SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07243
Pre Gene Modal
BGIBMGA010585
Annotation
hypothetical_protein_KGM_20561_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 4.95
 

Sequence

CDS
ATGAGCGATGAAAAACAGCCACTCCTAACTGGACCAAACAGTCCAGAAAATGTAATTGAAATACAATCAACCGAACCAGTGATAAATGATGATGGTCCTTCAACTGAGAAAACAAAAGGCGACTATTGCCCTGCATCAGAAAGGTGTTTAGAATATCCAACATCAAACTTTGATACAATGATTCATCTTCTTAAAGGTAATATAGGAACGGGGATACTAGCTATGCCTGACGCCTTCAAAAATGCGGGACTTATTTTTGGTGTATTTTGCACATTGATTATGGGTGCTATGTGCACTCATTGCATGCACATATTAGTACAGTGTTCTCATGAACTATGCATAAGAAGTGAAAAACCAGCTTTGAGCTTCTCCGAAGTTATTGAGGACTCGTTTTTGTCAGGACCGATTGTATTTCGACCATATGCAAAGAAAATGAGGGCATTAGTCAATATATTTCTCGTTATAACGCAACTGGGATTTTGCTGTGTGTATTTTTTATTTGTCGCTACTAACCTTCAAGATACAATGCATTTATTTCGTATAAATCTAAGCGTACATTTGTACCTGACTCTGTTATTTCCGCTAATCGTCGCATTAGCTATGGTAAAAAATTTAAAATATTTAACACCAGTGTCTCTGGTGGCATCCATAATGACAGCTTGGGGCCTAGCTATCACGTTCTACTATATTCTTCAAGATTTGCCGCACTCTAAAGAAGTGAACCCGATAGCCACATGGCACCAGTTACCATTGTATTTCGGTACAGCAATATATGCGTTCGAAGGAATTGGAGTGGTATTACCTCTGGAAAATAACATGAAAACTCCTGAAGACTTTGGTGGATGGAACGGCGTTCTGAACACGGGTATGGTCATAGTGGCAGCTCTGTACACCGCAGTTGGATTCTTTGGTTATTTAAAATACGGAGACAGCGTCCAAGGTAGCATAACTCTGAATTTACCGAATACTTTATTGGCCCAAAGCGTTCGTTTTGTGATGGCAGCTGCTATATTTTTGTCTTACGGCCTTCAATTTTACGTGCCAATGAACATTGTTTGGCCCTACGTGAAATCTAAGCTTTCATCGGAAAATGCTTTAAAGCACGGCGAGGCGATGACCCGTATCGCCCTAATTTCAATAACGTTTTTGGCTGCAGCGATGATTCCGAACTTGAGTGGAATAATTTCATTGGTTGGCGCGTTCAGTAGCTCTGCGCTCGCACTCATATTTCCACCACTGATCGAGATCATGACGTTTTGGCCGGATCAGCTCGGGAAAAACGATTGGAAATTTTGGAAAGATATCGTCATTATTGTTTTCGGTGTAACAGGTTTCCTGTTCGGTACTTATACTAGTATAGAGAATATATTAATAAAATCTTAA
Protein
MSDEKQPLLTGPNSPENVIEIQSTEPVINDDGPSTEKTKGDYCPASERCLEYPTSNFDTMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEKPALSFSEVIEDSFLSGPIVFRPYAKKMRALVNIFLVITQLGFCCVYFLFVATNLQDTMHLFRINLSVHLYLTLLFPLIVALAMVKNLKYLTPVSLVASIMTAWGLAITFYYILQDLPHSKEVNPIATWHQLPLYFGTAIYAFEGIGVVLPLENNMKTPEDFGGWNGVLNTGMVIVAALYTAVGFFGYLKYGDSVQGSITLNLPNTLLAQSVRFVMAAAIFLSYGLQFYVPMNIVWPYVKSKLSSENALKHGEAMTRIALISITFLAAAMIPNLSGIISLVGAFSSSALALIFPPLIEIMTFWPDQLGKNDWKFWKDIVIIVFGVTGFLFGTYTSIENILIKS

