Gene

KWMTBOMO07259

Annotation

PREDICTED:_cilia-_and_flagella-associated_protein_44-like_[Bombyx_mori]

Location

Bomo_Chr12(-):9200835-9210090      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.564

CDS

ATGGCACAAACATTTACTGGACTGAAACTGAAAGGGGAACTTGGTAGATTCGGTAAAACGGAAATTTGCGATGTGCTTGGAGTTTATCCAATGCCTGATGAAAAGGTACTATCTGGATGCGAGTGGGGTAATGTTTTGGTGTGGGAAGCAGGACTAGTAAAGTTAGAAGTTACTCAGCGTGGAAGGAAAAGTTGCCATTCGGCACCAGTGGACGGCAATGGTGGAATTTGGACTGTTGAGCTAGAGATAGATAAAATAGAATGCGATCACCAAAAAGTCATGACCTGTCACGCCGGTGGTGTAGTTGCCATGGCAGCTTTGAGGACACATCCAATTTTAATCACGGCTGGTGAAGATGGAGCTTTGCACGCATATTGCACAGAGACTTACGCGTTGTTGGCTCGTTTCCAGTTTCCGACACCTATTACATGTATGCTGTATCCACCAGAAGAGGTGGATGAAACTTCGCGGATCTTAATAGTAGGCTTCACGGATGGGATAATGCGGCATTTATTACTTCACCCAGAACATTTACTATCGCGTTCTAGTATAGTAGAATTGAAGGTGGATTCTACACTTACAATTCACAGCGAAGATAGAGAAACCGACGTAGTGGATTTGATTTCGCTATGGAAGCCTCATTCAAAAGCCATAACACAGATAACGATAAATGAGCAACATACATTACTGGTAACATGTGGACAGGATTGTACTATATTCATGTATAAACTTGAAGCAGGAATTCCTTTTAAATTACAAAGACTCGGATTTATTGAAACTCCAAACAATATCGCCTACATGACATGGAAACCCGAAGAGGAACGTGTATTACTTTTATGTGGTCAAGTTGGTTTCATTATGGAAGCAGTGCTACCTGACGTGAACGTTAACAAATACAGTGACATAACCACATTCAAACTAAATTTCGTATCTTTCAAAGAGACTCTTGTCAAAAAACACTTTATGCGTAACCGCCCTTTCCCCGCTGAAGAAGATCTTGCCAGTCTTGACGAAGAAGCTCTCAAAGCGAAAGAAGAAGCTGAAAAAGATGACGATGACGAAGAAGAATGGATCGGAGAAATAGAACTCATGGAAAGCGAAAGTATGCTTGGAACGACTGTGACTTGGGCGAAATATTCCGAGGAAGGTGTATGGGTAATTCAAAAAGGGACCGGAGCATTGTTATTAGTGAATCCTGGCGTTAACAAAATTTTCAAGTACGGTCCAATTCCAGGGGCATGGTGCGATGATATAACGACTTTGAAGTTCATATGTGATGGTCGATACCTGCTTCTTGGTACGAATACTGGTTACATTCGTGTTGTAAGAATGCCGACCGAAGACGAAGACACTCCGGAACGTCACTACATGACTTGGATGATGGCTCAACAGAAAATGCTGAAAAAACTCAAAGGCAGGCGGTTGGCAAAAGAAGAGCCTCAACCAACACCTCGTTTAGATTTCACAGATAATTACTACTTGCCTATGCATGATAGATACACAGGTGCTATCACCTGTTTCGAGTTTAGTGCCGATGGAAATTATTTATATTCAAGTGGCACTGATGGAAATATTTTCGTGTACACAGTAAATTTTCCAGAACCACTGATAGAACAATCGAAAACACCACTAATACCGGAATTACCTAAAATTACAAAGATAAAAGAACCTAGTACAGCGGACGGTGAATTAATGTCTCATGAAGAATTGAAACAAAAGGAAGAATATGATAAAATGATGGCTATAGCAAATGCTCATAAAAAGCGTGTCAGAGATCATCTGGCCGAACTTACTGCCGAGTATAATAAACTAATTAAAGCAAACCGCAATTTACCGGCATCCCAACAAATCGACGTAACTCTCGACCCACGTCCTCTAGAAGTACAAGAAAAGGAGCTAGATGAAGCAAAAGCATTGACTAGGAGAAAACTCGCTCATCAACTTGAAGCTTCAGACTTGGCACTTCACAAGATGTACTCCAGGAATATTATACAAGTGGACGTGTTCCCTTTCACTTTAAAAGCTATCAGAGATCCAAAAGTAATGATTAGACCGCTACGACAGAAGAATTTATCAAAAGAATTTCAAAAGCAACTCGACGAGGTACACGAAAAAATGGCTGAGGCTGCATTACGTGGAAGGGATATGAATTTATTGGAAATGGTAGAGGTTCAACTGAAGTAA

