTTTGGCAACACTAGCATTTTGTGGGACATACGCTGGCATCGTTATTGGCATGCCATTGTCTGGGTTACTGGCAGATTACATTGGTTGGCAGGCGCCATTTTACTTTTATGGTACATTTGGAATTATTTGGTATGCGTGTTGGCTTTGGTTGGTGTTCGAGAAACCCAGTAAACATCCATGTATAACCGGGAAGGAACTGACGTATATTGAACAATCGCTTGGCACCGCCACCCAGGCCGCGATGCCAGGATTTTTTGCAACACCATGGAAAGCATTTGCCACATCTCCTCCAGTATACGCTATCATCGTCGCAAACTTCTGTAGGACTTGGAACTTCTGTTTACTGGTGATTTTCCAGTCTGCATACTTTAATTCCAGATTTAAAATGGAGATAACCGAGTCCGGTTTTGTGGGGGCGATTCCGCATTTGATCATGACGTCACTGGTGCCCATTGGAGGAATGCTCGCTGATTATTTACGTAAGAACAATATTATGACCACGACAAACGTGAGGAAGCTGTTTAACTGTGGTGGATTCGGTTTGGAGGCTTTCTTCTTCGTACTCGTCGCTTATGCCAATAACAAGTACGTAGCCACCATCGAGCTGACCCTTGGAGTAGCTTGCAGCGGTTTCGCCATATCAGGTTACAACGTCAATCATCTCGACATCGCTCCTCGATACGCCTCCATACTGATGGGTCTATCTAATGGCATCGGTACCATCGCTGGATTCCTTGTACCTATAGTCATCGACTACATGACCCAGGATAAGGATAAACAAGAGAAAGCTATAACCGAGTGGCGAGAAGTGTTCCTGATGGGTGCGACCGTACATTTCATTGGTATCACTATTTACGGTATCTTCGCTTCTGGCGAACTTCAGCCTTGGGCCGAGACTGGCTGTGAAGAGCCCACGACTTATTCCAAGTCTTTAGAACAAGAAACCACATTCACTGAGAAACCCTCAGCGCCTCTTAAGGGTTCGGAGGCGCCAGCTTACGGCGCGATAGTCCCGCAGCGGCCTATCGGCTTCGAGCAGCACGTTCCCAACAACCCATTCGTCTCAGGCGCCTACTATCAGACCGAGCAAGTGCAGCCTCCCACTGATCCCCACCAGAATCTCACCGATGACGGCACTTACTAA
Protein
MYDGDDLETPPSPDRPPPRPIDKYVRAQCPCLSARYTVALLACFGFSIMFGMRCNMSMAKLKMTGKGRNDTDAPFQWTLEIESSIDSSYFAGYLITQVPGGYLASMYPANKIFGAAIVLSALLNMAIPGAMSVGPAAVVMLKIAQGFVEGVTYPSCHGIWRMWAPPLERSRLATLAFCGTYAGIVIGMPLSGLLADYIGWQAPFYFYGTFGIIWYACWLWLVFEKPSKHPCITGKELTYIEQSLGTATQAAMPGFFATPWKAFATSPPVYAIIVANFCRTWNFCLLVIFQSAYFNSRFKMEITESGFVGAIPHLIMTSLVPIGGMLADYLRKNNIMTTTNVRKLFNCGGFGLEAFFFVLVAYANNKYVATIELTLGVACSGFAISGYNVNHLDIAPRYASILMGLSNGIGTIAGFLVPIVIDYMTQDKDKQEKAITEWREVFLMGATVHFIGITIYGIFASGELQPWAETGCEEPTTYSKSLEQETTFTEKPSAPLKGSEAPAYGAIVPQRPIGFEQHVPNNPFVSGAYYQTEQVQPPTDPHQNLTDDGTY

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
EMBL
BABH01033337    NWSH01003048    PCG67042.1    KP657652    AKL78877.1    RSAL01000165    + More
RVE45280.1    KQ460883    KPJ11118.1    ODYU01004240    SOQ43904.1    AGBW02011969    OWR45846.1    KQ459603    KPI92847.1    NEVH01021216    PNF19804.1    PYGN01000253    PSN50075.1    KQ981607    KYN39412.1    KQ981064    KYN09847.1    GL438827    EFN68334.1    AAAB01008964    EAA12373.4    APCN01002489    KQ434771    KZC03825.1    AXCM01004925    KK852649    KDR19506.1    AXCN02000795    KQ769844    OAD52786.1    AJVK01006112    AJVK01006113    AJWK01027119    AJWK01027120    AJWK01027121    AJWK01027122    ATLV01022947    KE525338    KFB48159.1    GL761987    EFZ22519.1    GANO01002716    JAB57155.1    ACPB03003652    DS235883    EEB20314.1    GL888625    EGI58764.1    KQ976687    KYM78140.1    CH477229    EAT47011.1    ADMH02000054    ETN67974.1    UFQT01000238    SSX22223.1    KQ982796    KYQ50598.1    JRES01000753    KNC28711.1    KK107098    EZA59694.1    JXJN01013742    JXJN01013743    KQ414731    KOC62398.1    CH963852    EDW75586.1    CP012523    ALC38224.1    CM000361    CM002910    EDX03463.1    KMY87671.1    AE014134    AAF51256.2    AFH03525.1    AGB92476.1    CH940649    EDW64121.1    GL448558    EFN84197.1    CH933807    EDW11149.1    CM000157    EDW87385.2    KQ977477    KYN02493.1    GBYB01001235    JAG71002.1    BT003440    AAO39443.1    CH954177    EDV57469.1    KQS69999.1    CH902620    EDV31741.1    KPU73603.1    ABLF02024600    ABLF02024601    ABLF02024602    ABLF02051428    CH479189    EDW25365.1    CH379061    EAL33032.2    KRT04683.1    KRT04684.1    KRT04685.1    GGMR01018093    MBY30712.1    GAMC01014278    JAB92277.1    CH480820    EDW53997.1    OUUW01000006    SPP81900.1    GGMS01006614    MBY75817.1    CVRI01000055    CRL01215.1    GACK01010038    JAA54996.1    GACK01001357    JAA63677.1    GEFH01003613    JAP64968.1    GACK01005048    JAA59986.1    DS231817    EDS39696.1    CH916368    EDW03906.1    GACK01001380    JAA63654.1    GGLE01001375    MBY05501.1    CH916976    EDW04703.1    GEGO01003364    JAR92040.1    GL732524    EFX89750.1    GDIP01131890    JAL71824.1    GDIP01211376    JAJ12026.1    GDIP01047835    JAM55880.1    GDIP01148988    JAJ74414.1   
Pfam
PF07690   MFS_1        + More
PF00151   Lipase
Interpro
IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR029058   AB_hydrolase       
IPR013818   Lipase/vitellogenin       
IPR033906   Lipase_N       
SUPFAM
SSF103473   SSF103473        + More
SSF53474   SSF53474       
Gene 3D
PDB
6E9N     E-value=5.03786e-10,     Score=156

Ontologies

Topology

Subcellular location
Secreted  
Length:
551
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
217.9608
Exp number, first 60 AAs:
21.28601
Total prob of N-in:
0.18310
POSSIBLE N-term signal
sequence
inside
1  -  30
TMhelix
31  -  53
outside
54  -  111
TMhelix
112  -  134
inside
135  -  171
TMhelix
172  -  194
outside
195  -  203
TMhelix
204  -  223
inside
224  -  271
TMhelix
272  -  294
outside
295  -  308
TMhelix
309  -  331
inside
332  -  343
TMhelix
344  -  363
outside
364  -  367
TMhelix
368  -  390
inside
391  -  398
TMhelix
399  -  421
outside
422  -  440
TMhelix
441  -  460
inside
461  -  551
 
 

Population Genetic Test Statistics

Pi
25.640277
Theta
26.42181
Tajima's D
-0.820982
CLR
1.035879
CSRT
0.171091445427729
Interpretation
Uncertain
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