Gene

KWMTBOMO07266

Pre Gene Modal

BGIBMGA010592

Annotation

PREDICTED:_synaptic_vesicle_2-related_protein-like_[Amyelois_transitella]

Location

Bomo_Chr12(-):9515231-9529801      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.944

CDS

ATGCGTCGTGCCAAAGGATATCAGGATTTAGATGAGAGTGGAATTGCGGTTCGGTCTTTAGCGCCACCGATGCCGCCTCCACAAGAAATTGAAATGGCCTCAGTAACTGTAGTCCCTGACGACACATTCACAGTAACACAAGCTGTAAATGCTCTAGGTTTCGGTTGGTTCCAAGTGAAGCTATCATTATGCACAGGGCTCTGTTGGATGGCAGACTCAATGGAGATGACAATTCTAAGTATACTGTCACCAGCTTTACACTGCGAATGGAATATAAGCAAATACCAACAAGCTCTCACTACCACAGTTGTATTCATGGGTATGATGCTAAGCTCAACATTCTGGGGAAACATTAGTGATAGATATGGCAGAAAAACTGCTCTTAGTATGTGTGGCGTGCTCCTGTTTTACTATGGCCTGCTTAGCTCAATAGCACCAAATTTTCTTTGGTTACTCTTTTTAAGAGGCTTAGTTGGTTTTGCTATTGGATGTGTGCCCCAGTCTGTCACGTTGTATGCTGAATTTTTGCCAACCAAACAAAGAGCCAAATGTGTAGTATTGTTGGATTGTTTCTGGGCGTTAGGAGCATGTTTAGAAGTGGCACTCGCATTAGTCGTTATGCCGACTCTCGGCGTTCACTGGCTACTCGCTCTGTCTACAATACCCTTGCTTATGTTCGCACTCATATGCCCTTGGCTGCCAGAGTCGGCTCGATTTCATGTGGCTAGCGGGGAAGCTGATAAAGCACTTGCTACTCTTGAACAAATTGCACAAGACAACGGTCGACCCATGTTACTTGGGCGTTTGGTGTGCGATGATTCTGTGGGCATAGGTCAACGGGGAAGATTGAAGCACTTGCTCATACCGCATCTGAGGAATACTAGCCTTCTGCTGTGGTTTATATGGATGTCCTGTGCCTTCTGTTACTACGGCTTAGTCCTGATGGCGACAGAGTTGTTCGAATCGAATCCTGGTGGACTGGAGGAAGCGTGTGCCGCTGACTGCAGGCCGCTTCAGACGACAGATTACATGGACCTATTGTGGACTACACTAGCAGAGTTCCCGGGTATTTTCGCGACAATATTCATTATCGAGAAATTCGGTCGCAAACGAACAATGGCGACGCAGTTCATAATATTCGCTTTGTGCGTCTGCGTGTTGATTTATAACTCTGATCGAACATTCCTCACTTGCATTTTGTTCCTGGCTCGGGGTATTATAGCTGGACTCTTCCAAGCGGCCTATGTTTACACTCCAGAGGTGTACCCCACAGCGCTGAGAGCGACAGCGGTGGGCGCGTGCAGCGGGGTCGCTCGACTGGGAGCCATGATCACGCCCTACGTGGCACAGGTGTTACTAAAGAACTCGGTGGCTATAGCGACCGGGGTGTACGCATTGGCGGCGGTCTTAGCTGCCTTTGCCTGTCTCGCTCTACCCATCGAGACGAAAGGGAGAGAGATGCGAGACACAGTGACGACAGCTTCTTAA

Protein

MRRAKGYQDLDESGIAVRSLAPPMPPPQEIEMASVTVVPDDTFTVTQAVNALGFGWFQVKLSLCTGLCWMADSMEMTILSILSPALHCEWNISKYQQALTTTVVFMGMMLSSTFWGNISDRYGRKTALSMCGVLLFYYGLLSSIAPNFLWLLFLRGLVGFAIGCVPQSVTLYAEFLPTKQRAKCVVLLDCFWALGACLEVALALVVMPTLGVHWLLALSTIPLLMFALICPWLPESARFHVASGEADKALATLEQIAQDNGRPMLLGRLVCDDSVGIGQRGRLKHLLIPHLRNTSLLLWFIWMSCAFCYYGLVLMATELFESNPGGLEEACAADCRPLQTTDYMDLLWTTLAEFPGIFATIFIIEKFGRKRTMATQFIIFALCVCVLIYNSDRTFLTCILFLARGIIAGLFQAAYVYTPEVYPTALRATAVGACSGVARLGAMITPYVAQVLLKNSVAIATGVYALAAVLAAFACLALPIETKGREMRDTVTTAS