Summary

EMBL
AGBW02008720    OWR52705.1    GDQN01006832    JAT84222.1    ODYU01001259    SOQ37218.1    + More
KQ459603    KPI92817.1    GFDF01009195    JAV04889.1    GFDF01009550    JAV04534.1    GFDF01009329    JAV04755.1    CH477236    EAT46644.1    EAT46643.1    GGFL01002225    MBW66403.1    AAAB01008964    EAA12852.4    ADMH02000447    ETN66434.1    DS231860    EDS39315.1    APCN01000752    GGFK01009939    MBW43260.1    GGFJ01004725    MBW53866.1    GGFM01002052    MBW22803.1    GGFK01010145    MBW43466.1    ATLV01014417    KE524970    KFB38701.1    AXCN02000747    GFDL01011696    JAV23349.1    GAPW01000931    JAC12667.1    GFDL01011749    JAV23296.1    JXUM01075159    KQ562872    KXJ74957.1    GFDL01011695    JAV23350.1    GFDL01011549    JAV23496.1    JXUM01088613    KQ563713    KXJ73450.1    AJWK01025074    AJWK01025075    UFQS01000097    UFQT01000097    SSW99387.1    SSX19767.1    KY921806    ART29395.1    SSW99386.1    SSX19766.1    KQ971338    KYB28192.1    KK852674    KDR18729.1    AXCM01001953    NEVH01005887    PNF38368.1    CVRI01000058    CRL02568.1    GEZM01086058    JAV59808.1    GEZM01086059    JAV59807.1    LJIG01022599    KRT79718.1    GEDC01027855    JAS09443.1    GBXI01008578    JAD05714.1    GBXI01017532    GBXI01011781    JAC96759.1    JAD02511.1    GAMC01014701    JAB91854.1    GEDC01020919    JAS16379.1    GAMC01014700    JAB91855.1    PYGN01002063    PSN31633.1    GAMC01014702    JAB91853.1    GAKP01021297    JAC37655.1    GDHF01032132    GDHF01028702    GDHF01003172    JAI20182.1    JAI23612.1    JAI49142.1    GECZ01029278    GECZ01027150    GECZ01006892    JAS40491.1    JAS42619.1    JAS62877.1    GECZ01029306    GECZ01024403    GECZ01023598    GECZ01022704    GECZ01015813    GECZ01006021    JAS40463.1    JAS45366.1    JAS46171.1    JAS47065.1    JAS53956.1    JAS63748.1    GECZ01029704    GECZ01028042    GECZ01016209    GECZ01002500    JAS40065.1    JAS41727.1    JAS53560.1    JAS67269.1    CH954177    KQS70770.1    KQS70771.1    KQS70772.1    EDV59356.1    AE014134    AAF52661.1    AAN10663.1    AAN10664.1    ADV36973.1    ADV36974.1    BT125875    ADV15454.1    CM000157    KRJ97871.1    CM002910    KMY89069.1    CH379058    EDY69824.1    CH479184    EDW36901.1    KRJ97870.1    KRJ97874.1    AY118648    AAM50017.1    AAS64738.1    KMY89073.1    KMY89072.1    AAF52662.2    KRJ97872.1    KMY89070.1    CH902620    KPU73250.1    KRT03594.1    KRT03593.1    BT125876    AAF52663.1    ADV15455.1    ADV36975.1    EDW88511.1    KRJ97873.1    GDHF01032920    GDHF01007449    JAI19394.1    JAI44865.1    OUUW01000010    SPP86230.1   
Pfam
PF01490   Aa_trans
Interpro
IPR013057   AA_transpt_TM       

Ontologies

Topology

Length:
460
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
204.87802
Exp number, first 60 AAs:
0.01219
Total prob of N-in:
0.04677
outside
1  -  83
TMhelix
84  -  106
inside
107  -  146
TMhelix
147  -  169
outside
170  -  178
TMhelix
179  -  201
inside
202  -  207
TMhelix
208  -  230
outside
231  -  244
TMhelix
245  -  267
inside
268  -  278
TMhelix
279  -  301
outside
302  -  331
TMhelix
332  -  354
inside
355  -  374
TMhelix
375  -  397
outside
398  -  434
TMhelix
435  -  457
inside
458  -  460
 
 

Population Genetic Test Statistics

Pi
0.876469
Theta
5.67485
Tajima's D
-2.487546
CLR
596.992769
CSRT
0.000199990000499975
Interpretation
Possibly Positive selection
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