Silkworm Genome Informatics Database

Gene

KWMTBOMO07257

Pre Gene Modal

BGIBMGA010357

Annotation

PREDICTED:_uncharacterized_protein_LOC106135217_[Amyelois_transitella]

Location

Bomo_Chr12(-):9189312-9190790 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.83 Nuclear Reliability : 2.266

CDS

ATGTACCTACACGAGCGACATAGTGAGCTCGAGAAGAAATATCTGCAGTCCGTTGAACGTTACTCGGAGCGTCTGCGTTTGGCTGCAGCGCTTCAAGCCGATGTCTTACCACAAAAGCCTTTTAAAGACCCAACAGAAATGGCTGGAGGTTATAAGCCGGCACAGTACAAAAGGGACGTGGTCCGTCTGCGCATCATACGTTCAGAGCAACTCCAACAAATACATGCTCTTCGAGAGGAAATTAAAAGACTGCGTCTGAAACCATTGTCCCAGCCAACGCCACCACCCACGGTGACGTCACCGGAGAGCGATCGTTCTCACATCAATCTATTTTTAGTTCCGCGATCTACGAAGCCTCGACATAAATATTTTCCAACGTAA

Protein

MYLHERHSELEKKYLQSVERYSERLRLAAALQADVLPQKPFKDPTEMAGGYKPAQYKRDVVRLRIIRSEQLQQIHALREEIKRLRLKPLSQPTPPPTVTSPESDRSHINLFLVPRSTKPRHKYFPT

Uniprot

H9JLF6 A0A194PHN9 A0A2W1BXC2 A0A212FG35 A0A2H1VUZ2 A0A2A4JC20 + More
A0A2A4JET3 A0A2W1BWV3

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01005845 BABH01005846 BABH01005847 BABH01005848 KQ459603 KPI92832.1 + More
KZ149959 PZC76403.1 AGBW02008720 OWR52701.1 ODYU01004601 SOQ44657.1 NWSH01002022 PCG69399.1 NWSH01001728 PCG70329.1 KZ149911 PZC78125.1

Proteomes

UP000005204 UP000053268 UP000007151 UP000218220

PRIDE

H9JLF6

Pfam

PF00400 WD40

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf
IPR001680   WD40_repeat
IPR017986   WD40_repeat_dom
IPR011047   Quinoprotein_ADH-like_supfam

SUPFAM

SSF50978 SSF50978 + More
SSF50998 SSF50998

Gene 3D

2.130.10.10

ProteinModelPortal

H9JLF6 A0A194PHN9 A0A2W1BXC2 A0A212FG35 A0A2H1VUZ2 A0A2A4JC20 + More
A0A2A4JET3 A0A2W1BWV3

KEGG

101736102 no KO assigned | (RefSeq) cilia- and flagella-associated protein 44-like

GO

Length:

126

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14739

outside

1 - 126

Pi

12.049822

Theta

13.187924

Tajima's D

-0.316273

CLR

0.677524

CSRT

0.289535523223839

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics