SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07246
Pre Gene Modal
BGIBMGA010364
Annotation
PREDICTED:_uncharacterized_protein_LOC106132400_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.832
 

Sequence

CDS
ATGTTAATTGAGGATTTAGATATCAATTTATTATCCCAACTGGTTACGGAGCAAATTGATCAAGTCACTTGCTTGGAATGCTGTAAGTACTATGTTGCACCTGAAACAGCTTCTTGTGGGCATTCATTATGTCATTTATGTTGGAAAAAAAGACGTACTTGCCCTATTTGTGCTACGCTGCTCGAACGTCGATCTGCAAAATTGAACAGACCTTTACACACCCTGACTGAACATGTACAAAATTTAGGCAATGCATTTGAGAAGCTTTTCAAAACTAAACTAGATGAATTTACACTGGAAACACCAAAACAACCTGGATTTATAAATGACCCAATTGATAATGTCAAAGAGTGGCTTGCCAGTTCTCAAAACCAGTTCACAAATTCAGCTTTAAACTCAGGACAATCATCACAAGACACAGTCAAGATTGTTAATAAAGAATTGTCCGCAAATGAATTTCAAGTTCATACTAAAGTCAATACTGTGAAAAATTGTTCAGTAGTGGTTCCGGCACCAGCAGCTCAAGATGACTGGGACAAGATTGAAGTTATGCCAGATTCTGATGCATACATAAATAAAGAAAACATTGCAGGCCCAATGGACATTGAGCCATTTTCAATTGAAGACCAAGAATACACTACACAGAACCCTCGCAGAAGTTCCAGAATGAGGGATCTGAATATTAGTAGCAATAATGCTAAAACAGAAAATAACAATGCACTTGCTTTAAAACAAAACAAAGAAACAAATTCTGATATAGAAAAAAATTCCATAGTAGTGAAACAGAATTGGAATAATGTTAAAAGAATGAGAAAAGAATTTAGTAAATTGAACAAAAAAAACAGAAACAAATTAAATGTTTCGATTGAAATGGCTAAGAAAACTCAAATTTCAAATAAACAAGAAAATATAATTGATATGAAAGATATACAGGAATTAAACTGTGAAATTGATGAAAACACTCCAAACATTGAAAGTACTTTTGAAACTGCTGTTAACGATAAATCAATGTCTAATCAAAATGATGCTCAAGAAAGTGAACCTATCAACTACGATGTAATTATGGATCAAGTATTTGCAAACATTGATGCTGATATAGAAGATACAAGAAAAATAAAAACTGTCAAAGAAGCTTCCAACTTACTAGAAAAGACTGTAGAAAATCATACAACCGCTACACAAGATCAATTTATTAGTAAAACTCAGAGATCAATTGTGGAATGCTTCACCACTGACAAAACACTGGCCAATTCCCAAACAGTGAATGAAAATAAAAATCAAAAGGATAGTGAAAATATATTTTCTGTTTGTGAAAATCATACTGAATTTCAAAAGACAACCAATAGTGAAATGCCAGATACAGTACATAAGCACATGGAAGATACACTAACACCTGCCCTGTCTCAAAATGTCAAAACACCACTAGAATGCTTGAAAGCCAGTGACGACGACTGCGACAGTGTTGTGGAAGAGACACCACAAAAATGTCACTCGTTCAACAAAGGAAAACAAAAGGAGAATTCAACTGTGAAAGAATGTGATCTTGGAACAGATCTGAAGCAAATCAAAAGTGTTATTAATTTAACAGACACGGCTGAAACTAATGAGAGCAAAGATGTAACCGTGGTTAATACAAATACTAAGAAACAGACCCTTGACACCCCGTTGACTATAAATAAGTTTGTCGATCAAATCAAACACAAGTCCACACCAATGGCAAGAAAGTCTTTAAACTTCGAGAGTGAGCAAATCAATGTTAATGATGATCCAGAACAGACATTTTGTCCTCCAACGGAAGCGCTTCCGGAAAACACCCAGGAAAAAGAATTTATGAAGAAAATTTTCGACAAATCTCAGACCACACAGATAGCAAGAGCTCTGGGTTCCTGTAACTCAATGCTTAATAATAAAGATTTTTGTGTCGCGGGATCTTGTTTGACATCAGCTGAACTTAAAAAACTCAAAGTCCTCTGCTCTGAAAATAAATGGTGCTACGTAGATAAATATACAAATAATTTAACACATTTAGTTGTTGGCGTTGATGAAGAGAAAAAATCACAAAGATCTGTTAAATACATGTGTGCTTTGGCGGCAGGCAAATGGATAGTTTCATTTGAGTGGGTGGAAAAGTGCTTGCATCTTAAGAAATATGTCGACGAGGCACCCTATGAAGCTCTGGACAGCACGGGGGAGCCCGGACCGAAGCGGTCGCGTATCTCGAAACGGAAGCTATTCCATGGAATCACATTCTACTGTATGCCGTCATTTACCGTACTAGATCTTCAAACTCTAAAGAGCATGCTGGAAGCCGCAGGTGGCCGTGTCGTGACTGATCCGAAATATGTTCGTATTAGTAAGGACGCACCTGGTCCCGCCTTACTACTTGCCGAGCCCGAGAATACGCAAGAGGATCGTTTCATATACCTCGCAATGGAGCAGAGCATCGTACCAGTTAACTACGAGTGGGCGCTAAATTGTCTCGGCAGTTATACTTTGGGGTCAGTTCAAGAACTGTTACTTTGTCCGGCGGCGCTGCTGCCGACGTTGACTTCACAATGGCCTGCTTGTTTAATAGCTCGCGAATATGATGACTAA
Protein
MLIEDLDINLLSQLVTEQIDQVTCLECCKYYVAPETASCGHSLCHLCWKKRRTCPICATLLERRSAKLNRPLHTLTEHVQNLGNAFEKLFKTKLDEFTLETPKQPGFINDPIDNVKEWLASSQNQFTNSALNSGQSSQDTVKIVNKELSANEFQVHTKVNTVKNCSVVVPAPAAQDDWDKIEVMPDSDAYINKENIAGPMDIEPFSIEDQEYTTQNPRRSSRMRDLNISSNNAKTENNNALALKQNKETNSDIEKNSIVVKQNWNNVKRMRKEFSKLNKKNRNKLNVSIEMAKKTQISNKQENIIDMKDIQELNCEIDENTPNIESTFETAVNDKSMSNQNDAQESEPINYDVIMDQVFANIDADIEDTRKIKTVKEASNLLEKTVENHTTATQDQFISKTQRSIVECFTTDKTLANSQTVNENKNQKDSENIFSVCENHTEFQKTTNSEMPDTVHKHMEDTLTPALSQNVKTPLECLKASDDDCDSVVEETPQKCHSFNKGKQKENSTVKECDLGTDLKQIKSVINLTDTAETNESKDVTVVNTNTKKQTLDTPLTINKFVDQIKHKSTPMARKSLNFESEQINVNDDPEQTFCPPTEALPENTQEKEFMKKIFDKSQTTQIARALGSCNSMLNNKDFCVAGSCLTSAELKKLKVLCSENKWCYVDKYTNNLTHLVVGVDEEKKSQRSVKYMCALAAGKWIVSFEWVEKCLHLKKYVDEAPYEALDSTGEPGPKRSRISKRKLFHGITFYCMPSFTVLDLQTLKSMLEAAGGRVVTDPKYVRISKDAPGPALLLAEPENTQEDRFIYLAMEQSIVPVNYEWALNCLGSYTLGSVQELLLCPAALLPTLTSQWPACLIAREYDD

Summary

Uniprot
ProteinModelPortal
PDB
1L0B     E-value=6.59165e-17,     Score=217

Ontologies

Topology

Length:
864
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02834
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  864
 
 

Population Genetic Test Statistics

Pi
0.169189
Theta
2.05764
Tajima's D
-1.948603
CLR
710.890264
CSRT
0.0101994900254987
Interpretation
Possibly Positive selection
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