Protein

MAQTFTGLKLKGELGRFGKTEICDVLGVYPMPDEKVLSGCEWGNVLVWEAGLVKLEVTQRGRKSCHSAPVDGNGGIWTVELEIDKIECDHQKVMTCHAGGVVAMAALRTHPILITAGEDGALHAYCTETYALLARFQFPTPITCMLYPPEEVDETSRILIVGFTDGIMRHLLLHPEHLLSRSSIVELKVDSTLTIHSEDRETDVVDLISLWKPHSKAITQITINEQHTLLVTCGQDCTIFMYKLEAGIPFKLQRLGFIETPNNIAYMTWKPEEERVLLLCGQVGFIMEAVLPDVNVNKYSDITTFKLNFVSFKETLVKKHFMRNRPFPAEEDLASLDEEALKAKEEAEKDDDDEEEWIGEIELMESESMLGTTVTWAKYSEEGVWVIQKGTGALLLVNPGVNKIFKYGPIPGAWCDDITTLKFICDGRYLLLGTNTGYIRVVRMPTEDEDTPERHYMTWMMAQQKMLKKLKGRRLAKEEPQPTPRLDFTDNYYLPMHDRYTGAITCFEFSADGNYLYSSGTDGNIFVYTVNFPEPLIEQSKTPLIPELPKITKIKEPSTADGELMSHEELKQKEEYDKMMAIANAHKKRVRDHLAELTAEYNKLIKANRNLPASQQIDVTLDPRPLEVQEKELDEAKALTRRKLAHQLEASDLALHKMYSRNIIQVDVFPFTLKAIRDPKVMIRPLRQKNLSKEFQKQLDEVHEKMAEAALRGRDMNLLEMVEVQLK

Uniprot

A0A212FG35   A0A194PHN9   A0A2A4JET3   A0A2W1BXC2   A0A194R0A7   A0A2W1BWV3   + More
A0A2H1V1P1   A0A2A4J1E8   H9JLF6   A0A0L7KUU7   A0A182JXN7   A0A182UCZ9   A0A182YNL4   A0A182X206   A0A182V315   A0A182I669   A0A182PHV4   Q7QI93   A0A182L485   A0A182QBJ2   A0A182RRE6   A0A182N7M8   A0A182MIL0   A0A182WI99   A0A084WLI8   A0A182FI42   W5JQC4   A0A1J1HPB5   A0A182GD23   A0A1B6FQT9   A0A1J1HPI5   B4MDG6   A0A088A766   A0A158NY21   U4UPT3   A0A1W4WLU2   A0A336MUJ4   A0A0M8ZS25   E0VZG7   A0A2A3E6I3   A0A1Q3FSX6   W8B1E0   A0A3B3DC54  

Pubmed

22118469    26354079    28756777    19121390    26227816    25244985    + More
12364791    14747013    17210077    20966253    24438588    20920257    23761445    26483478    17994087    21347285    23537049    20566863    24495485    29451363   

EMBL

AGBW02008720    OWR52701.1    KQ459603    KPI92832.1    NWSH01001728    PCG70329.1    + More
KZ149959    PZC76403.1    KQ460883    KPJ11132.1    KZ149911    PZC78125.1    ODYU01000280    SOQ34765.1    NWSH01004301    PCG65242.1    BABH01005845    BABH01005846    BABH01005847    BABH01005848    JTDY01005604    KOB66841.1    APCN01003569    AAAB01008807    EAA04725.4    AXCN02000581    AXCM01001601    ATLV01024245    KE525350    KFB51082.1    ADMH02000632    ETN65493.1    CVRI01000014    CRK89887.1    JXUM01009519    JXUM01009520    KQ560285    KXJ83284.1    GECZ01017260    JAS52509.1    CRK89875.1    CH940661    EDW71227.1    ADTU01002913    KB632390    ERL94503.1    UFQS01002617    UFQT01002617    SSX14369.1    SSX33780.1    KQ435916    KOX68796.1    DS235852    EEB18773.1    KZ288353    PBC27318.1    GFDL01004335    JAV30710.1    GAMC01014243    JAB92312.1   

Proteomes

UP000007151    UP000053268    UP000218220    UP000053240    UP000005204    UP000037510    + More
UP000075881    UP000075902    UP000076408    UP000076407    UP000075903    UP000075840    UP000075885    UP000007062    UP000075882    UP000075886    UP000075900    UP000075884    UP000075883    UP000075920    UP000030765    UP000069272    UP000000673    UP000183832    UP000069940    UP000249989    UP000008792    UP000005203    UP000005205    UP000030742    UP000192223    UP000053105    UP000009046    UP000242457    UP000261560   

PRIDE

H9JLF6   

Pfam

PF00400   WD40

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011041   Quinoprot_gluc/sorb_DH       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A212FG35   A0A194PHN9   A0A2A4JET3   A0A2W1BXC2   A0A194R0A7   A0A2W1BWV3   + More
A0A2H1V1P1   A0A2A4J1E8   H9JLF6   A0A0L7KUU7   A0A182JXN7   A0A182UCZ9   A0A182YNL4   A0A182X206   A0A182V315   A0A182I669   A0A182PHV4   Q7QI93   A0A182L485   A0A182QBJ2   A0A182RRE6   A0A182N7M8   A0A182MIL0   A0A182WI99   A0A084WLI8   A0A182FI42   W5JQC4   A0A1J1HPB5   A0A182GD23   A0A1B6FQT9   A0A1J1HPI5   B4MDG6   A0A088A766   A0A158NY21   U4UPT3   A0A1W4WLU2   A0A336MUJ4   A0A0M8ZS25   E0VZG7   A0A2A3E6I3   A0A1Q3FSX6   W8B1E0   A0A3B3DC54  

KEGG

105842105    no KO assigned | (RefSeq) cilia- and flagella-associated protein 44-like

GO

GO:0060271   GO:0060285   GO:0007288   GO:0005930   GO:0003824   GO:0005515   GO:0005096   GO:0051056   GO:0030170   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

Length:

727

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01377

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00074

outside

1  -  727

 

 

Pi

3.315437

Theta

7.183897

Tajima's D

-1.997812

CLR

0.583838

CSRT

0.0129993500324984

Interpretation

Uncertain