Gene

KWMTBOMO07247  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010588

Annotation

H+_transporting_ATP_synthase_delta_subunit_[Bombyx_mori]

Location

Bomo_Chr12(+):9026991-9029733      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.791

CDS

ATGGCACTGGCATTCCGTGGTGTAATCAGAAATGTAGCTCGTCGGCTTCAAGTACGTAACTATGCAGATGCTCCCAAAGGTGACGAAATGGCATTGACCTTCGCTGCGGGTAATAAGGTCTTTTATGACAAACAAGTTGTCAAACAAATTGATGTACCATCATTTAGTGGTGCTTTTGGTATCTTACCTAAACACGTACCTACCCTGGCTGTTCTTAGACCTGGTGTTGTTACAATTCTTGAAAATGATGGGAAACAGAATAAAATCTTCGTATCGTCTGGCACAATTACAGTAAATGATGACTCCTCAGTTCAGGTTTTAGCCGAAGAGGCTCACCCTCTGGAGAGCATTGACCGTAGTGCTGCACAGGAGGCCCTCAGTAAAGCACAGTCTGAATTCAATTCTGCTTCTAATGAAAAGGCTAAAGCTGAAGCTGCTATTGCTCTAGAAGTAGCTGAAGAGATTGTGAAGGCTGCATCTGCGTAA

Protein

MALAFRGVIRNVARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQSEFNSASNEKAKAEAAIALEVAEEIVKAASA

Uniprot

Q1HQ34   A0A194R1M3   A0A2H1VA11   I4DN05   I4DJ87   Q5MGP7   + More
A0A2W1BST9   A0A2A4JHC9   A0A194PIE8   A0A3S2P226   S4NMX1   A0A336KXP7   A0A232EQS0   D6WNL2   E9I937   V5I9G1   A0A088AHV3   A0A2A3EA88   V9IKG8   A0A0K8TPE6   A0A151I243   A0A182JD00   A0A154NZJ1   A0A182W9Y8   A0A158NG24   A0A1J1HSS8   A0A182JTW4   A0A182QUP3   A0A1B6H198   A0A0J7NQ69   A0A1B6FZI8   A0A1B6JAZ1   A0A182P0H6   A0A182IEL1   A0A1S4GWD4   A0A182V6J7   A0A182UGZ6   A0A182WTI0   A0A182L2D6   Q7PNG6   J3JW62   A0A151XBC9   A0A310SBU4   A0A026VYH1   A0A026WIB6   A0A1Q3FJD4   A0A3Q0J2R9   A0A0M9A6D1   A0A182YKW5   A0A182SNK5   A0A1S3D4R1   A0A182R3B2   A0A2J7PWH3   B0WYE7   E2BMY9   A0A195F0R3   K7J447   A0A0P4VUG0   R4G8C3   A0A195E713   A0A1B0CAD3   A0A224XYC0   A0A0V0G4B2   A0A1L8E0M3   A0A067RCX9   E2A9J2   A0A1W4XKK8   A0A1B0EXQ7   A0A2P8Z2L9   A0A2S2Q0V8   A0A023F868   F4WTL2   A0A2M4A883   A0A1A9X3A7   A0A1B6EB44   A0A1B6C446   A0A161MDX5   A0A2M4C1Z6   A0A0A1XJK8   D1FPL2   B3MZL6   A0A1Y1MM15   A0A0M3QYZ4   U4U0R7   T1E770   A0A2M4C1Z3   A0A2M3Z256   A0A3B0JCU5   W8BUU2   W5JXC4   C4WSI1   A0A182FJU0   J9K2M7   B4PXG5   A0A2H8U0K5   A0A2S2P3X4   A0A1W4VV65  

Pubmed

19121390    26354079    22651552    16023793    28756777    23622113    + More
28648823    18362917    19820115    21282665    26369729    21347285    12364791    20966253    22516182    23537049    24508170    30249741    25244985    20798317    20075255    27129103    24845553    29403074    25474469    21719571    25830018    20441151    17994087    28004739    24495485    20920257    23761445    17550304   