Uniprot

A0A194PHF3   A0A2A4JH16   H9JM40   A0A2H1VK12   A0A3S2LW25   A0A212EWK7   + More
D6WME8   A0A1Y1KTK1   A0A194R0T7   A0A1W4WYI2   A0A067RC83   A0A2J7PKJ0   A0A1B6LHW8   A0A336M5F9   W5JKW5   A0A084VF85   E0VGL6   A0A182RB58   A0A182QAX0   A0A182XZG3   A0A182HEL0   A0A182FG00   A0A182WIU7   B0WVU0   A0A182NHG4   A0A182KRX4   A0A182P9W8   A0A182I3S5   A0A2M4BKD7   Q16J00   A0A2M4AG98   A0A2M4AGM2   A0A2M4AFE9   A0A182X6H2   A0A182UQJ5   A0A182U4H9   Q7QJU4   A0A2M4BJK8   A0A1B0CUK4   A0A182JWA3   A0A2H8TZP2   J9JQN7   K7ITS9   A0A1J1J878   A0A1B6F660   T1GU02   F4WBQ3   A0A195FSZ1   A0A154PB27   A0A158NRG9   A0A0L7R142   E2BC75   V9ICG1   A0A195DIE4   A0A195C2V6   A0A151XHQ0   E2AXE4   A0A195BE54   A0A026VT93   E9H0K8   A0A0P4W790   A0A310SYV4   A0A0P4XJC1   A0A0P6DTQ1   A0A0P4Y2S2   A0A0A1WGK5   A0A0P6B7D6   A0A0K8V205   A0A0P6HGN0   A0A2A3EH41   V9IER5   B4MQT2   T1JBX0   A0A1S3I3N1   A0A1S3I3K1   F6XK47   B4GCH3   B4QBG8   A0A210PRM8   Q290B2   A0A2C9KJL3   A0A2Y9ICP1   A0A3Q7QER9   A0A1S3EZG9   A0A3Q7RJG0   B4I8Z2   Q8SYM5   M3XWG3   A0A383ZYD4   U6CVY6   A0A0P6GNR7   G1MDL0   M3X573   A0A096MNK0   A0A341B6G6   A0A0A9ZAP7   A0A2M4AMX6   A0A340WFC1   A0A2U4CKZ7   A0A2Y9SMD7  

Pubmed

26354079    19121390    22118469    18362917    19820115    28004739    + More
24845553    20920257    23761445    24438588    20566863    25244985    26483478    20966253    17510324    12364791    20075255    21719571    21347285    20798317    24508170    30249741    21292972    25830018    17994087    16341006    22936249    28812685    15632085    23185243    15562597    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20010809    17975172    25401762   

EMBL

KQ459603    KPI92841.1    NWSH01001485    PCG71109.1    BABH01039932    BABH01039933    + More
BABH01039934    BABH01039935    ODYU01002725    SOQ40584.1    RSAL01000165    RVE45284.1    AGBW02011969    OWR45851.1    KQ971343    EFA03313.2    GEZM01075870    JAV63908.1    KQ460883    KPJ11124.1    KK852732    KDR17464.1    NEVH01024540    PNF16829.1    GEBQ01016665    JAT23312.1    UFQT01000369    SSX23607.1    ADMH02001234    ETN63555.1    ATLV01012365    ATLV01012366    KE524785    KFB36629.1    DS235149    EEB12522.1    AXCN02000591    JXUM01035613    JXUM01035614    JXUM01035615    KQ561067    KXJ79813.1    DS232132    EDS35772.1    APCN01000220    GGFJ01004117    MBW53258.1    CH478040    EAT34254.1    GGFK01006436    MBW39757.1    GGFK01006612    MBW39933.1    GGFK01006198    MBW39519.1    AAAB01008807    EAA04631.3    GGFJ01004118    MBW53259.1    AJWK01029294    AJWK01029295    GFXV01007575    MBW19380.1    ABLF02025352    CVRI01000075    CRL08603.1    GECZ01024105    JAS45664.1    CAQQ02037815    CAQQ02037816    GL888066    EGI68331.1    KQ981280    KYN43417.1    KQ434850    KZC08584.1    ADTU01023989    KQ414668    KOC64568.1    GL447256    EFN86702.1    JR039728    AEY58818.1    KQ980824    KYN12602.1    KQ978317    KYM95194.1    KQ982123    KYQ59877.1    GL443548    EFN61924.1    KQ976511    KYM82477.1    KK108116    QOIP01000005    EZA46890.1    RLU22617.1    GL732581    EFX74666.1    GDRN01077457    JAI62739.1    KQ759767    OAD62967.1    GDIP01240486    JAI82915.1    GDIQ01072510    LRGB01001005    JAN22227.1    KZS14128.1    GDIP01233437    JAI89964.1    GBXI01016662    JAC97629.1    GDIP01020932    JAM82783.1    GDHF01019516    JAI32798.1    GDIQ01019087    JAN75650.1    KZ288254    PBC30784.1    JR039729    AEY58819.1    CH963849    EDW74471.1    JH432025    AAEX03014752    CH479181    EDW32450.1    CM000362    CM002911    EDX08486.1    KMY96214.1    NEDP02005541    OWF39141.1    CM000071    EAL25450.1    KRT02234.1    CH480824    EDW57067.1    AE013599    AY071447    AAF47135.2    AAL49069.1    AEYP01095843    AEYP01095844    AEYP01095845    AEYP01095846    AEYP01095847    HAAF01002633    CCP74459.1    GDIQ01041219    JAN53518.1    ACTA01107918    ACTA01115918    AANG04002472    AHZZ02002942    AHZZ02002943    AHZZ02002944    GBHO01038454    GBHO01003176    JAG05150.1    JAG40428.1    GGFK01008637    MBW41958.1   

Proteomes

UP000053268    UP000218220    UP000005204    UP000283053    UP000007151    UP000007266    + More
UP000053240    UP000192223    UP000027135    UP000235965    UP000000673    UP000030765    UP000009046    UP000075900    UP000075886    UP000076408    UP000069940    UP000249989    UP000069272    UP000075920    UP000002320    UP000075884    UP000075882    UP000075885    UP000075840    UP000008820    UP000076407    UP000075903    UP000075902    UP000007062    UP000092461    UP000075881    UP000007819    UP000002358    UP000183832    UP000015102    UP000007755    UP000078541    UP000076502    UP000005205    UP000053825    UP000008237    UP000078492    UP000078542    UP000075809    UP000000311    UP000078540    UP000053097    UP000279307    UP000000305    UP000076858    UP000242457    UP000007798    UP000085678    UP000002254    UP000008744    UP000000304    UP000242188    UP000001819    UP000076420    UP000248481    UP000286641    UP000081671    UP000286640    UP000001292    UP000000803    UP000000715    UP000261681    UP000008912    UP000011712    UP000028761    UP000252040    UP000265300    UP000245320   

PRIDE

H9JM40    Q8SYM5   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr
PF02114   Phosducin

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
IPR005828   MFS_sugar_transport-like       
IPR024253   Phosducin_thioredoxin-like_dom       
IPR036249   Thioredoxin-like_sf       
IPR004749   Orgcat_transp/SVOP       

SUPFAM

SSF103473   SSF103473        + More
SSF52833   SSF52833       

CDD

cd06174  MFS

ProteinModelPortal

A0A194PHF3   A0A2A4JH16   H9JM40   A0A2H1VK12   A0A3S2LW25   A0A212EWK7   + More
D6WME8   A0A1Y1KTK1   A0A194R0T7   A0A1W4WYI2   A0A067RC83   A0A2J7PKJ0   A0A1B6LHW8   A0A336M5F9   W5JKW5   A0A084VF85   E0VGL6   A0A182RB58   A0A182QAX0   A0A182XZG3   A0A182HEL0   A0A182FG00   A0A182WIU7   B0WVU0   A0A182NHG4   A0A182KRX4   A0A182P9W8   A0A182I3S5   A0A2M4BKD7   Q16J00   A0A2M4AG98   A0A2M4AGM2   A0A2M4AFE9   A0A182X6H2   A0A182UQJ5   A0A182U4H9   Q7QJU4   A0A2M4BJK8   A0A1B0CUK4   A0A182JWA3   A0A2H8TZP2   J9JQN7   K7ITS9   A0A1J1J878   A0A1B6F660   T1GU02   F4WBQ3   A0A195FSZ1   A0A154PB27   A0A158NRG9   A0A0L7R142   E2BC75   V9ICG1   A0A195DIE4   A0A195C2V6   A0A151XHQ0   E2AXE4   A0A195BE54   A0A026VT93   E9H0K8   A0A0P4W790   A0A310SYV4   A0A0P4XJC1   A0A0P6DTQ1   A0A0P4Y2S2   A0A0A1WGK5   A0A0P6B7D6   A0A0K8V205   A0A0P6HGN0   A0A2A3EH41   V9IER5   B4MQT2   T1JBX0   A0A1S3I3N1   A0A1S3I3K1   F6XK47   B4GCH3   B4QBG8   A0A210PRM8   Q290B2   A0A2C9KJL3   A0A2Y9ICP1   A0A3Q7QER9   A0A1S3EZG9   A0A3Q7RJG0   B4I8Z2   Q8SYM5   M3XWG3   A0A383ZYD4   U6CVY6   A0A0P6GNR7   G1MDL0   M3X573   A0A096MNK0   A0A341B6G6   A0A0A9ZAP7   A0A2M4AMX6   A0A340WFC1   A0A2U4CKZ7   A0A2Y9SMD7  

PDB

4J05     E-value=9.01542e-11,     Score=162

KEGG

101743177    no KO assigned | (RefSeq) synaptic vesicle 2-related protein

GO

GO:0055085   GO:0016021   GO:0022857   GO:0008643   GO:0005215   GO:0030170   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

Length:

495

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

237.51897

Exp number, first 60 AAs:

6.20433

Total prob of N-in:

0.85683

inside

1  -  126

TMhelix

127  -  146

outside

147  -  150

TMhelix

151  -  173

inside

174  -  184

TMhelix

185  -  207

outside

208  -  210

TMhelix

211  -  233

inside

234  -  294

TMhelix

295  -  317

outside

318  -  371

TMhelix

372  -  389

inside

390  -  393

TMhelix

394  -  416

outside

417  -  457

TMhelix

458  -  480

inside

481  -  495

 

 

Pi

25.185749

Theta

21.173469

Tajima's D

-1.428878

CLR

0.86466

CSRT

0.0660466976651167

Interpretation

Uncertain