EMBL

BABH01005835    DQ443218    ABF51307.1    KQ460883    KPJ11140.1    ODYU01001259    + More
SOQ37222.1    AK402673    BAM19295.1    AK401355    BAM17977.1    AY829739    AAV91353.1    KZ149911    PZC78119.1    NWSH01001519    PCG70994.1    KQ459603    KPI92823.1    RSAL01000001    RVE55132.1    GAIX01014191    JAA78369.1    UFQS01001175    UFQS01001201    UFQT01001175    UFQT01001201    SSX09420.1    SSX09703.1    SSX29321.1    NNAY01002733    OXU20667.1    KQ971342    EFA04639.1    GL761674    EFZ22922.1    GALX01002995    JAB65471.1    KZ288310    PBC28610.1    JR048944    AEY60809.1    GDAI01001341    JAI16262.1    KQ976580    KYM79924.1    KQ434786    KZC05085.1    ADTU01014940    CVRI01000020    CRK91128.1    AXCN02000610    GECZ01001342    JAS68427.1    LBMM01002631    KMQ94565.1    GECZ01014164    JAS55605.1    GECU01011513    JAS96193.1    APCN01005209    AAAB01008964    EAA12214.5    APGK01016340    APGK01026055    APGK01026056    BT127480    KB740613    KB739824    AEE62442.1    ENN79996.1    ENN82108.1    KQ982335    KYQ57629.1    KQ794714    OAD47026.1    KK107750    QOIP01000012    EZA47909.1    RLU16007.1    KK107185    EZA55792.1    GFDL01007407    JAV27638.1    KQ435726    KOX78160.1    NEVH01020933    PNF20683.1    DS232187    EDS37024.1    GL449382    EFN82893.1    KQ981864    KYN34170.1    AAZX01007151    GDKW01000413    JAI56182.1    ACPB03021503    GAHY01001222    JAA76288.1    KQ979568    KYN20978.1    AJWK01003674    GFTR01002854    JAW13572.1    GECL01003249    JAP02875.1    GFDF01001791    JAV12293.1    KK852584    KDR20848.1    GL437917    EFN69882.1    AJVK01033225    PYGN01000224    PSN50752.1    GGMS01002205    MBY71408.1    GBBI01001201    JAC17511.1    GL888341    EGI62433.1    GGFK01003686    MBW37007.1    GEDC01022451    GEDC01002132    JAS14847.1    JAS35166.1    GEDC01029134    JAS08164.1    GEMB01000486    JAS02641.1    GGFJ01010174    MBW59315.1    GBXI01003160    JAD11132.1    EZ419762    ACY69935.1    CH902635    EDV33817.1    GEZM01027480    JAV86723.1    CP012528    ALC48533.1    KB630508    KB631064    KB631065    ERL83640.1    ERL84055.1    ERL84057.1    GAMD01003307    JAA98283.1    GGFJ01010172    MBW59313.1    GGFM01001858    MBW22609.1    OUUW01000003    SPP77922.1    GAMC01001435    JAC05121.1    ADMH02000011    ETN68094.1    AK340198    BAH70851.1    ABLF02013658    CM000162    EDX02916.1    GFXV01007756    MBW19561.1    GGMR01011423    MBY24042.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000283053    UP000215335    + More
UP000007266    UP000005203    UP000242457    UP000078540    UP000075880    UP000076502    UP000075920    UP000005205    UP000183832    UP000075881    UP000075886    UP000036403    UP000075885    UP000075840    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000019118    UP000075809    UP000053097    UP000279307    UP000079169    UP000053105    UP000076408    UP000075901    UP000075900    UP000235965    UP000002320    UP000008237    UP000078541    UP000002358    UP000015103    UP000078492    UP000092461    UP000027135    UP000000311    UP000192223    UP000092462    UP000245037    UP000007755    UP000091820    UP000007801    UP000092553    UP000030742    UP000268350    UP000000673    UP000069272    UP000007819    UP000002282    UP000192221   

PRIDE

Q1HQ34    A0A088AHV3   

Pfam

PF02823   ATP-synt_DE_N

Interpro

IPR001469   ATP_synth_F1_dsu/esu        + More
IPR036771   ATPsynth_dsu/esu_N       
IPR036794   ATP_F1_dsu/esu_C_sf       
IPR020546   ATP_synth_F1_dsu/esu_N       

SUPFAM

SSF46604   SSF46604        + More
SSF51344   SSF51344       

Gene 3D

2.60.15.10    

CDD

cd12152  F1-ATPase_delta

ProteinModelPortal

Q1HQ34   A0A194R1M3   A0A2H1VA11   I4DN05   I4DJ87   Q5MGP7   + More
A0A2W1BST9   A0A2A4JHC9   A0A194PIE8   A0A3S2P226   S4NMX1   A0A336KXP7   A0A232EQS0   D6WNL2   E9I937   V5I9G1   A0A088AHV3   A0A2A3EA88   V9IKG8   A0A0K8TPE6   A0A151I243   A0A182JD00   A0A154NZJ1   A0A182W9Y8   A0A158NG24   A0A1J1HSS8   A0A182JTW4   A0A182QUP3   A0A1B6H198   A0A0J7NQ69   A0A1B6FZI8   A0A1B6JAZ1   A0A182P0H6   A0A182IEL1   A0A1S4GWD4   A0A182V6J7   A0A182UGZ6   A0A182WTI0   A0A182L2D6   Q7PNG6   J3JW62   A0A151XBC9   A0A310SBU4   A0A026VYH1   A0A026WIB6   A0A1Q3FJD4   A0A3Q0J2R9   A0A0M9A6D1   A0A182YKW5   A0A182SNK5   A0A1S3D4R1   A0A182R3B2   A0A2J7PWH3   B0WYE7   E2BMY9   A0A195F0R3   K7J447   A0A0P4VUG0   R4G8C3   A0A195E713   A0A1B0CAD3   A0A224XYC0   A0A0V0G4B2   A0A1L8E0M3   A0A067RCX9   E2A9J2   A0A1W4XKK8   A0A1B0EXQ7   A0A2P8Z2L9   A0A2S2Q0V8   A0A023F868   F4WTL2   A0A2M4A883   A0A1A9X3A7   A0A1B6EB44   A0A1B6C446   A0A161MDX5   A0A2M4C1Z6   A0A0A1XJK8   D1FPL2   B3MZL6   A0A1Y1MM15   A0A0M3QYZ4   U4U0R7   T1E770   A0A2M4C1Z3   A0A2M3Z256   A0A3B0JCU5   W8BUU2   W5JXC4   C4WSI1   A0A182FJU0   J9K2M7   B4PXG5   A0A2H8U0K5   A0A2S2P3X4   A0A1W4VV65  

PDB

2W6J     E-value=6.15413e-25,     Score=277

KEGG

100101165    K02134 F-type H+-transporting ATPase subunit delta | (RefSeq) H+ transporting ATP synthase delta sub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0046933   GO:0015986   GO:0045261   GO:0000275   GO:0016021   GO:0008270   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

PANTHER

PTHR13822  

Length:

161

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00971

Exp number, first 60 AAs:

0.00291

Total prob of N-in:

0.09755

outside

1  -  161

 

 

Pi

0.210938

Theta

2.269351

Tajima's D

-2.192294

CLR

1180.873863

CSRT

0.00169991500424979

Interpretation

Possibly Positive selection